RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 SPOPLQ6IQ16 392 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 NIPA1Q7RTP0 329 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 C7orf31Q8N865 590 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 RDH13Q8NBN7 331 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 LPAR1Q92633 364 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 CCDC51Q96ER9 411 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 DHX33Q9H6R0 707 aaKnown RBP9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 ARHGEF10LQ9HCE6 1279 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 RNF146Q9NTX7 359 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 GOLGA8IPA6NC78 632 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 SPDYE3A6NKU9 549 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 GOLGA8JA6NMD2 632 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 FTCDO95954 541 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 SSBP05455 408 aaKnown RBP eCLIP9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 NAB2Q15742 525 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 FRMD5Q7Z6J6 570 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 DBR1Q9UK59 544 aaKnown RBP9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 FBXL5Q9UKA1 691 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 H0YGN5 161 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 RPS12P25398 132 aaKnown RBP9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 CST9Q5W186 159 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 LMBRD2Q68DH5 695 aaPredicted RBP9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 CEP120Q8N960 986 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 NT5C3AQ9H0P0 336 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 RNF216Q9NWF9 866 aaPredicted RBP9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 FLRT1Q9NZU1 646 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 PPP1R1BQ9UD71 204 aaPredicted RBP9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 NFS1Q9Y697 457 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 STYXL1Q9Y6J8 313 aa9.26□□□□□ -0.93
GAPVD1-204ENST00000394083 KDM3AQ9Y4C1 1321 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 LAMA5O15230 3695 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 ESYT3A0FGR9 886 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 GLRA2P23416 452 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 NLRP11P59045 1033 aaKnown RBP9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 PLS1Q14651 629 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 AMHR2Q16671 573 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 C4orf19Q8IY42 314 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 KIAA0319LQ8IZA0 1049 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 OGFOD1Q8N543 542 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 WDTC1Q8N5D0 677 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 OR5B17Q8NGF7 314 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 AENQ8WTP8 325 aaKnown RBP9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 DACH1Q9UI36 760 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 COQ4Q9Y3A0 265 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 PCDHB13Q9Y5F0 798 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 MYPNQ86TC9 1320 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 EIF3DO15371 548 aaKnown RBP eCLIP9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 MSCO60682 206 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 PALMO75781 387 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 GCNT3O95395 438 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 FOSP01100 380 aaPredicted RBP9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 FMO1Q01740 532 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 TAPT1Q6NXT6 567 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 TTC27Q6P3X3 843 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 CYFIP1Q7L576 1253 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 ARFGAP1Q8N6T3 406 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 TAS1R2Q8TE23 839 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 EPS8L1Q8TE68 723 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 OSBPL9Q96SU4 736 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 THAP2Q9H0W7 228 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 MMRN2Q9H8L6 949 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 PTPRHQ9HD43 1115 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 SCN5AQ14524 2016 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 GAS7O60861 476 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 CSDE1O75534 798 aaKnown RBP9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 SGPL1O95470 568 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 CYP2C8P10632 490 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 PEX5P50542 639 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 TRNP1Q6NT89 227 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 GLYCTKQ8IVS8 523 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 ZIC5Q96T25 663 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 TANGO6Q9C0B7 1094 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 MYO6Q9UM54 1294 aa9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 NYNRINQ9P2P1 1898 aaKnown RBP9.25□□□□□ -0.93
GAPVD1-204ENST00000394083 IGKV6-21A0A0C4DH24 114 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 GJB6O95452 261 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 TRIM21P19474 475 aaKnown RBP9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 NT5DC3Q86UY8 548 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 PARD3BQ8TEW8 1205 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 MOV10L1Q9BXT6 1211 aaKnown RBP9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 RNPEPQ9H4A4 650 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 DNM3Q9UQ16 869 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 SSU72P8A0A1W2PR75 194 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 SSTR3P32745 418 aaPredicted RBP9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 PSMC4P43686 418 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 ACTR2P61160 394 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 ARID5AQ03989 594 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 HSP90AA2PQ14568 343 aaPredicted RBP9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 LDLRAD1Q5T700 205 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 HES6Q96HZ4 224 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 TXLNGYQ9BZA5 131 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 TDRD15B5MCY1 1934 aaKnown RBP9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 DCDC2CA8MYV0 355 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 B4GALT5O43286 388 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 ARL2P36404 184 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 MTIF2P46199 727 aaKnown RBP9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 BFSP1Q12934 665 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 TDRD10Q5VZ19 366 aaKnown RBP9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 TXNRD3NBQ6F5E7 133 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 ZNF746Q6NUN9 644 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms