RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 FFAR2O15552 330 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 PHGDHO43175 533 aaKnown RBP6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 TADA3O75528 432 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 MBD4O95243 580 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 IL18RAPO95256 599 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 FTLP02792 175 aaPredicted RBP6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 MMEP08473 750 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 GLB1P16278 677 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 COPB2P35606 906 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 MCAMP43121 646 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 HK3P52790 923 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 ARL4CP56559 192 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 HERVK_113P62684 666 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 CDK17Q00537 523 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 FOXO1Q12778 655 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 DAG1Q14118 895 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 SPIDRQ14159 915 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 STARD3Q14849 445 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 NKPD1Q17RQ9 610 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 SLC35G1Q2M3R5 365 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 TTC38Q5R3I4 469 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 HLA-DQA1Q5Y7H0 255 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 TIGD7Q6NT04 549 aaPredicted RBP6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 OGFOD3Q6PK18 319 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 RFX8Q6ZV50 586 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 LIX1LQ8IVB5 337 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 ARMC10Q8N2F6 343 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 SLC30A5Q8TAD4 765 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 KAT5Q92993 513 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 FATE1Q969F0 183 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 HDAC10Q969S8 669 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 RMDN3Q96TC7 470 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 PLVAPQ9BX97 442 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 MAGEH1Q9H213 219 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 C14orf93Q9H972 538 aaKnown RBP6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 HDAC9Q9UKV0 1011 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 U3KQE9 123 aa6.26□□□□□ -1.41
TM9SF3-202ENST00000443638 SSU72P8A0A1W2PR75 194 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 GNAT3A8MTJ3 354 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 ISM1B1AKI9 464 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 GOLGA6L22H0YM25 854 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 TCERG1O14776 1098 aaKnown RBP6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 MAFKO60675 156 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 SKAP2O75563 359 aaPredicted RBP6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 BAIAP3O94812 1187 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 PRLP01236 227 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 CELA2BP08218 269 aaPredicted RBP6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 HARSP12081 509 aaKnown RBP6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 BMP3P12645 472 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 ALDH9A1P49189 494 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 FMO1Q01740 532 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 PPP3CAQ08209 521 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 TRIM28Q13263 835 aaKnown RBP6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 CNGB1Q14028 1251 aaPredicted RBP6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 THEMIS2Q5TEJ8 643 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 BTBD8Q5XKL5 378 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 THAP5Q7Z6K1 395 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 KRT77Q7Z794 578 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 SESTD1Q86VW0 696 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 RBM12BQ8IXT5 1001 aaKnown RBP6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 OR2I1PQ8NGU4 316 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 OR14C36Q8NHC7 312 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 DPF2Q92785 391 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 DDX11Q96FC9 970 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 STK33Q9BYT3 514 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.25□□□□□ -1.413e-6■■□□□ 13.8
TM9SF3-202ENST00000443638 CNTD2Q9H8S5 307 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 BLOC1S4Q9NUP1 217 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 DENND2AQ9ULE3 1009 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 WASF3Q9UPY6 502 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 TMEM98Q9Y2Y6 226 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 ASB1Q9Y576 335 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 NUB1Q9Y5A7 615 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 USP19O94966 1318 aa6.25□□□□□ -1.41
TM9SF3-202ENST00000443638 GOLGA6L3A6NEY3 463 aa6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 PRAMEF25A6NGN4 478 aa6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 FAM155AB1AL88 458 aaPredicted RBP6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 ACOT7O00154 380 aa6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 EIF3FO00303 357 aaPredicted RBP6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 APOL1O14791 398 aa6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 SLC27A2O14975 620 aa6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 AREL1O15033 823 aa6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 FUCA1P04066 466 aa6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 CCT2P78371 535 aaKnown RBP6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 HTRA4P83105 476 aaPredicted RBP6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 MGAT2Q10469 447 aa6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 NOGQ13253 232 aa6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 PDE1CQ14123 709 aaPredicted RBP6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 FGL2Q14314 439 aa6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 POSTNQ15063 836 aa6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 CNGA2Q16280 664 aa6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 CCDC96Q2M329 555 aa6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 ZACNQ401N2 412 aa6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 VPS53Q5VIR6 699 aa6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 STEAP3Q658P3 488 aa6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 PAOXQ6QHF9 649 aa6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 LYPD4Q6UWN0 246 aa6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 TMTC1Q8IUR5 882 aa6.24□□□□□ -1.41
TM9SF3-202ENST00000443638 COLGALT2Q8IYK4 626 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms