RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 RDM1Q8NG50 284 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 DNAJC7Q99615 494 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 AP1M1Q9BXS5 423 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 PLIN4Q96Q06 1357 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 ASTN2O75129 1339 aaPredicted RBP15.13■□□□□ 0.01
SCAF4-202ENST00000399804 GOLGA6CA6NDK9 693 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 EVI5O60447 810 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 FTLP02792 175 aaPredicted RBP15.13■□□□□ 0.01
SCAF4-202ENST00000399804 GOLGA6DP0CG33 693 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 ATF7P17544 494 aaPredicted RBP15.13■□□□□ 0.01
SCAF4-202ENST00000399804 RARRES1P49788 294 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 SLC12A3P55017 1021 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 PPP2R5CQ13362 524 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 ECM1Q16610 540 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 TMEM270Q6UE05 265 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 SAMD3Q8N6K7 520 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 DNAJC19Q96DA6 116 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 MRPL4Q9BYD3 311 aaKnown RBP15.13■□□□□ 0.01
SCAF4-202ENST00000399804 STK33Q9BYT3 514 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 GOLGA6AQ9NYA3 693 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 CCL15-CCL14A0A0B4J2E2 113 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 GOLGA8SH3BPF8 625 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 GAS8O95995 478 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 IFNB1P01574 187 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 PPP2R5EQ16537 467 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 CCL15Q16663 113 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 OSBPL9Q96SU4 736 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 CBWD1Q9BRT8 395 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 PDE11AQ9HCR9 933 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 CRYBG1Q9Y4K1 1723 aa15.13■□□□□ 0.01
SCAF4-202ENST00000399804 TADA3O75528 432 aa15.12■□□□□ 0.01
SCAF4-202ENST00000399804 PNMA6AP0CW24 399 aaPredicted RBP15.12■□□□□ 0.01
SCAF4-202ENST00000399804 SURF1Q15526 300 aa15.12■□□□□ 0.01
SCAF4-202ENST00000399804 CATSPER4Q7RTX7 472 aa15.12■□□□□ 0.01
SCAF4-202ENST00000399804 ETNPPLQ8TBG4 499 aa15.12■□□□□ 0.01
SCAF4-202ENST00000399804 PBKQ96KB5 322 aa15.12■□□□□ 0.01
SCAF4-202ENST00000399804 ABCB6Q9NP58 842 aa15.12■□□□□ 0.01
SCAF4-202ENST00000399804 OLFML3Q9NRN5 406 aa15.12■□□□□ 0.01
SCAF4-202ENST00000399804 HESX1Q9UBX0 185 aa15.12■□□□□ 0.01
SCAF4-202ENST00000399804 IKBKGQ9Y6K9 419 aa15.12■□□□□ 0.01
SCAF4-202ENST00000399804 BAZ2AQ9UIF9 1905 aaKnown RBP15.12■□□□□ 0.01
SCAF4-202ENST00000399804 CTIFO43310 598 aaKnown RBP15.12■□□□□ 0.01
SCAF4-202ENST00000399804 TRIM59Q8IWR1 403 aa15.12■□□□□ 0.01
SCAF4-202ENST00000399804 RHOT2Q8IXI1 618 aa15.12■□□□□ 0.01
SCAF4-202ENST00000399804 ARFGAP2Q8N6H7 521 aa15.12■□□□□ 0.01
SCAF4-202ENST00000399804 PARP2Q9UGN5 583 aa15.12■□□□□ 0.01
SCAF4-202ENST00000399804 FEZ2Q9UHY8 353 aaPredicted RBP15.12■□□□□ 0.01
SCAF4-202ENST00000399804 SNED1Q8TER0 1413 aa15.12■□□□□ 0.01
SCAF4-202ENST00000399804 CYP26A1O43174 497 aa15.12■□□□□ 0.01
SCAF4-202ENST00000399804 GRIN3BO60391 1043 aa15.12■□□□□ 0.01
SCAF4-202ENST00000399804 PSMD10O75832 226 aa15.12■□□□□ 0.01
SCAF4-202ENST00000399804 CNTN2Q02246 1040 aa15.12■□□□□ 0.01
SCAF4-202ENST00000399804 IL31RAQ8NI17 732 aa15.12■□□□□ 0.01
SCAF4-202ENST00000399804 P2RX7Q99572 595 aaKnown RBP15.12■□□□□ 0.01
SCAF4-202ENST00000399804 A1CFQ9NQ94 594 aaKnown RBP15.12■□□□□ 0.01
SCAF4-202ENST00000399804 KIF4AO95239 1232 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 ITGB5P18084 799 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 PHKA2P46019 1235 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 SNX16P57768 344 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 KCNA1Q09470 495 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 FIGNQ5HY92 759 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 PASD1Q8IV76 773 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 C4orf19Q8IY42 314 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 HACE1Q8IYU2 909 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 LRRC71Q8N4P6 559 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 AFAP1L1Q8TED9 768 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 SELENOSQ9BQE4 189 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 TARS2Q9BW92 718 aaKnown RBP15.11■□□□□ 0.01
SCAF4-202ENST00000399804 SPATC1LQ9H0A9 340 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 CYP26B1Q9NR63 512 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 DUSP10Q9Y6W6 482 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 VGLL3A8MV65 326 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 STAM2O75886 525 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 SOX10P56693 466 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 VGLL4Q14135 290 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 KAZNQ674X7 775 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 MAIP1Q8WWC4 291 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 SUCLA2Q9P2R7 463 aaPredicted RBP15.11■□□□□ 0.01
SCAF4-202ENST00000399804 CNOT8Q9UFF9 292 aaKnown RBP15.11■□□□□ 0.01
SCAF4-202ENST00000399804 TBX20Q9UMR3 447 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 ZNF185O15231 689 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 TLR3O15455 904 aaKnown RBP15.11■□□□□ 0.01
SCAF4-202ENST00000399804 GUCY2CP25092 1073 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 NPTX2P47972 431 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 CASP5P51878 434 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 GPC5P78333 572 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 SCYL2Q6P3W7 929 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 PNMA8AQ86V59 439 aaPredicted RBP15.11■□□□□ 0.01
SCAF4-202ENST00000399804 GPRC5AQ8NFJ5 357 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 NLGN2Q8NFZ4 835 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 TRIM11Q96F44 468 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 LACRTQ9GZZ8 138 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 C2orf40Q9H1Z8 148 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 RAB20Q9NX57 234 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 EFNA5P52803 228 aa15.11■□□□□ 0.01
SCAF4-202ENST00000399804 UBE4BO95155 1302 aa15.1■□□□□ 0.01
SCAF4-202ENST00000399804 OATP04181 439 aa15.1■□□□□ 0.01
SCAF4-202ENST00000399804 PON1P27169 355 aa15.1■□□□□ 0.01
SCAF4-202ENST00000399804 TCF7P36402 384 aaPredicted RBP15.1■□□□□ 0.01
SCAF4-202ENST00000399804 HERVK_113P62684 666 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms