RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 GDF15Q99988 308 aa33.77■■■■□ 3
CSNK1E-206ENST00000413574 PANK4Q9NVE7 773 aa33.77■■■■□ 3
CSNK1E-206ENST00000413574 LARSQ9P2J5 1176 aaKnown RBP33.77■■■■□ 3
CSNK1E-206ENST00000413574 INO80B-WBP1J3KQ70 363 aa33.76■■■■□ 3
CSNK1E-206ENST00000413574 CNNM4Q6P4Q7 775 aa33.76■■■■□ 3
CSNK1E-206ENST00000413574 ZNF365Q70YC5 407 aa33.76■■■■□ 3
CSNK1E-206ENST00000413574 SRGAP1Q7Z6B7 1085 aa33.76■■■■□ 3
CSNK1E-206ENST00000413574 SFR1Q86XK3 245 aa33.76■■■■□ 3
CSNK1E-206ENST00000413574 IFNLR1Q8IU57 520 aaPredicted RBP33.76■■■■□ 3
CSNK1E-206ENST00000413574 NFKBIZQ9BYH8 718 aa33.76■■■■□ 3
CSNK1E-206ENST00000413574 INO80BQ9C086 356 aaPredicted RBP33.76■■■■□ 3
CSNK1E-206ENST00000413574 ERVK-5Q9HDB9 667 aa33.76■■■■□ 3
CSNK1E-206ENST00000413574 FRMD3A2A2Y4 597 aa33.75■■■□□ 2.99
CSNK1E-206ENST00000413574 BUD13Q9BRD0 619 aaKnown RBP eCLIP33.75■■■□□ 2.998e-7■■■■□ 21.8
CSNK1E-206ENST00000413574 TBC1D7Q9P0N9 293 aa33.75■■■□□ 2.99
CSNK1E-206ENST00000413574 KINO60870 393 aaKnown RBP33.75■■■□□ 2.99
CSNK1E-206ENST00000413574 TMEM240Q5SV17 173 aa33.75■■■□□ 2.99
CSNK1E-206ENST00000413574 ZBTB8OSQ8IWT0 167 aa33.75■■■□□ 2.99
CSNK1E-206ENST00000413574 SPIRE2Q8WWL2 714 aa33.75■■■□□ 2.99
CSNK1E-206ENST00000413574 SEPT8Q92599 483 aa33.75■■■□□ 2.99
CSNK1E-206ENST00000413574 TIGD1Q96MW7 591 aa33.75■■■□□ 2.99
CSNK1E-206ENST00000413574 NTPCRQ9BSD7 190 aaKnown RBP33.75■■■□□ 2.99
CSNK1E-206ENST00000413574 TMX1Q9H3N1 280 aa33.75■■■□□ 2.99
CSNK1E-206ENST00000413574 GTPBP6O43824 516 aaPredicted RBP33.74■■■□□ 2.99
CSNK1E-206ENST00000413574 TRAK2O60296 914 aa33.74■■■□□ 2.99
CSNK1E-206ENST00000413574 HERC4Q5GLZ8 1057 aaPredicted RBP33.74■■■□□ 2.99
CSNK1E-206ENST00000413574 OTOP2Q7RTS6 562 aa33.74■■■□□ 2.99
CSNK1E-206ENST00000413574 HPS3Q969F9 1004 aa33.74■■■□□ 2.99
CSNK1E-206ENST00000413574 FIZ1Q96SL8 496 aa33.74■■■□□ 2.99
CSNK1E-206ENST00000413574 GPR182O15218 404 aa33.73■■■□□ 2.99
CSNK1E-206ENST00000413574 PFKMP08237 780 aa33.73■■■□□ 2.99
CSNK1E-206ENST00000413574 NMT1P30419 496 aaKnown RBP33.73■■■□□ 2.99
CSNK1E-206ENST00000413574 MCM4P33991 863 aa33.73■■■□□ 2.99
CSNK1E-206ENST00000413574 COASYQ13057 564 aa33.73■■■□□ 2.99
CSNK1E-206ENST00000413574 PNOCQ13519 176 aa33.73■■■□□ 2.99
CSNK1E-206ENST00000413574 CNKSR3Q6P9H4 555 aa33.73■■■□□ 2.99
CSNK1E-206ENST00000413574 CATSPER4Q7RTX7 472 aa33.73■■■□□ 2.99
CSNK1E-206ENST00000413574 CCDC65Q8IXS2 484 aa33.73■■■□□ 2.99
CSNK1E-206ENST00000413574 ARHGAP28Q9P2N2 729 aa33.73■■■□□ 2.99
CSNK1E-206ENST00000413574 USP20Q9Y2K6 914 aa33.73■■■□□ 2.99
CSNK1E-206ENST00000413574 MICAL3Q7RTP6 2002 aa33.73■■■□□ 2.99
CSNK1E-206ENST00000413574 SFPQP23246 707 aaKnown RBP eCLIP33.72■■■□□ 2.99
CSNK1E-206ENST00000413574 SMTNP53814 917 aa33.72■■■□□ 2.99
CSNK1E-206ENST00000413574 POSTNQ15063 836 aa33.72■■■□□ 2.99
CSNK1E-206ENST00000413574 KANK3Q6NY19 840 aa33.72■■■□□ 2.99
CSNK1E-206ENST00000413574 FAM178BQ8IXR5 827 aa33.72■■■□□ 2.99
CSNK1E-206ENST00000413574 TMEM161BQ8NDZ6 487 aa33.72■■■□□ 2.99
CSNK1E-206ENST00000413574 ERCC4Q92889 916 aaPredicted RBP33.72■■■□□ 2.99
CSNK1E-206ENST00000413574 CCDC113Q9H0I3 377 aa33.72■■■□□ 2.99
CSNK1E-206ENST00000413574 C2orf40Q9H1Z8 148 aa33.72■■■□□ 2.99
CSNK1E-206ENST00000413574 KLRC4O43908 158 aa33.71■■■□□ 2.99
CSNK1E-206ENST00000413574 FGBP02675 491 aa33.71■■■□□ 2.99
CSNK1E-206ENST00000413574 EDN1P05305 212 aa33.71■■■□□ 2.99
CSNK1E-206ENST00000413574 GAP43P17677 238 aa33.71■■■□□ 2.99
CSNK1E-206ENST00000413574 NCKAP1LP55160 1127 aa33.71■■■□□ 2.99
CSNK1E-206ENST00000413574 DPYDQ12882 1025 aa33.71■■■□□ 2.99
CSNK1E-206ENST00000413574 C9orf50Q5SZB4 431 aa33.71■■■□□ 2.99
CSNK1E-206ENST00000413574 UNC13DQ70J99 1090 aa33.71■■■□□ 2.99
CSNK1E-206ENST00000413574 TAS1R3Q7RTX0 852 aa33.71■■■□□ 2.99
CSNK1E-206ENST00000413574 GPT2Q8TD30 523 aa33.71■■■□□ 2.99
CSNK1E-206ENST00000413574 UBE2OQ9C0C9 1292 aaKnown RBP33.71■■■□□ 2.99
CSNK1E-206ENST00000413574 B4GALT5O43286 388 aa33.71■■■□□ 2.99
CSNK1E-206ENST00000413574 AMHR2Q16671 573 aa33.71■■■□□ 2.99
CSNK1E-206ENST00000413574 FGFBP2Q9BYJ0 223 aa33.71■■■□□ 2.99
CSNK1E-206ENST00000413574 DENND3A2RUS2 1198 aa33.7■■■□□ 2.99
CSNK1E-206ENST00000413574 TTLL13PA6NNM8 815 aa33.7■■■□□ 2.99
CSNK1E-206ENST00000413574 K7ENM7 598 aa33.7■■■□□ 2.99
CSNK1E-206ENST00000413574 MGEA5O60502 916 aa33.7■■■□□ 2.99
CSNK1E-206ENST00000413574 PSRC1Q6PGN9 363 aaPredicted RBP33.7■■■□□ 2.99
CSNK1E-206ENST00000413574 HAUS6Q7Z4H7 955 aa33.7■■■□□ 2.99
CSNK1E-206ENST00000413574 APBB2Q92870 758 aa33.7■■■□□ 2.99
CSNK1E-206ENST00000413574 FZD8Q9H461 694 aa33.7■■■□□ 2.99
CSNK1E-206ENST00000413574 K7ERI5 159 aa33.69■■■□□ 2.98
CSNK1E-206ENST00000413574 TSPAN1O60635 241 aa33.69■■■□□ 2.98
CSNK1E-206ENST00000413574 MAPTP10636 758 aaKnown RBP33.69■■■□□ 2.98
CSNK1E-206ENST00000413574 EFNA5P52803 228 aa33.69■■■□□ 2.98
CSNK1E-206ENST00000413574 ZC2HC1CQ53FD0 456 aaPredicted RBP33.69■■■□□ 2.98
CSNK1E-206ENST00000413574 RTN4RL1Q86UN2 441 aaPredicted RBP33.69■■■□□ 2.98
CSNK1E-206ENST00000413574 LINC01599Q8WXQ3 324 aa33.69■■■□□ 2.98
CSNK1E-206ENST00000413574 MRPL44Q9H9J2 332 aaKnown RBP33.69■■■□□ 2.98
CSNK1E-206ENST00000413574 ERLIN2O94905 339 aa33.68■■■□□ 2.98
CSNK1E-206ENST00000413574 PRKCBP05771 671 aa33.68■■■□□ 2.98
CSNK1E-206ENST00000413574 MYL1P05976 194 aa33.68■■■□□ 2.98
CSNK1E-206ENST00000413574 IKBKEQ14164 716 aa33.68■■■□□ 2.98
CSNK1E-206ENST00000413574 MAPK6Q16659 721 aa33.68■■■□□ 2.98
CSNK1E-206ENST00000413574 GLIS3Q8NEA6 775 aa33.68■■■□□ 2.98
CSNK1E-206ENST00000413574 CCDC34Q96HJ3 373 aa33.68■■■□□ 2.98
CSNK1E-206ENST00000413574 CPB2Q96IY4 423 aa33.68■■■□□ 2.98
CSNK1E-206ENST00000413574 SEL1LQ9UBV2 794 aa33.68■■■□□ 2.98
CSNK1E-206ENST00000413574 KCNG1Q9UIX4 513 aa33.68■■■□□ 2.98
CSNK1E-206ENST00000413574 PIN4Q9Y237 131 aaKnown RBP33.68■■■□□ 2.98
CSNK1E-206ENST00000413574 PVALEFA0A1B0GWK0 134 aa33.68■■■□□ 2.98
CSNK1E-206ENST00000413574 RPN1P04843 607 aaKnown RBP33.68■■■□□ 2.98
CSNK1E-206ENST00000413574 CASP5P51878 434 aa33.68■■■□□ 2.98
CSNK1E-206ENST00000413574 SHHQ15465 462 aa33.68■■■□□ 2.98
CSNK1E-206ENST00000413574 KMT5BQ4FZB7 885 aa33.68■■■□□ 2.98
CSNK1E-206ENST00000413574 CHRDL2Q6WN34 429 aa33.68■■■□□ 2.98
CSNK1E-206ENST00000413574 AGPAT5Q9NUQ2 364 aa33.68■■■□□ 2.98
CSNK1E-206ENST00000413574 PRMT7Q9NVM4 692 aaPredicted RBP33.68■■■□□ 2.98
CSNK1E-206ENST00000413574 CXXC1Q9P0U4 656 aaPredicted RBP33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms