RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 ROPN1BQ9BZX4 212 aaPredicted RBP16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 ROPN1Q9HAT0 212 aaPredicted RBP16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 SNX5Q9Y5X3 404 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 CDK12Q9NYV4 1490 aaPredicted RBP16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 LRRIQ4A6NIV6 560 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 CTDNEP1O95476 244 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 EZH2Q15910 746 aaKnown RBP16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 MDH1BQ5I0G3 518 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 JAMLQ86YT9 394 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 PIGOQ8TEQ8 1089 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 TRIM9Q9C026 710 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 GOLGA8RI6L899 631 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 ZCCHC18P0CG32 403 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 KLRC1P26715 233 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 BTDP43251 543 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 ZCWPW2Q504Y3 356 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 JDP2Q8WYK2 163 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 TSSK1BQ9BXA7 367 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 TMBIM4Q9HC24 238 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 MRPL11Q9Y3B7 192 aaKnown RBP16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 ABCC3O15438 1527 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 PFASO15067 1338 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 BTKQ06187 659 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 RCN1Q15293 331 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 BARGINQ6ZT62 677 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 ACAD11Q709F0 780 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 DGKHQ86XP1 1220 aa16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 ZKSCAN4Q969J2 545 aaPredicted RBP16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 MAGED2Q9UNF1 606 aaPredicted RBP16.56■□□□□ 0.24
SPOCK1-202ENST00000394945 NLRP1Q9C000 1473 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 USP42Q9H9J4 1324 aaKnown RBP16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 CAPN9O14815 690 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 SLC16A2P36021 539 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 ENAHQ8N8S7 591 aaPredicted RBP16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 MTA3Q9BTC8 594 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 TRIM15Q9C019 465 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 CHMP2BQ9UQN3 213 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 L3MBTL1Q9Y468 752 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 DUSP10Q9Y6W6 482 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 NPHP4O75161 1426 aaPredicted RBP16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 E9PMD0 336 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 TARSP26639 723 aaKnown RBP16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 TBC1D9BQ66K14 1250 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 EP400NLQ6ZTU2 488 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 B4GALNT2Q8NHY0 566 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 ASCC2Q9H1I8 757 aaPredicted RBP16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 GOLGA8IPA6NC78 632 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 GOLGA8JA6NMD2 632 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 ADCY3O60266 1144 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 PHF2O75151 1096 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 FSBPO95073 299 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 MYBL1P10243 752 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 KPNA2P52292 529 aaKnown RBP16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 ALDH18A1P54886 795 aaKnown RBP16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 KYNUQ16719 465 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 HPS3Q969F9 1004 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 DDX20Q9UHI6 824 aaKnown RBP16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 TRIM33Q9UPN9 1127 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 ATP10DQ9P241 1426 aa16.55■□□□□ 0.24
SPOCK1-202ENST00000394945 USP17L3A6NCW0 530 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 USP17L4A6NCW7 530 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 FAM205CA6NFA0 338 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 SYCE1LA8MT33 242 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 PI4K2BG5E9Z4 385 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 UBOX5O94941 541 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 GALCP54803 685 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 KNOP1Q1ED39 458 aaKnown RBP16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 USP17L1Q7RTZ2 530 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 SLC17A8Q8NDX2 589 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 RIOK1Q9BRS2 568 aaKnown RBP16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 WDR11Q9BZH6 1224 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 ZWILCHQ9H900 591 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 MRPL40Q9NQ50 206 aaKnown RBP16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 DDX28Q9NUL7 540 aaKnown RBP16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 CCNL1Q9UK58 526 aaPredicted RBP16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 SATB2Q9UPW6 733 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 C15orf41Q9Y2V0 281 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 NAB2Q15742 525 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 KIFC3Q9BVG8 833 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 CCDC90BQ9GZT6 254 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 LACRTQ9GZZ8 138 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 EHD4Q9H223 541 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 ZNF229Q9UJW7 825 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 MAP3K15Q6ZN16 1313 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 USP17L8P0C7I0 530 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 GCLMP48507 274 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 THOC5Q13769 683 aaKnown RBP16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 SWT1Q5T5J6 900 aaKnown RBP16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 RAB44Q7Z6P3 723 aaPredicted RBP16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 FUKQ8N0W3 1084 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 TTC13Q8NBP0 860 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 ATL2Q8NHH9 583 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 RBM17Q96I25 401 aaKnown RBP16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 SYNJ2BP-COX16A0A087WUM0 186 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 PPM1FP49593 454 aaPredicted RBP16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 DNAJC3Q13217 504 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 MORF4L2Q15014 288 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 DYNLL2Q96FJ2 89 aa16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 CDCA7Q9BWT1 371 aaPredicted RBP16.54■□□□□ 0.24
SPOCK1-202ENST00000394945 VPS11Q9H270 941 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms