RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 TNFRSF25Q93038 417 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 DYDC2Q96IM9 177 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 MSLNLQ96KJ4 702 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 ZNF558Q96NG5 402 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 TRAIPQ9BWF2 469 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 DHX33Q9H6R0 707 aaKnown RBP10.56□□□□□ -0.72
NUP50-205ENST00000419387 RGL1Q9NZL6 768 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 CLEC1BQ9P126 229 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 WRAP73Q9P2S5 460 aaPredicted RBP10.56□□□□□ -0.72
NUP50-205ENST00000419387 RAPGEFL1Q9UHV5 662 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 PCDHGC5Q9Y5F6 944 aa10.56□□□□□ -0.72
NUP50-205ENST00000419387 FSD2A1L4K1 749 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 BTBD18B2RXH4 712 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 PER2O15055 1255 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 SLITRK3O94933 977 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 SKIP12755 728 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 ATF7P17544 494 aaPredicted RBP10.55□□□□□ -0.72
NUP50-205ENST00000419387 YWHABP31946 246 aaKnown RBP10.55□□□□□ -0.72
NUP50-205ENST00000419387 PPM1AP35813 382 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 RFC5P40937 340 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 PHKA2P46019 1235 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 POLGP54098 1239 aaPredicted RBP10.55□□□□□ -0.72
NUP50-205ENST00000419387 KRT17Q04695 432 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 SPIRE1Q08AE8 756 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 COASYQ13057 564 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 CTTNQ14247 550 aaKnown RBP10.55□□□□□ -0.72
NUP50-205ENST00000419387 TWF2Q6IBS0 349 aaKnown RBP10.55□□□□□ -0.72
NUP50-205ENST00000419387 CATSPER4Q7RTX7 472 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 HELQQ8TDG4 1101 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 PRPF31Q8WWY3 499 aaKnown RBP10.55□□□□□ -0.72
NUP50-205ENST00000419387 NLRP4Q96MN2 994 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 CDCA3Q99618 268 aaPredicted RBP10.55□□□□□ -0.72
NUP50-205ENST00000419387 LXNQ9BS40 222 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 ZSWIM4Q9H7M6 989 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 IFT122Q9HBG6 1241 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 NGRNQ9NPE2 291 aaKnown RBP10.55□□□□□ -0.72
NUP50-205ENST00000419387 C11orf16Q9NQ32 467 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 SPG21Q9NZD8 308 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 PCDHA12Q9UN75 941 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 COL4A3BPQ9Y5P4 624 aa10.55□□□□□ -0.72
NUP50-205ENST00000419387 ZBTB39O15060 712 aa10.54□□□□□ -0.72
NUP50-205ENST00000419387 ASAP2O43150 1006 aa10.54□□□□□ -0.72
NUP50-205ENST00000419387 GAS2O43903 313 aaKnown RBP10.54□□□□□ -0.72
NUP50-205ENST00000419387 JAK2O60674 1132 aa10.54□□□□□ -0.72
NUP50-205ENST00000419387 ZNF623O75123 536 aa10.54□□□□□ -0.72
NUP50-205ENST00000419387 GLP2RO95838 553 aa10.54□□□□□ -0.72
NUP50-205ENST00000419387 SRGAP2CP0DJJ0 459 aa10.54□□□□□ -0.72
NUP50-205ENST00000419387 PBX3P40426 434 aa10.54□□□□□ -0.72
NUP50-205ENST00000419387 TRIM29Q14134 588 aa10.54□□□□□ -0.72
NUP50-205ENST00000419387 DUSP6Q16828 381 aa10.54□□□□□ -0.72
NUP50-205ENST00000419387 XKR9Q5GH70 373 aa10.54□□□□□ -0.72
NUP50-205ENST00000419387 SRGAP1Q7Z6B7 1085 aa10.54□□□□□ -0.72
NUP50-205ENST00000419387 TPH2Q8IWU9 490 aa10.54□□□□□ -0.72
NUP50-205ENST00000419387 DIS3L2Q8IYB7 885 aaKnown RBP10.54□□□□□ -0.72
NUP50-205ENST00000419387 SMRP1Q8NCR6 262 aa10.54□□□□□ -0.72
NUP50-205ENST00000419387 TCP11Q8WWU5 503 aa10.54□□□□□ -0.72
NUP50-205ENST00000419387 PSPC1Q8WXF1 523 aaKnown RBP10.54□□□□□ -0.72
NUP50-205ENST00000419387 RSPH1Q8WYR4 309 aa10.54□□□□□ -0.72
NUP50-205ENST00000419387 TMEM143Q96AN5 459 aa10.54□□□□□ -0.72
NUP50-205ENST00000419387 POP1Q99575 1024 aaKnown RBP10.54□□□□□ -0.72
NUP50-205ENST00000419387 TCF25Q9BQ70 676 aa10.54□□□□□ -0.72
NUP50-205ENST00000419387 EIF2AK1Q9BQI3 630 aaKnown RBP10.54□□□□□ -0.72
NUP50-205ENST00000419387 MRPL9Q9BYD2 267 aaKnown RBP10.54□□□□□ -0.72
NUP50-205ENST00000419387 PLXNA4Q9HCM2 1894 aa10.54□□□□□ -0.72
NUP50-205ENST00000419387 BARX2Q9UMQ3 279 aaPredicted RBP10.54□□□□□ -0.72
NUP50-205ENST00000419387 PIN4Q9Y237 131 aaKnown RBP10.54□□□□□ -0.72
NUP50-205ENST00000419387 FAM86C2PA6NEL3 165 aa10.53□□□□□ -0.72
NUP50-205ENST00000419387 DCXO43602 365 aa10.53□□□□□ -0.72
NUP50-205ENST00000419387 ALDH7A1P49419 539 aaKnown RBP10.53□□□□□ -0.72
NUP50-205ENST00000419387 RAB27AP51159 221 aa10.53□□□□□ -0.72
NUP50-205ENST00000419387 FOSBP53539 338 aa10.53□□□□□ -0.72
NUP50-205ENST00000419387 CYP4A11Q02928 519 aa10.53□□□□□ -0.72
NUP50-205ENST00000419387 LAMTOR4Q0VGL1 99 aa10.53□□□□□ -0.72
NUP50-205ENST00000419387 CALCRLQ16602 461 aa10.53□□□□□ -0.72
NUP50-205ENST00000419387 PLPP4Q5VZY2 271 aa10.53□□□□□ -0.72
NUP50-205ENST00000419387 TMC7Q7Z402 723 aa10.53□□□□□ -0.72
NUP50-205ENST00000419387 SLC39A11Q8N1S5 342 aa10.53□□□□□ -0.72
NUP50-205ENST00000419387 LPPQ93052 612 aa10.53□□□□□ -0.72
NUP50-205ENST00000419387 PGBD4Q96DM1 585 aa10.53□□□□□ -0.72
NUP50-205ENST00000419387 HSD17B14Q9BPX1 270 aa10.53□□□□□ -0.72
NUP50-205ENST00000419387 TTC12Q9H892 705 aaPredicted RBP10.53□□□□□ -0.72
NUP50-205ENST00000419387 MINDY3Q9H8M7 445 aa10.53□□□□□ -0.72
NUP50-205ENST00000419387 ENTPD7Q9NQZ7 604 aa10.53□□□□□ -0.72
NUP50-205ENST00000419387 FAM105AQ9NUU6 356 aa10.53□□□□□ -0.72
NUP50-205ENST00000419387 LIMCH1Q9UPQ0 1083 aa10.53□□□□□ -0.72
NUP50-205ENST00000419387 CARNS1A5YM72 827 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 HIDE1A8MVS5 230 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 PRR33A8MZF0 331 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 NT5C1B-RDH14C9J2C7 533 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 NEMFO60524 1076 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 OFD1O75665 1012 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 LYPLA2O95372 231 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 SRGAP2BP0DMP2 458 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 HOXA11P31270 313 aaPredicted RBP10.52□□□□□ -0.73
NUP50-205ENST00000419387 TXKP42681 527 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 BCAR1P56945 870 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 RBM10P98175 930 aaKnown RBP10.52□□□□□ -0.73
NUP50-205ENST00000419387 ST3GAL1Q11201 340 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 KCNC3Q14003 757 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 EMC2Q15006 297 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms