RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 RNF180Q86T96 592 aa6□□□□□ -1.45
ECHDC1-204ENST00000368292 LRRTM3Q86VH5 581 aa6□□□□□ -1.45
ECHDC1-204ENST00000368292 WDR75Q8IWA0 830 aaKnown RBP6□□□□□ -1.45
ECHDC1-204ENST00000368292 CHPFQ8IZ52 775 aa6□□□□□ -1.45
ECHDC1-204ENST00000368292 UBR7Q8N806 425 aa6□□□□□ -1.45
ECHDC1-204ENST00000368292 CCDC89Q8N998 374 aa6□□□□□ -1.45
ECHDC1-204ENST00000368292 LSM14AQ8ND56 463 aaKnown RBP6□□□□□ -1.45
ECHDC1-204ENST00000368292 PLEKHO2Q8TD55 490 aa6□□□□□ -1.45
ECHDC1-204ENST00000368292 SCLYQ96I15 445 aa6□□□□□ -1.45
ECHDC1-204ENST00000368292 CAAP1Q9H8G2 361 aa6□□□□□ -1.45
ECHDC1-204ENST00000368292 INTS7Q9NVH2 962 aaKnown RBP6□□□□□ -1.45
ECHDC1-204ENST00000368292 NDOR1Q9UHB4 597 aa6□□□□□ -1.45
ECHDC1-204ENST00000368292 LZTS1Q9Y250 596 aa6□□□□□ -1.45
ECHDC1-204ENST00000368292 RWDD3Q9Y3V2 267 aa6□□□□□ -1.45
ECHDC1-204ENST00000368292 MYH14Q7Z406 1995 aaKnown RBP6□□□□□ -1.45
ECHDC1-204ENST00000368292 COL5A3P25940 1745 aaPredicted RBP5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 NUDT19A8MXV4 375 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 MEFVO15553 781 aaPredicted RBP5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 SRGAP3O43295 1099 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 NPHS1O60500 1241 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 HMMRO75330 724 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 LCP1P13796 627 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 ATICP31939 592 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 VIPR1P32241 457 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 TDO2P48775 406 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 PSMC1P62191 440 aaKnown RBP5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 RAB3GAP1Q15042 981 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 ZNF124Q15973 351 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 CDC37Q16543 378 aaPredicted RBP5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 IQCEQ6IPM2 695 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 FERMT3Q86UX7 667 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 PPIL6Q8IXY8 311 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 LZTR1Q8N653 840 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 KCNH5Q8NCM2 988 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 RCBTB1Q8NDN9 531 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 BHLHE22Q8NFJ8 381 aaPredicted RBP5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 DDX1Q92499 740 aaKnown RBP5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 RETREG1Q9H6L5 497 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 GCM1Q9NP62 436 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 RAPGEFL1Q9UHV5 662 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 NPFFR2Q9Y5X5 522 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 HCFC2Q9Y5Z7 792 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 HTTP42858 3142 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 NRXN2Q9P2S2 1712 aa5.99□□□□□ -1.45
ECHDC1-204ENST00000368292 PAPPA2Q9BXP8 1791 aa5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 TEX51A0A1B0GUA7 166 aa5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 DYTNA2CJ06 578 aa5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 ETV2O00321 342 aaPredicted RBP5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 KRT18P05783 430 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 MED14OSP0DP75 135 aa5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 CNGA1P29973 690 aa5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 FLT3P36888 993 aa5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 TRAPPC10P48553 1259 aa5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 CDKN1CP49918 316 aaPredicted RBP5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 BICRALQ6AI39 1079 aa5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 PPP4R4Q6NUP7 873 aa5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 CNNM4Q6P4Q7 775 aa5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 PAQR3Q6TCH7 311 aa5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 DIO2Q92813 273 aa5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 PTPRN2Q92932 1015 aa5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 SGPP1Q9BX95 441 aa5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 GOLGA2P5Q9HBQ8 144 aa5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 MBD1Q9UIS9 605 aaPredicted RBP5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 FBXL7Q9UJT9 491 aa5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 MAPRE3Q9UPY8 281 aa5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 ATP8A1Q9Y2Q0 1164 aa5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 TRAF6Q9Y4K3 522 aa5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 TNPO3Q9Y5L0 923 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 RBBP6Q7Z6E9 1792 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-204ENST00000368292 COL11A2P13942 1736 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 INSRP06213 1382 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 SPTBN5Q9NRC6 3674 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 CACNA1SQ13698 1873 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 TRAF5O00463 557 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 ABLIM1O14639 778 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 TBX3O15119 743 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 EFCAB14O75071 495 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 FUCA1P04066 466 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 CYBBP04839 570 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 C1QTNF9P0C862 333 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 SOX5P35711 763 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 LTBRP36941 435 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 ANP32AP39687 249 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 MAPKAPK2P49137 400 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 SRSF3P84103 164 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 KCNAB2Q13303 367 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 ZNF460Q14592 562 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 NR1I3Q14994 352 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 PPP2R5AQ15172 486 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 ALDH1L2Q3SY69 923 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 PLEKHN1Q494U1 663 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 C1QTNF12Q5T7M4 302 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 STYK1Q6J9G0 422 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 KCNT2Q6UVM3 1135 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 USP53Q70EK8 1073 aa5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 MAMDC2Q7Z304 686 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 CTU1Q7Z7A3 348 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-204ENST00000368292 DDX42Q86XP3 938 aaKnown RBP eCLIP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms