RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 CWH43Q9H720 699 aa19.56■□□□□ 0.72
NUP50-208ENST00000430547 XPNPEP1Q9NQW7 623 aa19.56■□□□□ 0.72
NUP50-208ENST00000430547 FAM105AQ9NUU6 356 aa19.56■□□□□ 0.72
NUP50-208ENST00000430547 RNF19AQ9NV58 838 aa19.56■□□□□ 0.72
NUP50-208ENST00000430547 MED24O75448 989 aa19.55■□□□□ 0.72
NUP50-208ENST00000430547 CD2BP2O95400 341 aaKnown RBP19.55■□□□□ 0.72
NUP50-208ENST00000430547 SPATA31C1P0DKV0 1188 aa19.55■□□□□ 0.72
NUP50-208ENST00000430547 ATF7P17544 494 aaPredicted RBP19.55■□□□□ 0.72
NUP50-208ENST00000430547 DNAJB1P25685 340 aa19.55■□□□□ 0.72
NUP50-208ENST00000430547 GJB2P29033 226 aa19.55■□□□□ 0.72
NUP50-208ENST00000430547 NCBP1Q09161 790 aaKnown RBP19.55■□□□□ 0.72
NUP50-208ENST00000430547 CAMK1Q14012 370 aa19.55■□□□□ 0.72
NUP50-208ENST00000430547 NBR1Q14596 966 aa19.55■□□□□ 0.72
NUP50-208ENST00000430547 PCBP1Q15365 356 aaKnown RBP eCLIP19.55■□□□□ 0.72
NUP50-208ENST00000430547 PUS10Q3MIT2 529 aaKnown RBP19.55■□□□□ 0.72
NUP50-208ENST00000430547 GLB1LQ6UWU2 654 aa19.55■□□□□ 0.72
NUP50-208ENST00000430547 PGBD4Q96DM1 585 aa19.55■□□□□ 0.72
NUP50-208ENST00000430547 NECAB3Q96P71 396 aaPredicted RBP19.55■□□□□ 0.72
NUP50-208ENST00000430547 TLR9Q9NR96 1032 aa19.55■□□□□ 0.72
NUP50-208ENST00000430547 PUF60Q9UHX1 559 aaKnown RBP19.55■□□□□ 0.72
NUP50-208ENST00000430547 SMC3Q9UQE7 1217 aa19.55■□□□□ 0.72
NUP50-208ENST00000430547 H3BQ06 376 aaPredicted RBP19.54■□□□□ 0.72
NUP50-208ENST00000430547 INO80B-WBP1J3KQ70 363 aa19.54■□□□□ 0.72
NUP50-208ENST00000430547 RPA1P27694 616 aa19.54■□□□□ 0.72
NUP50-208ENST00000430547 HYAL1Q12794 435 aa19.54■□□□□ 0.72
NUP50-208ENST00000430547 LONRF3Q496Y0 759 aa19.54■□□□□ 0.72
NUP50-208ENST00000430547 PTCRAQ6ISU1 281 aaPredicted RBP19.54■□□□□ 0.72
NUP50-208ENST00000430547 POTEGQ6S5H5 508 aa19.54■□□□□ 0.72
NUP50-208ENST00000430547 KCNT2Q6UVM3 1135 aa19.54■□□□□ 0.72
NUP50-208ENST00000430547 LRRC55Q6ZSA7 311 aa19.54■□□□□ 0.72
NUP50-208ENST00000430547 MCPH1Q8NEM0 835 aa19.54■□□□□ 0.72
NUP50-208ENST00000430547 LPPQ93052 612 aa19.54■□□□□ 0.72
NUP50-208ENST00000430547 POLR3FQ9H1D9 316 aaPredicted RBP19.54■□□□□ 0.72
NUP50-208ENST00000430547 MINDY3Q9H8M7 445 aa19.54■□□□□ 0.72
NUP50-208ENST00000430547 LRWD1Q9UFC0 647 aa19.54■□□□□ 0.72
NUP50-208ENST00000430547 DBR1Q9UK59 544 aaKnown RBP19.54■□□□□ 0.72
NUP50-208ENST00000430547 FAM50BQ9Y247 325 aa19.54■□□□□ 0.72
NUP50-208ENST00000430547 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.54■□□□□ 0.72
NUP50-208ENST00000430547 A0A087WWV3 80 aa19.53■□□□□ 0.72
NUP50-208ENST00000430547 LAD1O00515 517 aa19.53■□□□□ 0.72
NUP50-208ENST00000430547 IRS1P35568 1242 aa19.53■□□□□ 0.72
NUP50-208ENST00000430547 CCT6AP40227 531 aaKnown RBP19.53■□□□□ 0.72
NUP50-208ENST00000430547 FXR2P51116 673 aaKnown RBP eCLIP19.53■□□□□ 0.72
NUP50-208ENST00000430547 PTENP60484 403 aa19.53■□□□□ 0.72
NUP50-208ENST00000430547 KRT17Q04695 432 aa19.53■□□□□ 0.72
NUP50-208ENST00000430547 POU5F1BQ06416 359 aa19.53■□□□□ 0.72
NUP50-208ENST00000430547 PTGDRQ13258 359 aa19.53■□□□□ 0.72
NUP50-208ENST00000430547 CAPSQ13938 189 aa19.53■□□□□ 0.72
NUP50-208ENST00000430547 MAEAQ7L5Y9 396 aa19.53■□□□□ 0.72
NUP50-208ENST00000430547 INPP5FQ9Y2H2 1132 aa19.53■□□□□ 0.72
NUP50-208ENST00000430547 PCDHB6Q9Y5E3 794 aa19.53■□□□□ 0.72
NUP50-208ENST00000430547 PCDHB2Q9Y5E7 798 aa19.53■□□□□ 0.72
NUP50-208ENST00000430547 STK24Q9Y6E0 443 aa19.53■□□□□ 0.72
NUP50-208ENST00000430547 ARHGEF35A5YM69 484 aa19.52■□□□□ 0.72
NUP50-208ENST00000430547 ZNF623O75123 536 aa19.52■□□□□ 0.72
NUP50-208ENST00000430547 MUTP22033 750 aa19.52■□□□□ 0.72
NUP50-208ENST00000430547 AXLP30530 894 aa19.52■□□□□ 0.72
NUP50-208ENST00000430547 ARL2P36404 184 aa19.52■□□□□ 0.72
NUP50-208ENST00000430547 PBX3P40426 434 aa19.52■□□□□ 0.72
NUP50-208ENST00000430547 NRIP1P48552 1158 aa19.52■□□□□ 0.72
NUP50-208ENST00000430547 ALDH7A1P49419 539 aaKnown RBP19.52■□□□□ 0.72
NUP50-208ENST00000430547 PLCB3Q01970 1234 aa19.52■□□□□ 0.72
NUP50-208ENST00000430547 RNASELQ05823 741 aaKnown RBP19.52■□□□□ 0.72
NUP50-208ENST00000430547 COL19A1Q14993 1142 aa19.52■□□□□ 0.72
NUP50-208ENST00000430547 RILPL1Q5EBL4 403 aa19.52■□□□□ 0.72
NUP50-208ENST00000430547 PDE12Q6L8Q7 609 aaKnown RBP19.52■□□□□ 0.72
NUP50-208ENST00000430547 NOTUMQ6P988 496 aa19.52■□□□□ 0.72
NUP50-208ENST00000430547 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.52■□□□□ 0.72
NUP50-208ENST00000430547 URGCPQ8TCY9 931 aa19.52■□□□□ 0.72
NUP50-208ENST00000430547 ASAP3Q8TDY4 903 aa19.52■□□□□ 0.72
NUP50-208ENST00000430547 MRPS27Q92552 414 aaKnown RBP19.52■□□□□ 0.72
NUP50-208ENST00000430547 ENTPD7Q9NQZ7 604 aa19.52■□□□□ 0.72
NUP50-208ENST00000430547 SPG21Q9NZD8 308 aa19.52■□□□□ 0.72
NUP50-208ENST00000430547 LZTS1Q9Y250 596 aa19.52■□□□□ 0.72
NUP50-208ENST00000430547 TDRD15B5MCY1 1934 aaKnown RBP19.51■□□□□ 0.71
NUP50-208ENST00000430547 CARNS1A5YM72 827 aa19.51■□□□□ 0.71
NUP50-208ENST00000430547 LRRIQ4A6NIV6 560 aa19.51■□□□□ 0.71
NUP50-208ENST00000430547 ZC3H11AO75152 810 aaKnown RBP eCLIP19.51■□□□□ 0.71
NUP50-208ENST00000430547 GLRA2P23416 452 aa19.51■□□□□ 0.71
NUP50-208ENST00000430547 GTF2F1P35269 517 aaKnown RBP eCLIP19.51■□□□□ 0.714e-6■■■■□ 25.2
NUP50-208ENST00000430547 NDUFV1P49821 464 aa19.51■□□□□ 0.71
NUP50-208ENST00000430547 TOB1P50616 345 aaPredicted RBP19.51■□□□□ 0.71
NUP50-208ENST00000430547 NOMO2Q5JPE7 1267 aa19.51■□□□□ 0.71
NUP50-208ENST00000430547 ADGRD2Q7Z7M1 963 aa19.51■□□□□ 0.71
NUP50-208ENST00000430547 RBM23Q86U06 439 aaKnown RBP19.51■□□□□ 0.71
NUP50-208ENST00000430547 IFNLR1Q8IU57 520 aaPredicted RBP19.51■□□□□ 0.71
NUP50-208ENST00000430547 C4orf32Q8N8J7 132 aa19.51■□□□□ 0.71
NUP50-208ENST00000430547 CNNM3Q8NE01 707 aa19.51■□□□□ 0.71
NUP50-208ENST00000430547 TLE6Q9H808 572 aa19.51■□□□□ 0.71
NUP50-208ENST00000430547 BDP1A6H8Y1 2624 aa19.51■□□□□ 0.71
NUP50-208ENST00000430547 CNTNAP2Q9UHC6 1331 aa19.51■□□□□ 0.71
NUP50-208ENST00000430547 FSD2A1L4K1 749 aa19.5■□□□□ 0.71
NUP50-208ENST00000430547 TSPAN1O60635 241 aa19.5■□□□□ 0.71
NUP50-208ENST00000430547 HOXA11P31270 313 aaPredicted RBP19.5■□□□□ 0.71
NUP50-208ENST00000430547 PDIA5Q14554 519 aa19.5■□□□□ 0.71
NUP50-208ENST00000430547 CTC1Q2NKJ3 1217 aa19.5■□□□□ 0.71
NUP50-208ENST00000430547 PADI6Q6TGC4 694 aa19.5■□□□□ 0.71
NUP50-208ENST00000430547 DTHD1Q6ZMT9 781 aa19.5■□□□□ 0.71
NUP50-208ENST00000430547 ZBTB8OSQ8IWT0 167 aa19.5■□□□□ 0.71
NUP50-208ENST00000430547 SNX29Q8TEQ0 813 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms