RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 RINT1Q6NUQ1 792 aa22.04■■□□□ 1.12
H3F3A-204ENST00000366816 TMEM192Q8IY95 271 aa22.04■■□□□ 1.12
H3F3A-204ENST00000366816 MAFAQ8NHW3 353 aaPredicted RBP22.04■■□□□ 1.12
H3F3A-204ENST00000366816 PPM1EQ8WY54 764 aa22.04■■□□□ 1.12
H3F3A-204ENST00000366816 CPB2Q96IY4 423 aa22.04■■□□□ 1.12
H3F3A-204ENST00000366816 NT5C3AQ9H0P0 336 aa22.04■■□□□ 1.12
H3F3A-204ENST00000366816 ELAC1Q9H777 363 aaKnown RBP22.04■■□□□ 1.12
H3F3A-204ENST00000366816 RNF19AQ9NV58 838 aa22.04■■□□□ 1.12
H3F3A-204ENST00000366816 SRPRBQ9Y5M8 271 aaKnown RBP22.04■■□□□ 1.12
H3F3A-204ENST00000366816 TSPAN1O60635 241 aa22.03■■□□□ 1.12
H3F3A-204ENST00000366816 LPXNO60711 386 aa22.03■■□□□ 1.12
H3F3A-204ENST00000366816 ERLIN2O94905 339 aa22.03■■□□□ 1.12
H3F3A-204ENST00000366816 ATF7P17544 494 aaPredicted RBP22.03■■□□□ 1.12
H3F3A-204ENST00000366816 RAD51AP2Q09MP3 1159 aa22.03■■□□□ 1.12
H3F3A-204ENST00000366816 CCDC85BQ15834 202 aaPredicted RBP22.03■■□□□ 1.12
H3F3A-204ENST00000366816 C1orf186Q6ZWK4 172 aa22.03■■□□□ 1.12
H3F3A-204ENST00000366816 IFNLR1Q8IU57 520 aaPredicted RBP22.03■■□□□ 1.12
H3F3A-204ENST00000366816 CMTR2Q8IYT2 770 aaKnown RBP22.03■■□□□ 1.12
H3F3A-204ENST00000366816 FBXO22Q8NEZ5 403 aa22.03■■□□□ 1.12
H3F3A-204ENST00000366816 LPPQ93052 612 aa22.03■■□□□ 1.12
H3F3A-204ENST00000366816 CALML4Q96GE6 196 aa22.03■■□□□ 1.12
H3F3A-204ENST00000366816 HCSTQ9UBK5 93 aa22.03■■□□□ 1.12
H3F3A-204ENST00000366816 B4GALT5O43286 388 aa22.02■■□□□ 1.12
H3F3A-204ENST00000366816 HIP1RO75146 1068 aa22.02■■□□□ 1.12
H3F3A-204ENST00000366816 PLA2G4BP0C869 781 aa22.02■■□□□ 1.12
H3F3A-204ENST00000366816 NASPP49321 788 aaPredicted RBP22.02■■□□□ 1.12
H3F3A-204ENST00000366816 SLC12A3P55017 1021 aa22.02■■□□□ 1.12
H3F3A-204ENST00000366816 DHX8Q14562 1220 aaKnown RBP22.02■■□□□ 1.12
H3F3A-204ENST00000366816 AMHR2Q16671 573 aa22.02■■□□□ 1.12
H3F3A-204ENST00000366816 ZNF598Q86UK7 904 aaKnown RBP22.02■■□□□ 1.12
H3F3A-204ENST00000366816 DAW1Q8N136 415 aa22.02■■□□□ 1.12
H3F3A-204ENST00000366816 MICALL1Q8N3F8 863 aa22.02■■□□□ 1.12
H3F3A-204ENST00000366816 RASSF8Q8NHQ8 419 aa22.02■■□□□ 1.12
H3F3A-204ENST00000366816 ZNF396Q96N95 335 aaPredicted RBP22.02■■□□□ 1.12
H3F3A-204ENST00000366816 KIFC3Q9BVG8 833 aa22.02■■□□□ 1.12
H3F3A-204ENST00000366816 FAM105AQ9NUU6 356 aa22.02■■□□□ 1.12
H3F3A-204ENST00000366816 RNF216Q9NWF9 866 aaPredicted RBP22.02■■□□□ 1.12
H3F3A-204ENST00000366816 NPHP3-ACAD11A0A0J9YXS1 232 aa22.01■■□□□ 1.11
H3F3A-204ENST00000366816 MEIS3P2A8K0S8 358 aa22.01■■□□□ 1.11
H3F3A-204ENST00000366816 SFI1A8K8P3 1242 aa22.01■■□□□ 1.11
H3F3A-204ENST00000366816 PDIA4P13667 645 aaKnown RBP22.01■■□□□ 1.11
H3F3A-204ENST00000366816 LIG1P18858 919 aa22.01■■□□□ 1.11
H3F3A-204ENST00000366816 PLCG1P19174 1290 aa22.01■■□□□ 1.11
H3F3A-204ENST00000366816 CTNNB1P35222 781 aa22.01■■□□□ 1.11
H3F3A-204ENST00000366816 STK38Q15208 465 aa22.01■■□□□ 1.11
H3F3A-204ENST00000366816 CLLU1OSQ5K130 101 aa22.01■■□□□ 1.11
H3F3A-204ENST00000366816 UBXN11Q5T124 520 aa22.01■■□□□ 1.11
H3F3A-204ENST00000366816 CDR2LQ86X02 465 aaPredicted RBP22.01■■□□□ 1.11
H3F3A-204ENST00000366816 SYT2Q8N9I0 419 aaPredicted RBP22.01■■□□□ 1.11
H3F3A-204ENST00000366816 LINC00301Q8NCQ3 95 aa22.01■■□□□ 1.11
H3F3A-204ENST00000366816 SYMPKQ92797 1274 aaKnown RBP22.01■■□□□ 1.11
H3F3A-204ENST00000366816 KIFAP3Q92845 792 aa22.01■■□□□ 1.11
H3F3A-204ENST00000366816 CLP1Q92989 425 aaKnown RBP22.01■■□□□ 1.11
H3F3A-204ENST00000366816 CASD1Q96PB1 797 aa22.01■■□□□ 1.11
H3F3A-204ENST00000366816 NFKBIZQ9BYH8 718 aa22.01■■□□□ 1.11
H3F3A-204ENST00000366816 USP20Q9Y2K6 914 aa22.01■■□□□ 1.11
H3F3A-204ENST00000366816 MTCH2Q9Y6C9 303 aa22.01■■□□□ 1.11
H3F3A-204ENST00000366816 EYSQ5T1H1 3165 aa22■■□□□ 1.11
H3F3A-204ENST00000366816 EOMESO95936 686 aa22■■□□□ 1.11
H3F3A-204ENST00000366816 ARF4P18085 180 aaPredicted RBP22■■□□□ 1.11
H3F3A-204ENST00000366816 BMPR1AP36894 532 aa22■■□□□ 1.11
H3F3A-204ENST00000366816 NAMPTP43490 491 aa22■■□□□ 1.11
H3F3A-204ENST00000366816 CACNB1Q02641 598 aaPredicted RBP22■■□□□ 1.11
H3F3A-204ENST00000366816 CDCA2Q69YH5 1023 aaPredicted RBP22■■□□□ 1.11
H3F3A-204ENST00000366816 DEPTORQ8TB45 409 aa22■■□□□ 1.11
H3F3A-204ENST00000366816 HELQQ8TDG4 1101 aa22■■□□□ 1.11
H3F3A-204ENST00000366816 IFT74Q96LB3 600 aa22■■□□□ 1.11
H3F3A-204ENST00000366816 SAMD11Q96NU1 681 aa22■■□□□ 1.11
H3F3A-204ENST00000366816 TRAIPQ9BWF2 469 aa22■■□□□ 1.11
H3F3A-204ENST00000366816 EIF2AQ9BY44 585 aaKnown RBP22■■□□□ 1.11
H3F3A-204ENST00000366816 CCSER1Q9C0I3 900 aa22■■□□□ 1.11
H3F3A-204ENST00000366816 BLOC1S4Q9NUP1 217 aa22■■□□□ 1.11
H3F3A-204ENST00000366816 TYW1Q9NV66 732 aaKnown RBP22■■□□□ 1.11
H3F3A-204ENST00000366816 ZDHHC9Q9Y397 364 aa22■■□□□ 1.11
H3F3A-204ENST00000366816 PCDHB2Q9Y5E7 798 aa22■■□□□ 1.11
H3F3A-204ENST00000366816 TTLL13PA6NNM8 815 aa21.99■■□□□ 1.11
H3F3A-204ENST00000366816 PEX3P56589 373 aa21.99■■□□□ 1.11
H3F3A-204ENST00000366816 MAPK7Q13164 816 aa21.99■■□□□ 1.11
H3F3A-204ENST00000366816 GPM6BQ13491 265 aa21.99■■□□□ 1.11
H3F3A-204ENST00000366816 MCM6Q14566 821 aa21.99■■□□□ 1.11
H3F3A-204ENST00000366816 ARSHQ5FYA8 562 aa21.99■■□□□ 1.11
H3F3A-204ENST00000366816 LRRC55Q6ZSA7 311 aa21.99■■□□□ 1.11
H3F3A-204ENST00000366816 ZBTB8OSQ8IWT0 167 aa21.99■■□□□ 1.11
H3F3A-204ENST00000366816 KCTD17Q8N5Z5 321 aa21.99■■□□□ 1.11
H3F3A-204ENST00000366816 KRI1Q8N9T8 703 aaKnown RBP21.99■■□□□ 1.11
H3F3A-204ENST00000366816 PANK2Q9BZ23 570 aa21.99■■□□□ 1.11
H3F3A-204ENST00000366816 TMEM117Q9H0C3 514 aa21.99■■□□□ 1.11
H3F3A-204ENST00000366816 TRANK1O15050 2925 aa21.98■■□□□ 1.11
H3F3A-204ENST00000366816 CCDC169A6NNP5 214 aa21.98■■□□□ 1.11
H3F3A-204ENST00000366816 H3BNC9 293 aa21.98■■□□□ 1.11
H3F3A-204ENST00000366816 SPTLC2O15270 562 aa21.98■■□□□ 1.11
H3F3A-204ENST00000366816 SLC26A4O43511 780 aa21.98■■□□□ 1.11
H3F3A-204ENST00000366816 GTPBP6O43824 516 aaPredicted RBP21.98■■□□□ 1.11
H3F3A-204ENST00000366816 NCBP1Q09161 790 aaKnown RBP21.98■■□□□ 1.11
H3F3A-204ENST00000366816 BECN1Q14457 450 aa21.98■■□□□ 1.11
H3F3A-204ENST00000366816 PPP2R5AQ15172 486 aa21.98■■□□□ 1.11
H3F3A-204ENST00000366816 PCBP1Q15365 356 aaKnown RBP eCLIP21.98■■□□□ 1.11
H3F3A-204ENST00000366816 SPOUT1Q5T280 376 aaKnown RBP21.98■■□□□ 1.11
H3F3A-204ENST00000366816 ABI1Q8IZP0 508 aa21.98■■□□□ 1.11
H3F3A-204ENST00000366816 SLC17A8Q8NDX2 589 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms