RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 CA14Q9ULX7 337 aa15.53■□□□□ 0.08
DDX39A-201ENST00000242776 PIN4Q9Y237 131 aaKnown RBP15.53■□□□□ 0.08
DDX39A-201ENST00000242776 USTQ9Y2C2 406 aa15.53■□□□□ 0.08
DDX39A-201ENST00000242776 B4GALT3O60512 393 aa15.52■□□□□ 0.08
DDX39A-201ENST00000242776 CYP3A4P08684 503 aa15.52■□□□□ 0.08
DDX39A-201ENST00000242776 GBP2P32456 591 aaPredicted RBP15.52■□□□□ 0.08
DDX39A-201ENST00000242776 RBM25P49756 843 aaKnown RBP15.52■□□□□ 0.08
DDX39A-201ENST00000242776 SETQ01105 290 aaPredicted RBP15.52■□□□□ 0.08
DDX39A-201ENST00000242776 PTPN14Q15678 1187 aa15.52■□□□□ 0.08
DDX39A-201ENST00000242776 TSGA10IPQ3SY00 556 aa15.52■□□□□ 0.08
DDX39A-201ENST00000242776 NOMO2Q5JPE7 1267 aa15.52■□□□□ 0.08
DDX39A-201ENST00000242776 GLB1LQ6UWU2 654 aa15.52■□□□□ 0.08
DDX39A-201ENST00000242776 OTOP3Q7RTS5 596 aa15.52■□□□□ 0.08
DDX39A-201ENST00000242776 GPR149Q86SP6 731 aa15.52■□□□□ 0.08
DDX39A-201ENST00000242776 ZNF280BQ86YH2 543 aa15.52■□□□□ 0.08
DDX39A-201ENST00000242776 KCNB2Q92953 911 aa15.52■□□□□ 0.08
DDX39A-201ENST00000242776 TBC1D32Q96NH3 1257 aa15.52■□□□□ 0.08
DDX39A-201ENST00000242776 KLHL5Q96PQ7 755 aa15.52■□□□□ 0.08
DDX39A-201ENST00000242776 GCOM2Q9BZD3 368 aaPredicted RBP15.52■□□□□ 0.08
DDX39A-201ENST00000242776 DISC1Q9NRI5 854 aa15.52■□□□□ 0.08
DDX39A-201ENST00000242776 DUSP12Q9UNI6 340 aa15.52■□□□□ 0.08
DDX39A-201ENST00000242776 WDR87Q6ZQQ6 2873 aa15.52■□□□□ 0.07
DDX39A-201ENST00000242776 WDR64B1ANS9 1081 aa15.52■□□□□ 0.07
DDX39A-201ENST00000242776 hCG_1984214I3L0E3 225 aa15.52■□□□□ 0.07
DDX39A-201ENST00000242776 KSR1Q8IVT5 923 aa15.52■□□□□ 0.07
DDX39A-201ENST00000242776 ZNF713Q8N859 430 aaPredicted RBP15.52■□□□□ 0.07
DDX39A-201ENST00000242776 CRYGNQ8WXF5 182 aa15.52■□□□□ 0.07
DDX39A-201ENST00000242776 GLT8D2Q9H1C3 349 aa15.52■□□□□ 0.07
DDX39A-201ENST00000242776 FAM217BQ9NTX9 383 aaPredicted RBP15.52■□□□□ 0.07
DDX39A-201ENST00000242776 SNX14Q9Y5W7 946 aa15.52■□□□□ 0.07
DDX39A-201ENST00000242776 MED19A0JLT2 244 aaPredicted RBP15.51■□□□□ 0.07
DDX39A-201ENST00000242776 CNPP09543 421 aaKnown RBP15.51■□□□□ 0.07
DDX39A-201ENST00000242776 PSMA5P28066 241 aa15.51■□□□□ 0.07
DDX39A-201ENST00000242776 ADD1P35611 737 aaKnown RBP15.51■□□□□ 0.07
DDX39A-201ENST00000242776 CLCN4P51793 760 aa15.51■□□□□ 0.07
DDX39A-201ENST00000242776 POLGP54098 1239 aaPredicted RBP15.51■□□□□ 0.07
DDX39A-201ENST00000242776 GIT2Q14161 759 aa15.51■□□□□ 0.07
DDX39A-201ENST00000242776 PFKFB3Q16875 520 aaPredicted RBP15.51■□□□□ 0.07
DDX39A-201ENST00000242776 PPFIBP1Q86W92 1011 aa15.51■□□□□ 0.07
DDX39A-201ENST00000242776 RHPN2Q8IUC4 686 aa15.51■□□□□ 0.07
DDX39A-201ENST00000242776 REXO1Q8N1G1 1221 aaKnown RBP15.51■□□□□ 0.07
DDX39A-201ENST00000242776 RMDN1Q96DB5 314 aa15.51■□□□□ 0.07
DDX39A-201ENST00000242776 NLRP4Q96MN2 994 aa15.51■□□□□ 0.07
DDX39A-201ENST00000242776 RTP3Q9BQQ7 232 aa15.51■□□□□ 0.07
DDX39A-201ENST00000242776 EMILIN2Q9BXX0 1053 aa15.51■□□□□ 0.07
DDX39A-201ENST00000242776 UNC45AQ9H3U1 944 aa15.51■□□□□ 0.07
DDX39A-201ENST00000242776 C6orf50Q9HD87 102 aa15.51■□□□□ 0.07
DDX39A-201ENST00000242776 FAM105AQ9NUU6 356 aa15.51■□□□□ 0.07
DDX39A-201ENST00000242776 EP300Q09472 2414 aaPredicted RBP15.51■□□□□ 0.07
DDX39A-201ENST00000242776 KRBA1A5PL33 1030 aa15.5■□□□□ 0.07
DDX39A-201ENST00000242776 MSH4O15457 936 aa15.5■□□□□ 0.07
DDX39A-201ENST00000242776 GAS7O60861 476 aa15.5■□□□□ 0.07
DDX39A-201ENST00000242776 N4BP1O75113 896 aaKnown RBP15.5■□□□□ 0.07
DDX39A-201ENST00000242776 OFD1O75665 1012 aa15.5■□□□□ 0.07
DDX39A-201ENST00000242776 DDHD2O94830 711 aa15.5■□□□□ 0.07
DDX39A-201ENST00000242776 SPATA31D3P0C874 917 aa15.5■□□□□ 0.07
DDX39A-201ENST00000242776 LETM2Q2VYF4 491 aa15.5■□□□□ 0.07
DDX39A-201ENST00000242776 SPATA31D4Q6ZUB0 917 aa15.5■□□□□ 0.07
DDX39A-201ENST00000242776 CATSPER4Q7RTX7 472 aa15.5■□□□□ 0.07
DDX39A-201ENST00000242776 MAN1C1Q9NR34 630 aa15.5■□□□□ 0.07
DDX39A-201ENST00000242776 IRAK3Q9Y616 596 aa15.5■□□□□ 0.07
DDX39A-201ENST00000242776 DMXL1Q9Y485 3027 aa15.49■□□□□ 0.07
DDX39A-201ENST00000242776 POMCP01189 267 aa15.49■□□□□ 0.07
DDX39A-201ENST00000242776 DCNP07585 359 aaKnown RBP15.49■□□□□ 0.07
DDX39A-201ENST00000242776 HMGB1P09429 215 aaKnown RBP15.49■□□□□ 0.07
DDX39A-201ENST00000242776 CPA1P15085 419 aa15.49■□□□□ 0.07
DDX39A-201ENST00000242776 SFPQP23246 707 aaKnown RBP eCLIP15.49■□□□□ 0.07
DDX39A-201ENST00000242776 AFF1P51825 1210 aaKnown RBP15.49■□□□□ 0.07
DDX39A-201ENST00000242776 AK2P54819 239 aa15.49■□□□□ 0.07
DDX39A-201ENST00000242776 ADCK5Q3MIX3 580 aa15.49■□□□□ 0.07
DDX39A-201ENST00000242776 RASEFQ8IZ41 740 aa15.49■□□□□ 0.07
DDX39A-201ENST00000242776 LENG9Q96B70 501 aa15.49■□□□□ 0.07
DDX39A-201ENST00000242776 FAM193BQ96PV7 902 aaPredicted RBP15.49■□□□□ 0.07
DDX39A-201ENST00000242776 CHST12Q9NRB3 414 aa15.49■□□□□ 0.07
DDX39A-201ENST00000242776 SUCLA2Q9P2R7 463 aaPredicted RBP15.49■□□□□ 0.07
DDX39A-201ENST00000242776 CCDC195A0A1B0GUA6 201 aa15.48■□□□□ 0.07
DDX39A-201ENST00000242776 DDX11L8A8MPP1 907 aa15.48■□□□□ 0.07
DDX39A-201ENST00000242776 LMNAP02545 664 aaKnown RBP15.48■□□□□ 0.07
DDX39A-201ENST00000242776 FGD1P98174 961 aa15.48■□□□□ 0.07
DDX39A-201ENST00000242776 EXOSC10Q01780 885 aaKnown RBP15.48■□□□□ 0.07
DDX39A-201ENST00000242776 LRCH2Q5VUJ6 765 aa15.48■□□□□ 0.07
DDX39A-201ENST00000242776 DHX32Q7L7V1 743 aaKnown RBP15.48■□□□□ 0.07
DDX39A-201ENST00000242776 TAS1R1Q7RTX1 841 aa15.48■□□□□ 0.07
DDX39A-201ENST00000242776 DGLUCYQ7Z3D6 616 aa15.48■□□□□ 0.07
DDX39A-201ENST00000242776 URGCPQ8TCY9 931 aa15.48■□□□□ 0.07
DDX39A-201ENST00000242776 PHKBQ93100 1093 aa15.48■□□□□ 0.07
DDX39A-201ENST00000242776 JAKMIP1Q96N16 626 aaKnown RBP15.48■□□□□ 0.07
DDX39A-201ENST00000242776 TEKT3Q9BXF9 490 aa15.48■□□□□ 0.07
DDX39A-201ENST00000242776 TBC1D17Q9HA65 648 aa15.48■□□□□ 0.07
DDX39A-201ENST00000242776 MRPL17Q9NRX2 175 aaKnown RBP15.48■□□□□ 0.07
DDX39A-201ENST00000242776 FAN1Q9Y2M0 1017 aa15.48■□□□□ 0.07
DDX39A-201ENST00000242776 PRG3Q9Y2Y8 225 aaPredicted RBP15.48■□□□□ 0.07
DDX39A-201ENST00000242776 DOCK8Q8NF50 2099 aa15.48■□□□□ 0.07
DDX39A-201ENST00000242776 RFPL2O75678 378 aa15.47■□□□□ 0.07
DDX39A-201ENST00000242776 DNM2P50570 870 aa15.47■□□□□ 0.07
DDX39A-201ENST00000242776 TARBP2Q15633 366 aaKnown RBP15.47■□□□□ 0.07
DDX39A-201ENST00000242776 BLOC1S2Q6QNY1 142 aa15.47■□□□□ 0.07
DDX39A-201ENST00000242776 MIER3Q7Z3K6 550 aa15.47■□□□□ 0.07
DDX39A-201ENST00000242776 GLYCTKQ8IVS8 523 aa15.47■□□□□ 0.07
DDX39A-201ENST00000242776 DCLK2Q8N568 766 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms