RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 DMPKQ09013 629 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 GRSF1Q12849 480 aaKnown RBP eCLIP3.9□□□□□ -1.78
XRCC4-203ENST00000396027 TAF11Q15544 211 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 AOC3Q16853 763 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 PLEKHO1Q53GL0 409 aaPredicted RBP3.9□□□□□ -1.78
XRCC4-203ENST00000396027 GLE1Q53GS7 698 aaKnown RBP3.9□□□□□ -1.78
XRCC4-203ENST00000396027 DEPDC1Q5TB30 811 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 GKAP1Q5VSY0 366 aaPredicted RBP3.9□□□□□ -1.78
XRCC4-203ENST00000396027 AGAP9Q5VTM2 703 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 DAB2IPQ5VWQ8 1189 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 SPECC1LQ69YQ0 1117 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 TWF2Q6IBS0 349 aaKnown RBP3.9□□□□□ -1.78
XRCC4-203ENST00000396027 PHLDB3Q6NSJ2 640 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 PPP1R21Q6ZMI0 780 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 TOGARAM2Q6ZUX3 1019 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 NEK10Q6ZWH5 1172 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 FRA10AC1Q70Z53 315 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 CDC37L1Q7L3B6 337 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 UBE3BQ7Z3V4 1068 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 ERICH1Q86X53 443 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 RHOT2Q8IXI1 618 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 ETFBKMTQ8IXQ9 262 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 RGL4Q8IZJ4 473 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 PLD6Q8N2A8 252 aaKnown RBP3.9□□□□□ -1.78
XRCC4-203ENST00000396027 TTC30BQ8N4P2 665 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 CCDC82Q8N4S0 544 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 PAF1Q8N7H5 531 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 SLC43A3Q8NBI5 491 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.9□□□□□ -1.78
XRCC4-203ENST00000396027 DEPTORQ8TB45 409 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 FBF1Q8TES7 1133 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 ATP8B4Q8TF62 1192 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 RASSF5Q8WWW0 418 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 RPGRQ92834 1020 aaKnown RBP3.9□□□□□ -1.78
XRCC4-203ENST00000396027 PTPRN2Q92932 1015 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 KCNN1Q92952 543 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 PBXIP1Q96AQ6 731 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 SDCCAG3Q96C92 435 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 NRBF2Q96F24 287 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 ANKRD36BP1Q96IX9 119 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 COG3Q96JB2 828 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 CLMNQ96JQ2 1002 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 TCF12Q99081 682 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 PRPF18Q99633 342 aaKnown RBP3.9□□□□□ -1.78
XRCC4-203ENST00000396027 AIFM2Q9BRQ8 373 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 HERC2P3Q9BVR0 1158 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 PUS3Q9BZE2 481 aaKnown RBP3.9□□□□□ -1.78
XRCC4-203ENST00000396027 UNKQ9C0B0 810 aaKnown RBP3.9□□□□□ -1.78
XRCC4-203ENST00000396027 YIPF3Q9GZM5 350 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 EPB41L1Q9H4G0 881 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 ST7Q9NRC1 585 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 PPP1R14DQ9NXH3 145 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 AIPL1Q9NZN9 384 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 TBC1D7Q9P0N9 293 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 BTBD7Q9P203 1132 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 MTRF1LQ9UGC7 380 aaKnown RBP3.9□□□□□ -1.78
XRCC4-203ENST00000396027 RASAL2Q9UJF2 1139 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 CDC23Q9UJX2 597 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 TPCN1Q9ULQ1 816 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 APOBEC2Q9Y235 224 aaKnown RBP3.9□□□□□ -1.78
XRCC4-203ENST00000396027 CDHR2Q9BYE9 1310 aa3.9□□□□□ -1.78
XRCC4-203ENST00000396027 ABCC2Q92887 1545 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 PIK3C2GO75747 1445 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 UHRF1BP1Q6BDS2 1440 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 hCG_2014768A0A024R1R8 64 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.9□□□□□ -1.79
XRCC4-203ENST00000396027 PVALEFA0A1B0GWK0 134 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 WDR91A4D1P6 747 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 CTAGE15A4D2H0 777 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 EME2A4GXA9 379 aaPredicted RBP3.9□□□□□ -1.79
XRCC4-203ENST00000396027 CCDC69A6NI79 296 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 TNFRSF10BO14763 440 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 NVLO15381 856 aaKnown RBP3.9□□□□□ -1.79
XRCC4-203ENST00000396027 RNMTO43148 476 aaKnown RBP3.9□□□□□ -1.79
XRCC4-203ENST00000396027 TSC22D2O75157 780 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 PRPF6O94906 941 aaKnown RBP3.9□□□□□ -1.79
XRCC4-203ENST00000396027 LCA5LO95447 670 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 FGFR1OPO95684 399 aaKnown RBP3.9□□□□□ -1.79
XRCC4-203ENST00000396027 ITGB3P05106 788 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 CTAGE8P0CG41 777 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 CYP2C9P11712 490 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 CASP14P31944 242 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 PHBP35232 272 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 GEMIN4P57678 1058 aaKnown RBP3.9□□□□□ -1.79
XRCC4-203ENST00000396027 KRT85P78386 507 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 GPSM2P81274 684 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 ATP8B2P98198 1209 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 SOX4Q06945 474 aaPredicted RBP3.9□□□□□ -1.79
XRCC4-203ENST00000396027 C19orf57Q0VDD7 668 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 MRPL28Q13084 256 aaKnown RBP3.9□□□□□ -1.79
XRCC4-203ENST00000396027 MSLNQ13421 630 aaPredicted RBP3.9□□□□□ -1.79
XRCC4-203ENST00000396027 RAPGEF1Q13905 1077 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 MVPQ14764 893 aaKnown RBP3.9□□□□□ -1.79
XRCC4-203ENST00000396027 STX1AQ16623 288 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 ANKRD20A8PQ5CZ79 823 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 EXOSC6Q5RKV6 272 aaKnown RBP3.9□□□□□ -1.79
XRCC4-203ENST00000396027 CFAP58Q5T655 872 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 TMEM164Q5U3C3 297 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 PPP4R4Q6NUP7 873 aa3.9□□□□□ -1.79
XRCC4-203ENST00000396027 EMBQ6PCB8 327 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms