RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 AGBL2Q5U5Z8 902 aa16.5■□□□□ 0.23
DDX56-201ENST00000258772 CHURC1Q8WUH1 139 aa16.5■□□□□ 0.23
DDX56-201ENST00000258772 NAP1L3Q99457 506 aaPredicted RBP16.5■□□□□ 0.23
DDX56-201ENST00000258772 AGPAT1Q99943 283 aa16.5■□□□□ 0.23
DDX56-201ENST00000258772 TEKT3Q9BXF9 490 aa16.5■□□□□ 0.23
DDX56-201ENST00000258772 SLC12A6Q9UHW9 1150 aa16.5■□□□□ 0.23
DDX56-201ENST00000258772 COL2A1P02458 1487 aaPredicted RBP16.5■□□□□ 0.23
DDX56-201ENST00000258772 FAM170AA1A519 330 aa16.5■□□□□ 0.23
DDX56-201ENST00000258772 IPO5O00410 1097 aaKnown RBP16.5■□□□□ 0.23
DDX56-201ENST00000258772 MEFVO15553 781 aaPredicted RBP16.5■□□□□ 0.23
DDX56-201ENST00000258772 LRRN2O75325 713 aa16.5■□□□□ 0.23
DDX56-201ENST00000258772 FAM107AO95990 144 aa16.5■□□□□ 0.23
DDX56-201ENST00000258772 TRIM31Q9BZY9 425 aa16.5■□□□□ 0.23
DDX56-201ENST00000258772 RAB17Q9H0T7 212 aa16.5■□□□□ 0.23
DDX56-201ENST00000258772 BCCIPQ9P287 314 aaKnown RBP eCLIP16.5■□□□□ 0.23
DDX56-201ENST00000258772 E7EVH7 732 aa16.49■□□□□ 0.23
DDX56-201ENST00000258772 BCRP11274 1271 aa16.49■□□□□ 0.23
DDX56-201ENST00000258772 SETQ01105 290 aaPredicted RBP16.49■□□□□ 0.23
DDX56-201ENST00000258772 AOC3Q16853 763 aa16.49■□□□□ 0.23
DDX56-201ENST00000258772 KRT27Q7Z3Y8 459 aa16.49■□□□□ 0.23
DDX56-201ENST00000258772 RHOT2Q8IXI1 618 aa16.49■□□□□ 0.23
DDX56-201ENST00000258772 ATP8B4Q8TF62 1192 aa16.49■□□□□ 0.23
DDX56-201ENST00000258772 ERVK-5Q9HDB9 667 aa16.49■□□□□ 0.23
DDX56-201ENST00000258772 UBE2TQ9NPD8 197 aaPredicted RBP16.49■□□□□ 0.23
DDX56-201ENST00000258772 PPANQ9NQ55 473 aaKnown RBP16.49■□□□□ 0.23
DDX56-201ENST00000258772 EMSYQ7Z589 1322 aa16.49■□□□□ 0.23
DDX56-201ENST00000258772 KIAA0754O94854 1291 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 KRT13P13646 458 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 HADHBP55084 474 aaKnown RBP16.48■□□□□ 0.23
DDX56-201ENST00000258772 DLG4P78352 724 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 DR1Q01658 176 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 ZNF211Q13398 564 aaPredicted RBP16.48■□□□□ 0.23
DDX56-201ENST00000258772 MICALCLQ6ZW33 695 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 ADAT2Q7Z6V5 191 aaKnown RBP16.48■□□□□ 0.23
DDX56-201ENST00000258772 OTUD6BQ8N6M0 293 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 SLC20A1Q8WUM9 679 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 ALG3Q92685 438 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 AKT1S1Q96B36 256 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 ERP44Q9BS26 406 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 NOVA2Q9UNW9 492 aaKnown RBP16.48■□□□□ 0.23
DDX56-201ENST00000258772 ALG6Q9Y672 507 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 GOLGA6L10A0A0M3HER8 536 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 TCP10L2B9ZVM9 353 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 PPFIA2O75334 1257 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 COPB2P35606 906 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 ODF2Q5BJF6 829 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 DUPD1Q68J44 220 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 PADI6Q6TGC4 694 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 INTS8Q75QN2 995 aaKnown RBP16.48■□□□□ 0.23
DDX56-201ENST00000258772 YTHDF3Q7Z739 585 aaKnown RBP16.48■□□□□ 0.23
DDX56-201ENST00000258772 KAT2BQ92831 832 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 FMO2Q99518 471 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 RIT2Q99578 217 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 TXLNGYQ9BZA5 131 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 PCIF1Q9H4Z3 704 aa16.48■□□□□ 0.23
DDX56-201ENST00000258772 QTRT2Q9H974 415 aaKnown RBP16.48■□□□□ 0.23
DDX56-201ENST00000258772 H0YIN7 160 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 K7ENM7 598 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 FTLP02792 175 aaPredicted RBP16.47■□□□□ 0.23
DDX56-201ENST00000258772 VCAM1P19320 739 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 PPP2R2AP63151 447 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 MAEAQ7L5Y9 396 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 GLG1Q92896 1179 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 MXRA8Q9BRK3 442 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 CNOT8Q9UFF9 292 aaKnown RBP16.47■□□□□ 0.23
DDX56-201ENST00000258772 GGA2Q9UJY4 613 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 ATP8A1Q9Y2Q0 1164 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 DDX39AO00148 427 aaKnown RBP16.47■□□□□ 0.23
DDX56-201ENST00000258772 TMOD1P28289 359 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 PPP3CAQ08209 521 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 CETN1Q12798 172 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 CLUL1Q15846 466 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 SPDYCQ5MJ68 293 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 STYK1Q6J9G0 422 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 LDHDQ86WU2 507 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 ARHGEF19Q8IW93 802 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 TMEM206Q9H813 350 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 ZDHHC18Q9NUE0 388 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 TMOD4Q9NZQ9 345 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 LARSQ9P2J5 1176 aaKnown RBP16.47■□□□□ 0.23
DDX56-201ENST00000258772 ZBTB21Q9ULJ3 1066 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 BCS1LQ9Y276 419 aa16.47■□□□□ 0.23
DDX56-201ENST00000258772 GMNCA6NCL1 334 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 FAM187AA6NFU0 413 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 TISP43B9A030 160 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 P4HA2O15460 535 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 VAMP7P51809 220 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 PPARDQ03181 441 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 DHX34Q14147 1143 aaKnown RBP16.46■□□□□ 0.23
DDX56-201ENST00000258772 KRT71Q3SY84 523 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 MSL1Q68DK7 614 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 NEK9Q8TD19 979 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 VTI1AQ96AJ9 217 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 VCPKMTQ9H867 229 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 CTTNBP2NLQ9P2B4 639 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 PLA2G6O60733 806 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 ITGB5P18084 799 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 MAGOHP61326 146 aaKnown RBP16.46■□□□□ 0.23
DDX56-201ENST00000258772 TCEAL1Q15170 157 aa16.46■□□□□ 0.23
DDX56-201ENST00000258772 ZYXQ15942 572 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms