RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 RNASELQ05823 741 aaKnown RBP6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 RCN1Q15293 331 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 Q4G0T1 1027 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 LIN52Q52LA3 116 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 ZNF571Q7Z3V5 609 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 SPATA5Q8NB90 893 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 STMN2Q93045 179 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 DDX27Q96GQ7 796 aaKnown RBP6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 NT5C3AQ9H0P0 336 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 GANQ9H2C0 597 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 TMEM60Q9H2L4 133 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 SYNCQ9H7C4 482 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 ABCF2Q9UG63 623 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 PCYOX1Q9UHG3 505 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 ADGRA3Q8IWK6 1321 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 SYNGAP1Q96PV0 1343 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 BCORQ6W2J9 1755 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 MAGEB2O15479 319 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 GGPS1O95749 300 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 OR52Z1P0C646 297 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 KRT13P13646 458 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 PHKG2P15735 406 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 PRKCIP41743 596 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 CDK7P50613 346 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 PRPF4BQ13523 1007 aaKnown RBP6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 GIT2Q14161 759 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 TXNRD1Q16881 649 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 PHLDB3Q6NSJ2 640 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 LDHAL6AQ6ZMR3 332 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 OTUD6AQ7L8S5 288 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 KIAA0825Q8IV33 1275 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 ST13P4Q8IZP2 240 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 LCORLQ8N3X6 602 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 DAGLBQ8NCG7 672 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 ART4Q93070 314 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 OCEL1Q9H607 264 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 STX18Q9P2W9 335 aaKnown RBP6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 CHKBQ9Y259 395 aa6.27□□□□□ -1.41
R3HDM1-202ENST00000409478 HGSO14964 777 aaPredicted RBP6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 PRKAB2O43741 272 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 GFPT2O94808 682 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 ECEL1O95672 775 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 LYNP07948 512 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 KHDC1Q4VXA5 237 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 HS2ST1Q7LGA3 356 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 IRF2BP2Q7Z5L9 587 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 MYOCDQ8IZQ8 938 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 RAPGEF4Q8WZA2 1011 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 LENG1Q96BZ8 264 aaPredicted RBP6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 CNNM1Q9NRU3 951 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 NDUFA13Q9P0J0 144 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 NENFQ9UMX5 172 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 TRAF5O00463 557 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 DDX3YO15523 660 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 CCDC22O60826 627 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 TCEA3O75764 348 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 ZWINTO95229 277 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 TAC1P20366 129 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 ALDH1B1P30837 517 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 RPL21P46778 160 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 TMED1Q13445 227 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 PTPROQ16827 1216 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 LONRF1Q17RB8 773 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 CCDC174Q6PII3 467 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 IFNL2Q8IZJ0 200 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 TTLL11Q8NHH1 800 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 UHMK1Q8TAS1 419 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 IRGQQ8WZA9 623 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 GLG1Q92896 1179 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 HPS3Q969F9 1004 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 MKL1Q969V6 931 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 DCAF5Q96JK2 942 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 ANGPTL2Q9UKU9 493 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 WDR37Q9Y2I8 494 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 PFASO15067 1338 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 FAM205AQ6ZU69 1335 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 MINDY4BA8MYZ0 360 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 CAPN9O14815 690 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 PDE8BO95263 885 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 PSMG1O95456 288 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 ASLP04424 464 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 PTGIRP43119 386 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 PHKA1P46020 1223 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 CALCOCO2Q13137 446 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 ORC2Q13416 577 aaPredicted RBP6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 RRP1BQ14684 758 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 ZNF449Q6P9G9 518 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 MARK2Q7KZI7 788 aaKnown RBP6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 TRIM59Q8IWR1 403 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 ANKRD35Q8N283 1001 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 ZNF653Q96CK0 615 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 MAML3Q96JK9 1138 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 ASCC2Q9H1I8 757 aaPredicted RBP6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.26□□□□□ -1.411e-6■■■■□ 26.2
R3HDM1-202ENST00000409478 NCANO14594 1321 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 UMODL1Q5DID0 1318 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 DUOX1Q9NRD9 1551 aa6.26□□□□□ -1.41
R3HDM1-202ENST00000409478 A8MXQ7 604 aa6.25□□□□□ -1.41
R3HDM1-202ENST00000409478 M0R2N6 131 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms