RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 NONOQ15233 471 aaKnown RBP eCLIP18.82■□□□□ 0.62e-8■□□□□ 11
CHMP3-203ENST00000409225 RTN1Q16799 776 aa18.82■□□□□ 0.6
CHMP3-203ENST00000409225 PRR16Q569H4 304 aa18.82■□□□□ 0.6
CHMP3-203ENST00000409225 APOA5Q6Q788 366 aa18.82■□□□□ 0.6
CHMP3-203ENST00000409225 ZNF280BQ86YH2 543 aa18.82■□□□□ 0.6
CHMP3-203ENST00000409225 RSPH1Q8WYR4 309 aa18.82■□□□□ 0.6
CHMP3-203ENST00000409225 MAN1C1Q9NR34 630 aa18.82■□□□□ 0.6
CHMP3-203ENST00000409225 PIN4Q9Y237 131 aaKnown RBP18.82■□□□□ 0.6
CHMP3-203ENST00000409225 NCOR2Q9Y618 2525 aa18.81■□□□□ 0.6
CHMP3-203ENST00000409225 WDR64B1ANS9 1081 aa18.81■□□□□ 0.6
CHMP3-203ENST00000409225 C2CD2LO14523 706 aa18.81■□□□□ 0.6
CHMP3-203ENST00000409225 ADAMTS3O15072 1205 aa18.81■□□□□ 0.6
CHMP3-203ENST00000409225 MYBP10242 640 aa18.81■□□□□ 0.6
CHMP3-203ENST00000409225 SKIP12755 728 aa18.81■□□□□ 0.6
CHMP3-203ENST00000409225 SFPQP23246 707 aaKnown RBP eCLIP18.81■□□□□ 0.6
CHMP3-203ENST00000409225 UGCGQ16739 394 aa18.81■□□□□ 0.6
CHMP3-203ENST00000409225 ZC3H14Q6PJT7 736 aaKnown RBP18.81■□□□□ 0.6
CHMP3-203ENST00000409225 DCLK2Q8N568 766 aa18.81■□□□□ 0.6
CHMP3-203ENST00000409225 DISC1Q9NRI5 854 aa18.81■□□□□ 0.6
CHMP3-203ENST00000409225 FAM105AQ9NUU6 356 aa18.81■□□□□ 0.6
CHMP3-203ENST00000409225 CLUHO75153 1309 aa18.8■□□□□ 0.6
CHMP3-203ENST00000409225 A0A087WZ62 844 aa18.8■□□□□ 0.6
CHMP3-203ENST00000409225 CCDC195A0A1B0GUA6 201 aa18.8■□□□□ 0.6
CHMP3-203ENST00000409225 CHMP2AO43633 222 aa18.8■□□□□ 0.6
CHMP3-203ENST00000409225 SP9P0CG40 484 aa18.8■□□□□ 0.6
CHMP3-203ENST00000409225 CREB3L3Q68CJ9 461 aa18.8■□□□□ 0.6
CHMP3-203ENST00000409225 SLC44A3Q8N4M1 653 aa18.8■□□□□ 0.6
CHMP3-203ENST00000409225 RUBCNQ92622 972 aa18.8■□□□□ 0.6
CHMP3-203ENST00000409225 MYADMQ96S97 322 aa18.8■□□□□ 0.6
CHMP3-203ENST00000409225 FDXACB1Q9BRP7 624 aaPredicted RBP18.8■□□□□ 0.6
CHMP3-203ENST00000409225 TRAIPQ9BWF2 469 aa18.8■□□□□ 0.6
CHMP3-203ENST00000409225 LSG1Q9H089 658 aaKnown RBP18.8■□□□□ 0.6
CHMP3-203ENST00000409225 WDR6Q9NNW5 1121 aaKnown RBP18.8■□□□□ 0.6
CHMP3-203ENST00000409225 MRPL17Q9NRX2 175 aaKnown RBP18.8■□□□□ 0.6
CHMP3-203ENST00000409225 CACNA1BQ00975 2339 aa18.8■□□□□ 0.6
CHMP3-203ENST00000409225 ZBTB43O43298 467 aa18.79■□□□□ 0.6
CHMP3-203ENST00000409225 LILRB3O75022 631 aa18.79■□□□□ 0.6
CHMP3-203ENST00000409225 KRT37O76014 449 aa18.79■□□□□ 0.6
CHMP3-203ENST00000409225 SRFP11831 508 aa18.79■□□□□ 0.6
CHMP3-203ENST00000409225 CMASQ8NFW8 434 aaPredicted RBP18.79■□□□□ 0.6
CHMP3-203ENST00000409225 URGCPQ8TCY9 931 aa18.79■□□□□ 0.6
CHMP3-203ENST00000409225 GPR152Q8TDT2 470 aa18.79■□□□□ 0.6
CHMP3-203ENST00000409225 STAMQ92783 540 aa18.79■□□□□ 0.6
CHMP3-203ENST00000409225 CNTNAP3BQ96NU0 1288 aa18.79■□□□□ 0.6
CHMP3-203ENST00000409225 CNTNAP3Q9BZ76 1288 aa18.79■□□□□ 0.6
CHMP3-203ENST00000409225 DLL3Q9NYJ7 618 aa18.79■□□□□ 0.6
CHMP3-203ENST00000409225 EPS15L1Q9UBC2 864 aa18.79■□□□□ 0.6
CHMP3-203ENST00000409225 STK39Q9UEW8 545 aa18.79■□□□□ 0.6
CHMP3-203ENST00000409225 BRPF3Q9ULD4 1205 aa18.79■□□□□ 0.6
CHMP3-203ENST00000409225 SIT1Q9Y3P8 196 aa18.79■□□□□ 0.6
CHMP3-203ENST00000409225 WDR81Q562E7 1941 aa18.78■□□□□ 0.6
CHMP3-203ENST00000409225 GOLGA8AA7E2F4 631 aa18.78■□□□□ 0.6
CHMP3-203ENST00000409225 GOLGA8BA8MQT2 603 aa18.78■□□□□ 0.6
CHMP3-203ENST00000409225 INPPL1O15357 1258 aa18.78■□□□□ 0.6
CHMP3-203ENST00000409225 DDHD2O94830 711 aa18.78■□□□□ 0.6
CHMP3-203ENST00000409225 RAB27AP51159 221 aa18.78■□□□□ 0.6
CHMP3-203ENST00000409225 AK2P54819 239 aa18.78■□□□□ 0.6
CHMP3-203ENST00000409225 MTERF2Q49AM1 385 aa18.78■□□□□ 0.6
CHMP3-203ENST00000409225 CATSPER4Q7RTX7 472 aa18.78■□□□□ 0.6
CHMP3-203ENST00000409225 C1orf210Q8IVY1 113 aa18.78■□□□□ 0.6
CHMP3-203ENST00000409225 TCEANC2Q96MN5 208 aa18.78■□□□□ 0.6
CHMP3-203ENST00000409225 ARHGEF3Q9NR81 526 aa18.78■□□□□ 0.6
CHMP3-203ENST00000409225 DLGAP2Q9P1A6 1054 aa18.78■□□□□ 0.6
CHMP3-203ENST00000409225 SEPT9Q9UHD8 586 aaPredicted RBP18.78■□□□□ 0.6
CHMP3-203ENST00000409225 FAN1Q9Y2M0 1017 aa18.78■□□□□ 0.6
CHMP3-203ENST00000409225 OTOGLQ3ZCN5 2332 aa18.78■□□□□ 0.6
CHMP3-203ENST00000409225 CEP250Q9BV73 2442 aa18.78■□□□□ 0.6
CHMP3-203ENST00000409225 TMEM150BA6NC51 233 aa18.77■□□□□ 0.6
CHMP3-203ENST00000409225 RFPL2O75678 378 aa18.77■□□□□ 0.6
CHMP3-203ENST00000409225 URODP06132 367 aa18.77■□□□□ 0.6
CHMP3-203ENST00000409225 CDC42EP1Q00587 391 aa18.77■□□□□ 0.6
CHMP3-203ENST00000409225 TARBP2Q15633 366 aaKnown RBP18.77■□□□□ 0.6
CHMP3-203ENST00000409225 RSPO4Q2I0M5 234 aaPredicted RBP18.77■□□□□ 0.6
CHMP3-203ENST00000409225 PHLDB3Q6NSJ2 640 aa18.77■□□□□ 0.6
CHMP3-203ENST00000409225 REXO1Q8N1G1 1221 aaKnown RBP18.77■□□□□ 0.6
CHMP3-203ENST00000409225 SMG7Q92540 1137 aaKnown RBP18.77■□□□□ 0.6
CHMP3-203ENST00000409225 LENG9Q96B70 501 aa18.77■□□□□ 0.6
CHMP3-203ENST00000409225 PGBD4Q96DM1 585 aa18.77■□□□□ 0.6
CHMP3-203ENST00000409225 FAM193BQ96PV7 902 aaPredicted RBP18.77■□□□□ 0.6
CHMP3-203ENST00000409225 SH2D3AQ9BRG2 576 aa18.77■□□□□ 0.6
CHMP3-203ENST00000409225 INO80BQ9C086 356 aaPredicted RBP18.77■□□□□ 0.6
CHMP3-203ENST00000409225 PCDHB2Q9Y5E7 798 aa18.77■□□□□ 0.6
CHMP3-203ENST00000409225 FRYLO94915 3013 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 POTEMA6NI47 508 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 NRP1O14786 923 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 TEX28O15482 410 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 ZNF623O75123 536 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 SOD2P04179 222 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 ALDH2P05091 517 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 ADH1AP07327 375 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 CDC27P30260 824 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 DNM2P50570 870 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 AFF1P51825 1210 aaKnown RBP18.76■□□□□ 0.59
CHMP3-203ENST00000409225 PFKFB3Q16875 520 aaPredicted RBP18.76■□□□□ 0.59
CHMP3-203ENST00000409225 ELMSAN1Q6PJG2 1045 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 POTEGQ6S5H5 508 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 AGMOQ6ZNB7 445 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 TAS1R1Q7RTX1 841 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 ZNF410Q86VK4 478 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 RHPN2Q8IUC4 686 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms