RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 PER2O15055 1255 aa20.59■□□□□ 0.89
NUP50-207ENST00000424634 ASAP2O43150 1006 aa20.59■□□□□ 0.89
NUP50-207ENST00000424634 GAS2O43903 313 aaKnown RBP20.59■□□□□ 0.89
NUP50-207ENST00000424634 ZNF623O75123 536 aa20.59■□□□□ 0.89
NUP50-207ENST00000424634 GLP2RO95838 553 aa20.59■□□□□ 0.89
NUP50-207ENST00000424634 SPATA31C1P0DKV0 1188 aa20.59■□□□□ 0.89
NUP50-207ENST00000424634 ZNF174Q15697 407 aa20.59■□□□□ 0.89
NUP50-207ENST00000424634 SRGAP1Q7Z6B7 1085 aa20.59■□□□□ 0.89
NUP50-207ENST00000424634 GJD3Q8N144 294 aa20.59■□□□□ 0.89
NUP50-207ENST00000424634 RNF149Q8NC42 400 aa20.59■□□□□ 0.89
NUP50-207ENST00000424634 PIGOQ8TEQ8 1089 aa20.59■□□□□ 0.89
NUP50-207ENST00000424634 TCP11Q8WWU5 503 aa20.59■□□□□ 0.89
NUP50-207ENST00000424634 MRPS27Q92552 414 aaKnown RBP20.59■□□□□ 0.89
NUP50-207ENST00000424634 PPP2R3CQ969Q6 453 aa20.59■□□□□ 0.89
NUP50-207ENST00000424634 ZNF558Q96NG5 402 aa20.59■□□□□ 0.89
NUP50-207ENST00000424634 MTRQ99707 1265 aa20.59■□□□□ 0.89
NUP50-207ENST00000424634 FOXP1Q9H334 677 aaPredicted RBP20.59■□□□□ 0.89
NUP50-207ENST00000424634 TLE6Q9H808 572 aa20.59■□□□□ 0.89
NUP50-207ENST00000424634 SH2B1Q9NRF2 756 aaPredicted RBP20.59■□□□□ 0.89
NUP50-207ENST00000424634 LZTS1Q9Y250 596 aa20.59■□□□□ 0.89
NUP50-207ENST00000424634 MBTPS2O43462 519 aa20.58■□□□□ 0.89
NUP50-207ENST00000424634 HMGN5P82970 282 aaKnown RBP20.58■□□□□ 0.89
NUP50-207ENST00000424634 RBM10P98175 930 aaKnown RBP20.58■□□□□ 0.89
NUP50-207ENST00000424634 UBXN11Q5T124 520 aa20.58■□□□□ 0.89
NUP50-207ENST00000424634 NT5C1B-RDH14C9J2C7 533 aa20.57■□□□□ 0.88
NUP50-207ENST00000424634 OFD1O75665 1012 aa20.57■□□□□ 0.88
NUP50-207ENST00000424634 SKIP12755 728 aa20.57■□□□□ 0.88
NUP50-207ENST00000424634 ARL2P36404 184 aa20.57■□□□□ 0.88
NUP50-207ENST00000424634 RARRES1P49788 294 aa20.57■□□□□ 0.88
NUP50-207ENST00000424634 NDUFV1P49821 464 aa20.57■□□□□ 0.88
NUP50-207ENST00000424634 SMAD2Q15796 467 aaKnown RBP20.57■□□□□ 0.88
NUP50-207ENST00000424634 CATSPER3Q86XQ3 398 aa20.57■□□□□ 0.88
NUP50-207ENST00000424634 SLC39A11Q8N1S5 342 aa20.57■□□□□ 0.88
NUP50-207ENST00000424634 VN1R2Q8NFZ6 395 aa20.57■□□□□ 0.88
NUP50-207ENST00000424634 ASAP3Q8TDY4 903 aa20.57■□□□□ 0.88
NUP50-207ENST00000424634 SPG21Q9NZD8 308 aa20.57■□□□□ 0.88
NUP50-207ENST00000424634 CD207Q9UJ71 328 aa20.57■□□□□ 0.88
NUP50-207ENST00000424634 PCDHB2Q9Y5E7 798 aa20.57■□□□□ 0.88
NUP50-207ENST00000424634 HIDE1A8MVS5 230 aa20.56■□□□□ 0.88
NUP50-207ENST00000424634 MED24O75448 989 aa20.56■□□□□ 0.88
NUP50-207ENST00000424634 XRCC6P12956 609 aaKnown RBP eCLIP20.56■□□□□ 0.88
NUP50-207ENST00000424634 TECP42680 631 aa20.56■□□□□ 0.88
NUP50-207ENST00000424634 BCAR1P56945 870 aa20.56■□□□□ 0.88
NUP50-207ENST00000424634 PTENP60484 403 aa20.56■□□□□ 0.88
NUP50-207ENST00000424634 ZP2Q05996 745 aa20.56■□□□□ 0.88
NUP50-207ENST00000424634 DUSP6Q16828 381 aa20.56■□□□□ 0.88
NUP50-207ENST00000424634 PLPP4Q5VZY2 271 aa20.56■□□□□ 0.88
NUP50-207ENST00000424634 PDE12Q6L8Q7 609 aaKnown RBP20.56■□□□□ 0.88
NUP50-207ENST00000424634 AGMOQ6ZNB7 445 aa20.56■□□□□ 0.88
NUP50-207ENST00000424634 MRPL10Q7Z7H8 261 aaKnown RBP20.56■□□□□ 0.88
NUP50-207ENST00000424634 C4orf32Q8N8J7 132 aa20.56■□□□□ 0.88
NUP50-207ENST00000424634 FAM184AQ8NB25 1140 aa20.56■□□□□ 0.88
NUP50-207ENST00000424634 PUF60Q9UHX1 559 aaKnown RBP20.56■□□□□ 0.88
NUP50-207ENST00000424634 BARX2Q9UMQ3 279 aaPredicted RBP20.56■□□□□ 0.88
NUP50-207ENST00000424634 FAM50BQ9Y247 325 aa20.56■□□□□ 0.88
NUP50-207ENST00000424634 C19orf67A6NJJ6 358 aa20.55■□□□□ 0.88
NUP50-207ENST00000424634 PI4K2BG5E9Z4 385 aa20.55■□□□□ 0.88
NUP50-207ENST00000424634 DGAT1O75907 488 aa20.55■□□□□ 0.88
NUP50-207ENST00000424634 EYA4O95677 639 aa20.55■□□□□ 0.88
NUP50-207ENST00000424634 SSTR3P32745 418 aaPredicted RBP20.55■□□□□ 0.88
NUP50-207ENST00000424634 PPM1AP35813 382 aa20.55■□□□□ 0.88
NUP50-207ENST00000424634 RAB27AP51159 221 aa20.55■□□□□ 0.88
NUP50-207ENST00000424634 AFF1P51825 1210 aaKnown RBP20.55■□□□□ 0.88
NUP50-207ENST00000424634 KRT17Q04695 432 aa20.55■□□□□ 0.88
NUP50-207ENST00000424634 SMAD4Q13485 552 aaKnown RBP20.55■□□□□ 0.88
NUP50-207ENST00000424634 MXD4Q14582 209 aaPredicted RBP20.55■□□□□ 0.88
NUP50-207ENST00000424634 NBR1Q14596 966 aa20.55■□□□□ 0.88
NUP50-207ENST00000424634 NOMO2Q5JPE7 1267 aa20.55■□□□□ 0.88
NUP50-207ENST00000424634 NOSTRINQ8IVI9 506 aa20.55■□□□□ 0.88
NUP50-207ENST00000424634 TCF25Q9BQ70 676 aa20.55■□□□□ 0.88
NUP50-207ENST00000424634 MRPL9Q9BYD2 267 aaKnown RBP20.55■□□□□ 0.88
NUP50-207ENST00000424634 NRDE2Q9H7Z3 1164 aa20.55■□□□□ 0.88
NUP50-207ENST00000424634 TUFT1Q9NNX1 390 aa20.55■□□□□ 0.88
NUP50-207ENST00000424634 TBC1D13Q9NVG8 400 aa20.55■□□□□ 0.88
NUP50-207ENST00000424634 PRKAG3Q9UGI9 489 aa20.55■□□□□ 0.88
NUP50-207ENST00000424634 B4GALT3O60512 393 aa20.54■□□□□ 0.88
NUP50-207ENST00000424634 OR52Z1P0C646 297 aa20.54■□□□□ 0.88
NUP50-207ENST00000424634 GLRA2P23416 452 aa20.54■□□□□ 0.88
NUP50-207ENST00000424634 TOB1P50616 345 aaPredicted RBP20.54■□□□□ 0.88
NUP50-207ENST00000424634 POU5F1BQ06416 359 aa20.54■□□□□ 0.88
NUP50-207ENST00000424634 COASYQ13057 564 aa20.54■□□□□ 0.88
NUP50-207ENST00000424634 CAPSQ13938 189 aa20.54■□□□□ 0.88
NUP50-207ENST00000424634 KCNC3Q14003 757 aa20.54■□□□□ 0.88
NUP50-207ENST00000424634 RABEP1Q15276 862 aa20.54■□□□□ 0.88
NUP50-207ENST00000424634 TTC38Q5R3I4 469 aa20.54■□□□□ 0.88
NUP50-207ENST00000424634 GLB1LQ6UWU2 654 aa20.54■□□□□ 0.88
NUP50-207ENST00000424634 TMEM173Q86WV6 379 aaPredicted RBP20.54■□□□□ 0.88
NUP50-207ENST00000424634 IFNLR1Q8IU57 520 aaPredicted RBP20.54■□□□□ 0.88
NUP50-207ENST00000424634 ADHFE1Q8IWW8 467 aa20.54■□□□□ 0.88
NUP50-207ENST00000424634 POLR3CQ9BUI4 534 aaPredicted RBP20.54■□□□□ 0.88
NUP50-207ENST00000424634 C1QTNF1Q9BXJ1 281 aa20.54■□□□□ 0.88
NUP50-207ENST00000424634 RAPGEFL1Q9UHV5 662 aa20.54■□□□□ 0.88
NUP50-207ENST00000424634 INPP5FQ9Y2H2 1132 aa20.54■□□□□ 0.88
NUP50-207ENST00000424634 TRIOO75962 3097 aa20.54■□□□□ 0.88
NUP50-207ENST00000424634 TSPAN1O60635 241 aa20.53■□□□□ 0.88
NUP50-207ENST00000424634 COL9A1P20849 921 aa20.53■□□□□ 0.88
NUP50-207ENST00000424634 U2AF2P26368 475 aaKnown RBP eCLIP20.53■□□□□ 0.88
NUP50-207ENST00000424634 ALDH7A1P49419 539 aaKnown RBP20.53■□□□□ 0.88
NUP50-207ENST00000424634 MBTD1Q05BQ5 628 aa20.53■□□□□ 0.88
NUP50-207ENST00000424634 ORC2Q13416 577 aaPredicted RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms