RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 ATG7O95352 703 aa25.22■■□□□ 1.63
RAB40B-201ENST00000269347 ARIH2O95376 493 aa25.22■■□□□ 1.63
RAB40B-201ENST00000269347 PPP2R5AQ15172 486 aa25.22■■□□□ 1.63
RAB40B-201ENST00000269347 GNPTABQ3T906 1256 aa25.22■■□□□ 1.63
RAB40B-201ENST00000269347 GPR161Q8N6U8 529 aaKnown RBP25.22■■□□□ 1.63
RAB40B-201ENST00000269347 ATP6V0A1Q93050 837 aa25.22■■□□□ 1.63
RAB40B-201ENST00000269347 L3MBTL3Q96JM7 780 aaPredicted RBP25.22■■□□□ 1.63
RAB40B-201ENST00000269347 CEP89Q96ST8 783 aa25.22■■□□□ 1.63
RAB40B-201ENST00000269347 POP1Q99575 1024 aaKnown RBP25.22■■□□□ 1.63
RAB40B-201ENST00000269347 DDX41Q9UJV9 622 aaKnown RBP25.22■■□□□ 1.63
RAB40B-201ENST00000269347 KCNH4Q9UQ05 1017 aa25.22■■□□□ 1.63
RAB40B-201ENST00000269347 GSTTP1A0A1W2PQM5 241 aa25.22■■□□□ 1.63
RAB40B-201ENST00000269347 PRKCIP41743 596 aa25.22■■□□□ 1.63
RAB40B-201ENST00000269347 IRX3P78415 501 aaPredicted RBP25.22■■□□□ 1.63
RAB40B-201ENST00000269347 MYL7Q01449 175 aa25.22■■□□□ 1.63
RAB40B-201ENST00000269347 GPAT2Q6NUI2 795 aa25.22■■□□□ 1.63
RAB40B-201ENST00000269347 NFRKBQ6P4R8 1299 aa25.22■■□□□ 1.63
RAB40B-201ENST00000269347 MAP4K3Q8IVH8 894 aa25.22■■□□□ 1.63
RAB40B-201ENST00000269347 ARHGEF19Q8IW93 802 aa25.22■■□□□ 1.63
RAB40B-201ENST00000269347 GOLGA5Q8TBA6 731 aa25.22■■□□□ 1.63
RAB40B-201ENST00000269347 F8VZ95 297 aa25.21■■□□□ 1.63
RAB40B-201ENST00000269347 RHOXF2BP0C7M4 288 aa25.21■■□□□ 1.63
RAB40B-201ENST00000269347 CXCR5P32302 372 aa25.21■■□□□ 1.63
RAB40B-201ENST00000269347 VAMP7P51809 220 aa25.21■■□□□ 1.63
RAB40B-201ENST00000269347 DRAP1Q14919 205 aaPredicted RBP25.21■■□□□ 1.63
RAB40B-201ENST00000269347 XXYLT1Q8NBI6 393 aa25.21■■□□□ 1.63
RAB40B-201ENST00000269347 EHBP1Q8NDI1 1231 aa25.21■■□□□ 1.63
RAB40B-201ENST00000269347 LNX1Q8TBB1 728 aaPredicted RBP25.21■■□□□ 1.63
RAB40B-201ENST00000269347 TMEM174Q8WUU8 243 aa25.21■■□□□ 1.63
RAB40B-201ENST00000269347 KAT5Q92993 513 aa25.21■■□□□ 1.63
RAB40B-201ENST00000269347 RHOXF2Q9BQY4 288 aa25.21■■□□□ 1.63
RAB40B-201ENST00000269347 KMT5AQ9NQR1 393 aa25.21■■□□□ 1.63
RAB40B-201ENST00000269347 DDX3XO00571 662 aaKnown RBP eCLIP25.21■■□□□ 1.632e-22■■■■□ 20.3
RAB40B-201ENST00000269347 EVI5O60447 810 aa25.21■■□□□ 1.63
RAB40B-201ENST00000269347 STAM2O75886 525 aa25.21■■□□□ 1.63
RAB40B-201ENST00000269347 ZRANB2O95218 330 aaKnown RBP eCLIP25.21■■□□□ 1.63
RAB40B-201ENST00000269347 CNGA1P29973 690 aa25.21■■□□□ 1.63
RAB40B-201ENST00000269347 ALCAMQ13740 583 aa25.21■■□□□ 1.63
RAB40B-201ENST00000269347 LY6KQ17RY6 165 aa25.21■■□□□ 1.63
RAB40B-201ENST00000269347 TMEM143Q96AN5 459 aa25.21■■□□□ 1.63
RAB40B-201ENST00000269347 CDHR1Q96JP9 859 aa25.21■■□□□ 1.63
RAB40B-201ENST00000269347 NTPCRQ9BSD7 190 aaKnown RBP25.21■■□□□ 1.63
RAB40B-201ENST00000269347 TIPINQ9BVW5 301 aa25.21■■□□□ 1.63
RAB40B-201ENST00000269347 TOPORSQ9NS56 1045 aaPredicted RBP25.21■■□□□ 1.63
RAB40B-201ENST00000269347 MAFBQ9Y5Q3 323 aaPredicted RBP25.21■■□□□ 1.63
RAB40B-201ENST00000269347 POTEB2H3BUK9 544 aa25.2■■□□□ 1.62
RAB40B-201ENST00000269347 FARP2O94887 1054 aaPredicted RBP25.2■■□□□ 1.62
RAB40B-201ENST00000269347 MYBPC2Q14324 1141 aa25.2■■□□□ 1.62
RAB40B-201ENST00000269347 EAPPQ56P03 285 aaPredicted RBP25.2■■□□□ 1.62
RAB40B-201ENST00000269347 OTUD6AQ7L8S5 288 aa25.2■■□□□ 1.62
RAB40B-201ENST00000269347 TLR10Q9BXR5 811 aa25.2■■□□□ 1.62
RAB40B-201ENST00000269347 GOLPH3Q9H4A6 298 aa25.2■■□□□ 1.62
RAB40B-201ENST00000269347 RNF216Q9NWF9 866 aaPredicted RBP25.2■■□□□ 1.62
RAB40B-201ENST00000269347 OGFRQ9NZT2 677 aa25.2■■□□□ 1.62
RAB40B-201ENST00000269347 NAGPAQ9UK23 515 aa25.2■■□□□ 1.62
RAB40B-201ENST00000269347 AGTPBP1Q9UPW5 1226 aa25.2■■□□□ 1.62
RAB40B-201ENST00000269347 ANO9A1A5B4 782 aa25.2■■□□□ 1.62
RAB40B-201ENST00000269347 EDN1P05305 212 aa25.2■■□□□ 1.62
RAB40B-201ENST00000269347 DMP1Q13316 513 aaPredicted RBP25.2■■□□□ 1.62
RAB40B-201ENST00000269347 KIAA0753Q2KHM9 967 aa25.2■■□□□ 1.62
RAB40B-201ENST00000269347 MIS18BP1Q6P0N0 1132 aa25.2■■□□□ 1.62
RAB40B-201ENST00000269347 PALB2Q86YC2 1186 aa25.2■■□□□ 1.62
RAB40B-201ENST00000269347 CREG2Q8IUH2 290 aa25.2■■□□□ 1.62
RAB40B-201ENST00000269347 TRIM58Q8NG06 486 aa25.2■■□□□ 1.62
RAB40B-201ENST00000269347 POLR3FQ9H1D9 316 aaPredicted RBP25.2■■□□□ 1.62
RAB40B-201ENST00000269347 CTAGE15A4D2H0 777 aa25.19■■□□□ 1.62
RAB40B-201ENST00000269347 CTAGE8P0CG41 777 aa25.19■■□□□ 1.62
RAB40B-201ENST00000269347 TUBB2AQ13885 445 aa25.19■■□□□ 1.62
RAB40B-201ENST00000269347 NAB2Q15742 525 aa25.19■■□□□ 1.62
RAB40B-201ENST00000269347 ARHGAP44Q17R89 818 aa25.19■■□□□ 1.62
RAB40B-201ENST00000269347 USP50Q70EL3 339 aaPredicted RBP25.19■■□□□ 1.62
RAB40B-201ENST00000269347 CTAGE6Q86UF2 777 aa25.19■■□□□ 1.62
RAB40B-201ENST00000269347 CTAGE4Q8IX94 777 aa25.19■■□□□ 1.62
RAB40B-201ENST00000269347 SYT11Q9BT88 431 aa25.19■■□□□ 1.62
RAB40B-201ENST00000269347 TUBB2BQ9BVA1 445 aa25.19■■□□□ 1.62
RAB40B-201ENST00000269347 TMEM117Q9H0C3 514 aa25.19■■□□□ 1.62
RAB40B-201ENST00000269347 SNX12Q9UMY4 172 aa25.19■■□□□ 1.62
RAB40B-201ENST00000269347 IGKV6D-21A0A0A0MT36 114 aa25.18■■□□□ 1.62
RAB40B-201ENST00000269347 CXCL11O14625 94 aa25.18■■□□□ 1.62
RAB40B-201ENST00000269347 TACC1O75410 805 aa25.18■■□□□ 1.62
RAB40B-201ENST00000269347 EPC2Q52LR7 807 aa25.18■■□□□ 1.62
RAB40B-201ENST00000269347 ASAP3Q8TDY4 903 aa25.18■■□□□ 1.62
RAB40B-201ENST00000269347 SEMA4DQ92854 862 aa25.18■■□□□ 1.62
RAB40B-201ENST00000269347 ZNF302Q9NR11 478 aa25.18■■□□□ 1.62
RAB40B-201ENST00000269347 FAM53CQ9NYF3 392 aa25.18■■□□□ 1.62
RAB40B-201ENST00000269347 APEX2Q9UBZ4 518 aa25.18■■□□□ 1.62
RAB40B-201ENST00000269347 PACSIN2Q9UNF0 486 aaPredicted RBP25.18■■□□□ 1.62
RAB40B-201ENST00000269347 JRKLQ9Y4A0 524 aa25.18■■□□□ 1.62
RAB40B-201ENST00000269347 TULP1O00294 542 aaPredicted RBP25.18■■□□□ 1.62
RAB40B-201ENST00000269347 DGAT1O75907 488 aa25.18■■□□□ 1.62
RAB40B-201ENST00000269347 SASH3O75995 380 aa25.18■■□□□ 1.62
RAB40B-201ENST00000269347 SOX5P35711 763 aa25.18■■□□□ 1.62
RAB40B-201ENST00000269347 WNT7BP56706 349 aa25.18■■□□□ 1.62
RAB40B-201ENST00000269347 INTS8Q75QN2 995 aaKnown RBP25.18■■□□□ 1.62
RAB40B-201ENST00000269347 SPIRE2Q8WWL2 714 aa25.18■■□□□ 1.62
RAB40B-201ENST00000269347 FOXN3O00409 490 aaPredicted RBP25.17■■□□□ 1.62
RAB40B-201ENST00000269347 PALMO75781 387 aa25.17■■□□□ 1.62
RAB40B-201ENST00000269347 PPIL2Q13356 520 aa25.17■■□□□ 1.62
RAB40B-201ENST00000269347 DRP2Q13474 957 aa25.17■■□□□ 1.62
RAB40B-201ENST00000269347 EMC2Q15006 297 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms