RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 SPC25Q9HBM1 224 aa24.69■■□□□ 1.54
IRF3-201ENST00000309877 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.69■■□□□ 1.54
IRF3-201ENST00000309877 K7ERI5 159 aa24.68■■□□□ 1.54
IRF3-201ENST00000309877 ADCY3O60266 1144 aa24.68■■□□□ 1.54
IRF3-201ENST00000309877 EXOC3O60645 756 aa24.68■■□□□ 1.54
IRF3-201ENST00000309877 C6orf222P0C671 652 aaPredicted RBP24.68■■□□□ 1.54
IRF3-201ENST00000309877 CASP4P49662 377 aa24.68■■□□□ 1.54
IRF3-201ENST00000309877 CLCN3P51790 818 aa24.68■■□□□ 1.54
IRF3-201ENST00000309877 TFDP1Q14186 410 aa24.68■■□□□ 1.54
IRF3-201ENST00000309877 KIAA0753Q2KHM9 967 aa24.68■■□□□ 1.54
IRF3-201ENST00000309877 ARMCX5Q6P1M9 558 aa24.68■■□□□ 1.54
IRF3-201ENST00000309877 RHPN2Q8IUC4 686 aa24.68■■□□□ 1.54
IRF3-201ENST00000309877 C12orf56Q8IXR9 622 aa24.68■■□□□ 1.54
IRF3-201ENST00000309877 FAM186BQ8IYM0 893 aa24.68■■□□□ 1.54
IRF3-201ENST00000309877 MKNK1Q9BUB5 465 aa24.68■■□□□ 1.54
IRF3-201ENST00000309877 ITIH6Q6UXX5 1313 aa24.68■■□□□ 1.54
IRF3-201ENST00000309877 A0A1W2PQC6 194 aa24.67■■□□□ 1.54
IRF3-201ENST00000309877 RRN3P2A6NIE6 340 aa24.67■■□□□ 1.54
IRF3-201ENST00000309877 ASAP2O43150 1006 aa24.67■■□□□ 1.54
IRF3-201ENST00000309877 SRGAP2CP0DJJ0 459 aa24.67■■□□□ 1.54
IRF3-201ENST00000309877 RARBP10826 455 aa24.67■■□□□ 1.54
IRF3-201ENST00000309877 PRKAR2AP13861 404 aaKnown RBP24.67■■□□□ 1.54
IRF3-201ENST00000309877 TMOD1P28289 359 aa24.67■■□□□ 1.54
IRF3-201ENST00000309877 MFSD10Q14728 455 aa24.67■■□□□ 1.54
IRF3-201ENST00000309877 MTHFD1LQ6UB35 978 aa24.67■■□□□ 1.54
IRF3-201ENST00000309877 PPFIBP1Q86W92 1011 aa24.67■■□□□ 1.54
IRF3-201ENST00000309877 CCDC150Q8NCX0 1101 aa24.67■■□□□ 1.54
IRF3-201ENST00000309877 KAT2BQ92831 832 aa24.67■■□□□ 1.54
IRF3-201ENST00000309877 KCNN1Q92952 543 aa24.67■■□□□ 1.54
IRF3-201ENST00000309877 ZBTB10Q96DT7 871 aa24.67■■□□□ 1.54
IRF3-201ENST00000309877 PCIF1Q9H4Z3 704 aa24.67■■□□□ 1.54
IRF3-201ENST00000309877 TMEM134Q9H6X4 195 aa24.67■■□□□ 1.54
IRF3-201ENST00000309877 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.67■■□□□ 1.543e-7■■■□□ 15.9
IRF3-201ENST00000309877 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.67■■□□□ 1.54
IRF3-201ENST00000309877 TISP43B9A030 160 aa24.66■■□□□ 1.54
IRF3-201ENST00000309877 EFNA5P52803 228 aa24.66■■□□□ 1.54
IRF3-201ENST00000309877 TBX2Q13207 712 aaPredicted RBP24.66■■□□□ 1.54
IRF3-201ENST00000309877 TAS1R3Q7RTX0 852 aa24.66■■□□□ 1.54
IRF3-201ENST00000309877 ZBTB8OSQ8IWT0 167 aa24.66■■□□□ 1.54
IRF3-201ENST00000309877 RNF149Q8NC42 400 aa24.66■■□□□ 1.54
IRF3-201ENST00000309877 ZNF296Q8WUU4 475 aaPredicted RBP24.66■■□□□ 1.54
IRF3-201ENST00000309877 TMEM174Q8WUU8 243 aa24.66■■□□□ 1.54
IRF3-201ENST00000309877 CBWD1Q9BRT8 395 aa24.66■■□□□ 1.54
IRF3-201ENST00000309877 THSD7BQ9C0I4 1608 aa24.66■■□□□ 1.54
IRF3-201ENST00000309877 ANKRD63C9JTQ0 380 aa24.66■■□□□ 1.54
IRF3-201ENST00000309877 HNRNPDLO14979 420 aaKnown RBP24.66■■□□□ 1.54
IRF3-201ENST00000309877 KPNA6O60684 536 aa24.66■■□□□ 1.54
IRF3-201ENST00000309877 HMGCRP04035 888 aa24.66■■□□□ 1.54
IRF3-201ENST00000309877 PSEN2P49810 448 aa24.66■■□□□ 1.54
IRF3-201ENST00000309877 GJA9P57773 515 aa24.66■■□□□ 1.54
IRF3-201ENST00000309877 PPP2R3AQ06190 1150 aa24.66■■□□□ 1.54
IRF3-201ENST00000309877 KATNAL1Q9BW62 490 aa24.66■■□□□ 1.54
IRF3-201ENST00000309877 C2orf40Q9H1Z8 148 aa24.66■■□□□ 1.54
IRF3-201ENST00000309877 HSPBP1Q9NZL4 362 aa24.66■■□□□ 1.54
IRF3-201ENST00000309877 CASP8AP2Q9UKL3 1982 aa24.65■■□□□ 1.54
IRF3-201ENST00000309877 PHLPP2Q6ZVD8 1323 aa24.65■■□□□ 1.54
IRF3-201ENST00000309877 TPM1P09493 284 aa24.65■■□□□ 1.54
IRF3-201ENST00000309877 SMIM10L2AP0DMW4 78 aa24.65■■□□□ 1.54
IRF3-201ENST00000309877 SMIM10L2BP0DMW5 78 aa24.65■■□□□ 1.54
IRF3-201ENST00000309877 SFPQP23246 707 aaKnown RBP eCLIP24.65■■□□□ 1.54
IRF3-201ENST00000309877 LIG4P49917 911 aa24.65■■□□□ 1.54
IRF3-201ENST00000309877 ARID5BQ14865 1188 aa24.65■■□□□ 1.54
IRF3-201ENST00000309877 GNASQ5JWF2 1037 aa24.65■■□□□ 1.54
IRF3-201ENST00000309877 LRRC8AQ8IWT6 810 aa24.65■■□□□ 1.54
IRF3-201ENST00000309877 XXYLT1Q8NBI6 393 aa24.65■■□□□ 1.54
IRF3-201ENST00000309877 CACTINQ8WUQ7 758 aaKnown RBP24.65■■□□□ 1.54
IRF3-201ENST00000309877 PCMTD1Q96MG8 357 aaPredicted RBP24.65■■□□□ 1.54
IRF3-201ENST00000309877 SETD4Q9NVD3 440 aa24.65■■□□□ 1.54
IRF3-201ENST00000309877 NRCAMQ92823 1304 aa24.64■■□□□ 1.54
IRF3-201ENST00000309877 CCND3P30281 292 aaPredicted RBP24.64■■□□□ 1.53
IRF3-201ENST00000309877 PXYLP1Q8TE99 480 aa24.64■■□□□ 1.53
IRF3-201ENST00000309877 NLRP4Q96MN2 994 aa24.64■■□□□ 1.53
IRF3-201ENST00000309877 BEGAINQ9BUH8 593 aa24.64■■□□□ 1.53
IRF3-201ENST00000309877 AKT3Q9Y243 479 aa24.64■■□□□ 1.53
IRF3-201ENST00000309877 ZEB2O60315 1214 aa24.63■■□□□ 1.53
IRF3-201ENST00000309877 GJB1P08034 283 aa24.63■■□□□ 1.53
IRF3-201ENST00000309877 TRIM14Q14142 442 aa24.63■■□□□ 1.53
IRF3-201ENST00000309877 SYCP1Q15431 976 aa24.63■■□□□ 1.53
IRF3-201ENST00000309877 TCERG1LQ5VWI1 586 aa24.63■■□□□ 1.53
IRF3-201ENST00000309877 CDCA2Q69YH5 1023 aaPredicted RBP24.63■■□□□ 1.53
IRF3-201ENST00000309877 LINC01465Q8N7H1 131 aa24.63■■□□□ 1.53
IRF3-201ENST00000309877 RDH13Q8NBN7 331 aa24.63■■□□□ 1.53
IRF3-201ENST00000309877 POMGNT1Q8WZA1 660 aa24.63■■□□□ 1.53
IRF3-201ENST00000309877 ERGIC2Q96RQ1 377 aa24.63■■□□□ 1.53
IRF3-201ENST00000309877 UPF3AQ9H1J1 476 aaKnown RBP24.63■■□□□ 1.53
IRF3-201ENST00000309877 KCNF1Q9H3M0 494 aa24.63■■□□□ 1.53
IRF3-201ENST00000309877 HAS3O00219 553 aa24.62■■□□□ 1.53
IRF3-201ENST00000309877 PGK1P00558 417 aa24.62■■□□□ 1.53
IRF3-201ENST00000309877 ADSSP30520 456 aa24.62■■□□□ 1.53
IRF3-201ENST00000309877 PURAQ00577 322 aaKnown RBP24.62■■□□□ 1.53
IRF3-201ENST00000309877 KCNH2Q12809 1159 aa24.62■■□□□ 1.53
IRF3-201ENST00000309877 DCAF17Q5H9S7 520 aaPredicted RBP24.62■■□□□ 1.53
IRF3-201ENST00000309877 MARCH8Q5T0T0 291 aa24.62■■□□□ 1.53
IRF3-201ENST00000309877 ZSCAN30Q86W11 494 aa24.62■■□□□ 1.53
IRF3-201ENST00000309877 CPLX3Q8WVH0 158 aa24.62■■□□□ 1.53
IRF3-201ENST00000309877 LMBR1Q8WVP7 490 aa24.62■■□□□ 1.53
IRF3-201ENST00000309877 BORCS6Q96GS4 357 aa24.62■■□□□ 1.53
IRF3-201ENST00000309877 MAP7D2Q96T17 732 aa24.62■■□□□ 1.53
IRF3-201ENST00000309877 XPNPEP3Q9NQH7 507 aa24.62■■□□□ 1.53
IRF3-201ENST00000309877 ZKSCAN5Q9Y2L8 839 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms