RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 ITGB5P18084 799 aa11.21□□□□□ -0.61
ABCF1-201ENST00000326195 GUCY2FP51841 1108 aa11.21□□□□□ -0.61
ABCF1-201ENST00000326195 IGBP1P78318 339 aa11.21□□□□□ -0.61
ABCF1-201ENST00000326195 PRKCZQ05513 592 aa11.21□□□□□ -0.61
ABCF1-201ENST00000326195 ITGB3BPQ13352 177 aaPredicted RBP11.21□□□□□ -0.61
ABCF1-201ENST00000326195 MTMR1Q13613 665 aa11.21□□□□□ -0.61
ABCF1-201ENST00000326195 PLEKHH3Q7Z736 793 aa11.21□□□□□ -0.61
ABCF1-201ENST00000326195 ANKRD23Q86SG2 305 aa11.21□□□□□ -0.61
ABCF1-201ENST00000326195 MAGEC3Q8TD91 643 aa11.21□□□□□ -0.61
ABCF1-201ENST00000326195 NOC3LQ8WTT2 800 aaKnown RBP11.21□□□□□ -0.61
ABCF1-201ENST00000326195 NUDT12Q9BQG2 462 aa11.21□□□□□ -0.61
ABCF1-201ENST00000326195 PDCD2LQ9BRP1 358 aa11.21□□□□□ -0.61
ABCF1-201ENST00000326195 NOD2Q9HC29 1040 aa11.21□□□□□ -0.61
ABCF1-201ENST00000326195 NFU1Q9UMS0 254 aa11.21□□□□□ -0.61
ABCF1-201ENST00000326195 RANBP2P49792 3224 aaKnown RBP11.21□□□□□ -0.61
ABCF1-201ENST00000326195 SOWAHBA6NEL2 793 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 ATP6V1G2O95670 118 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 CTGFP29279 349 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 ELF3P78545 371 aaPredicted RBP11.21□□□□□ -0.62
ABCF1-201ENST00000326195 SP3Q02447 781 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 KIF5AQ12840 1032 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 ENOX2Q16206 610 aaKnown RBP11.21□□□□□ -0.62
ABCF1-201ENST00000326195 TDRD12Q587J7 1177 aaKnown RBP11.21□□□□□ -0.62
ABCF1-201ENST00000326195 DYMQ7RTS9 669 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 TRIM50Q86XT4 487 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 MMGT1Q8N4V1 131 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 REPS2Q8NFH8 660 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 MTMR8Q96EF0 704 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 RPGRIP1Q96KN7 1286 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 SH3GL3Q99963 347 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 MLXIPQ9HAP2 919 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 KCNH7Q9NS40 1196 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 IRAK4Q9NWZ3 460 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 LRWD1Q9UFC0 647 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 FGFR1OPO95684 399 aaKnown RBP11.21□□□□□ -0.62
ABCF1-201ENST00000326195 EPHB4P54760 987 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 MRPS9P82933 396 aaKnown RBP11.21□□□□□ -0.62
ABCF1-201ENST00000326195 ZC3H12AQ5D1E8 599 aaKnown RBP11.21□□□□□ -0.62
ABCF1-201ENST00000326195 NFRKBQ6P4R8 1299 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 EHBP1Q8NDI1 1231 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 NPLOC4Q8TAT6 608 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 SH3TC2Q8TF17 1288 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 TSG101Q99816 390 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 PXMP2Q9NR77 195 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 CAPN6Q9Y6Q1 641 aa11.21□□□□□ -0.62
ABCF1-201ENST00000326195 OR52Z1P0C646 297 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 HSPA6P17066 643 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 ADCYAP1R1P41586 468 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 DNA2P51530 1060 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 KIF22Q14807 665 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 CEP55Q53EZ4 464 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 SV2BQ7L1I2 683 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 RIOX2Q8IUF8 465 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 AGPAT5Q9NUQ2 364 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 TBC1D7Q9P0N9 293 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 LAMB1P07942 1786 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 B4DLN1 442 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 CA12O43570 354 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 NCK2O43639 380 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 DNM2P50570 870 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 SLC8A3P57103 927 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 PGM5Q15124 567 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 KRT79Q5XKE5 535 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 OR2W6PQ8NHA6 318 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 RAET1EQ8TD07 263 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 SNX29Q8TEQ0 813 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 ZNF296Q8WUU4 475 aaPredicted RBP11.2□□□□□ -0.62
ABCF1-201ENST00000326195 IFT81Q8WYA0 676 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 MS4A14Q96JA4 679 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 ZNF570Q96NI8 536 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 SH3GLB2Q9NR46 395 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 LAMA3Q16787 3333 aa11.2□□□□□ -0.62
ABCF1-201ENST00000326195 WDR90Q96KV7 1748 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 IPO5O00410 1097 aaKnown RBP11.19□□□□□ -0.62
ABCF1-201ENST00000326195 ZNF263O14978 683 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 MSH4O15457 936 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 DYNC1LI2O43237 492 aaPredicted RBP11.19□□□□□ -0.62
ABCF1-201ENST00000326195 KLK7P49862 253 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 XRCC4Q13426 336 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 IQCEQ6IPM2 695 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 NLRX1Q86UT6 975 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 TUBGCP2Q9BSJ2 902 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 YIPF3Q9GZM5 350 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 RBM12Q9NTZ6 932 aaKnown RBP11.19□□□□□ -0.62
ABCF1-201ENST00000326195 STIM2Q9P246 746 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 MYH6P13533 1939 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 LRRC10BA6NIK2 292 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 SFI1A8K8P3 1242 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 ANP32DO95626 131 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 GCLCP48506 637 aaPredicted RBP11.19□□□□□ -0.62
ABCF1-201ENST00000326195 STXBP2Q15833 593 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 IL17AQ16552 155 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 GALNT17Q6IS24 598 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 HIBCHQ6NVY1 386 aaPredicted RBP11.19□□□□□ -0.62
ABCF1-201ENST00000326195 MIS18BP1Q6P0N0 1132 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 CNNM4Q6P4Q7 775 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 MB21D1Q8N884 522 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 GLG1Q92896 1179 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 CAVIN3Q969G5 261 aa11.19□□□□□ -0.62
ABCF1-201ENST00000326195 SAAL1Q96ER3 474 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms