RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 HMGN5P82970 282 aaKnown RBP10.35□□□□□ -0.75
NUP50-206ENST00000422489 PLCB3Q01970 1234 aa10.35□□□□□ -0.75
NUP50-206ENST00000422489 COL19A1Q14993 1142 aa10.35□□□□□ -0.75
NUP50-206ENST00000422489 C8orf34Q49A92 452 aa10.35□□□□□ -0.75
NUP50-206ENST00000422489 PDE12Q6L8Q7 609 aaKnown RBP10.35□□□□□ -0.75
NUP50-206ENST00000422489 LLGL2Q6P1M3 1020 aa10.35□□□□□ -0.75
NUP50-206ENST00000422489 GLB1LQ6UWU2 654 aa10.35□□□□□ -0.75
NUP50-206ENST00000422489 ZNF598Q86UK7 904 aaKnown RBP10.35□□□□□ -0.75
NUP50-206ENST00000422489 FERMT3Q86UX7 667 aa10.35□□□□□ -0.75
NUP50-206ENST00000422489 TMEM87AQ8NBN3 555 aa10.35□□□□□ -0.75
NUP50-206ENST00000422489 MTMR9Q96QG7 549 aa10.35□□□□□ -0.75
NUP50-206ENST00000422489 TCF25Q9BQ70 676 aa10.35□□□□□ -0.75
NUP50-206ENST00000422489 C1QTNF1Q9BXJ1 281 aa10.35□□□□□ -0.75
NUP50-206ENST00000422489 MRPL9Q9BYD2 267 aaKnown RBP10.35□□□□□ -0.75
NUP50-206ENST00000422489 GBP3Q9H0R5 595 aa10.35□□□□□ -0.75
NUP50-206ENST00000422489 MINDY3Q9H8M7 445 aa10.35□□□□□ -0.75
NUP50-206ENST00000422489 IFT122Q9HBG6 1241 aa10.35□□□□□ -0.75
NUP50-206ENST00000422489 FAM105AQ9NUU6 356 aa10.35□□□□□ -0.75
NUP50-206ENST00000422489 PCDHB2Q9Y5E7 798 aa10.35□□□□□ -0.75
NUP50-206ENST00000422489 EYSQ5T1H1 3165 aa10.35□□□□□ -0.75
NUP50-206ENST00000422489 CUL9Q8IWT3 2517 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 MYO9BQ13459 2157 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 POTEMA6NI47 508 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 MEIS3P2A8K0S8 358 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 INO80B-WBP1J3KQ70 363 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 ZC3H11AO75152 810 aaKnown RBP eCLIP10.34□□□□□ -0.75
NUP50-206ENST00000422489 TBX10O75333 385 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 OFD1O75665 1012 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 ERLIN2O94905 339 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 CXCL14O95715 111 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 ATF7P17544 494 aaPredicted RBP10.34□□□□□ -0.75
NUP50-206ENST00000422489 PPM1AP35813 382 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 RAB27AP51159 221 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 RBM10P98175 930 aaKnown RBP10.34□□□□□ -0.75
NUP50-206ENST00000422489 TFDP1Q14186 410 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 MXD4Q14582 209 aaPredicted RBP10.34□□□□□ -0.75
NUP50-206ENST00000422489 NOMO2Q5JPE7 1267 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 SPDYE1Q8NFV5 336 aaPredicted RBP10.34□□□□□ -0.75
NUP50-206ENST00000422489 FBXO18Q8NFZ0 1043 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 KIF2CQ99661 725 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 APOL5Q9BWW9 433 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 FOXP1Q9H334 677 aaPredicted RBP10.34□□□□□ -0.75
NUP50-206ENST00000422489 SH2B1Q9NRF2 756 aaPredicted RBP10.34□□□□□ -0.75
NUP50-206ENST00000422489 AGPAT5Q9NUQ2 364 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 CLEC1BQ9P126 229 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 RAPGEFL1Q9UHV5 662 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 BARX2Q9UMQ3 279 aaPredicted RBP10.34□□□□□ -0.75
NUP50-206ENST00000422489 NOL7Q9UMY1 257 aaKnown RBP10.34□□□□□ -0.75
NUP50-206ENST00000422489 LZTS1Q9Y250 596 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 TRANK1O15050 2925 aa10.34□□□□□ -0.75
NUP50-206ENST00000422489 SIP14410 1827 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 FAM86C2PA6NEL3 165 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 HIDE1A8MVS5 230 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 PI4K2BG5E9Z4 385 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 FSCN2O14926 492 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 USO1O60763 962 aaKnown RBP10.33□□□□□ -0.76
NUP50-206ENST00000422489 ZNF623O75123 536 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 MED24O75448 989 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 DGAT1O75907 488 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 LYPLA2O95372 231 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 OR52Z1P0C646 297 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 XRCC6P12956 609 aaKnown RBP eCLIP10.33□□□□□ -0.76
NUP50-206ENST00000422489 ITGA4P13612 1032 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 HOXA11P31270 313 aaPredicted RBP10.33□□□□□ -0.76
NUP50-206ENST00000422489 FXR2P51116 673 aaKnown RBP eCLIP10.33□□□□□ -0.76
NUP50-206ENST00000422489 SMAD4Q13485 552 aaKnown RBP10.33□□□□□ -0.76
NUP50-206ENST00000422489 BMS1Q14692 1282 aaKnown RBP10.33□□□□□ -0.76
NUP50-206ENST00000422489 DUSP6Q16828 381 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 TMEM31Q5JXX7 168 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 TTC38Q5R3I4 469 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 CATSPER3Q86XQ3 398 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 ADHFE1Q8IWW8 467 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 SLC39A11Q8N1S5 342 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 ERMNQ8TAM6 284 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 URGCPQ8TCY9 931 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 ASAP3Q8TDY4 903 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 TMEM169Q96HH4 297 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 CPB2Q96IY4 423 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 MSLNLQ96KJ4 702 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 FAM193BQ96PV7 902 aaPredicted RBP10.33□□□□□ -0.76
NUP50-206ENST00000422489 NACC1Q96RE7 527 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 TRAIPQ9BWF2 469 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 APOL6Q9BWW8 343 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 POLR3FQ9H1D9 316 aaPredicted RBP10.33□□□□□ -0.76
NUP50-206ENST00000422489 NRDE2Q9H7Z3 1164 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 UPF2Q9HAU5 1272 aaKnown RBP10.33□□□□□ -0.76
NUP50-206ENST00000422489 NGRNQ9NPE2 291 aaKnown RBP10.33□□□□□ -0.76
NUP50-206ENST00000422489 XPNPEP1Q9NQW7 623 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 PRKAG3Q9UGI9 489 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 PRUNE2Q8WUY3 3088 aa10.33□□□□□ -0.76
NUP50-206ENST00000422489 ARHGEF35A5YM69 484 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 ST18O60284 1047 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 POMCP01189 267 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 ALDH2P05091 517 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 GALTP07902 379 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 SPATA31C1P0DKV0 1188 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 SRGAP2BP0DMP2 458 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 ALADP13716 330 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 LIG1P18858 919 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 GLRA2P23416 452 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms