RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Alg1Q921Q3 482 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Glrx3Q9CQM9 337 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 1700013H16RikQ9DAC5 291 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Erap1Q9EQH2 930 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Mrc1Q61830 1456 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Folh1O35409 752 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Tnni2P13412 182 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 PrkacbP68181 351 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Fam117bQ3U3E2 584 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Dennd2cQ6P9P8 914 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Dhx40Q6PE54 779 aaKnown RBP7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Smg5Q6ZPY2 1017 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Tas2r124Q7M718 309 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Clec4a1Q80UI7 245 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Trim16Q99PP9 556 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Clec4aQ9QZ15 238 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Rnf4Q9QZS2 194 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Usp34Q6ZQ93 3582 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Plekhg4A0A1L1SU27 1217 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 JrklB2RRL2 523 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Gm21897J3KMP5 500 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Gm21750L7N228 499 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Clk4O35493 481 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 ApoeP08226 311 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Gsta2P10648 222 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 MarcksP26645 309 aaKnown RBP7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Calb2Q08331 271 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 MamstrQ0ZCJ7 421 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 6430531B16RikQ3V2J1 307 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 CcnjlQ5SRT8 387 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Rapgefl1Q68EF8 662 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Znf280dQ68FE8 974 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Impg2Q80XH2 1243 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Tti2Q8BGV4 512 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Rnf38Q8BI21 518 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Phf23Q8BSN5 401 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Usp20Q8C6M1 916 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Brd8Q8R3B7 951 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Lrrc49Q91YK0 686 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Ska1Q9CPV1 254 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 RarsQ9D0I9 660 aaKnown RBP7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 Cd2apQ9JLQ0 637 aa7.66□□□□□ -1.18
Chm-202ENSMUST00000113388 4921501E09RikA0A0R4J054 908 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Zfp839E9PUU5 921 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 PpargP37238 505 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Stat1P42225 749 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Msh2P43247 935 aaKnown RBP7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Ccpg1Q640L3 753 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Polr2eQ80UW8 210 aaKnown RBP7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Tsen34Q8BMZ5 316 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Armc6Q8BNU0 468 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Chchd6Q91VN4 273 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Cabp7Q91ZM8 215 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Tgs1Q923W1 853 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Ccdc77Q9CZH8 489 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Ifrd2Q9D8U0 441 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 1700123K08RikQ9D991 295 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Plod1Q9R0E2 728 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Sipa1l3G3X9J0 1776 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Zfp780bE9Q2S6 806 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Ppef1O35655 650 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Rufy4Q3TYX8 563 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Lins1Q3U1D0 764 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Fam129aQ3UW53 926 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Ehd2Q8BH64 543 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Leng8Q8CBY3 785 aaKnown RBP7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Tceanc2Q8R2M0 207 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 MgarpQ8VI64 283 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 St13Q99L47 371 aaKnown RBP7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Map3k20Q9ESL4 802 aaKnown RBP7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Nup50Q9JIH2 466 aaKnown RBP7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 Vstm4T1NXB5 319 aa7.65□□□□□ -1.18
Chm-202ENSMUST00000113388 B020011L13RikA0A087WQI7 412 aa7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 Gm4871D3Z0W7 314 aa7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 Rc3h2P0C090 1187 aaKnown RBP7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 Tcp1P11983 556 aaKnown RBP7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 D1Pas1P16381 660 aa7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 IppP28575 584 aa7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 Sptlc2P97363 560 aaKnown RBP7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 Kcnd1Q03719 651 aa7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 Nek10Q3UGM2 1111 aa7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 Stip1Q60864 543 aaKnown RBP7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 Insm1Q63ZV0 521 aa7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 Ifit3Q64345 403 aa7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 Psd2Q6P1I6 770 aa7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 Arhgef18Q6P9R4 1021 aa7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 TwistnbQ78WZ7 330 aaKnown RBP7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 Fam160b2Q80YR2 744 aa7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 Hspa13Q8BM72 471 aa7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 Fam217aQ9D9W6 419 aa7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 Leng1Q9DB98 261 aa7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 NvlQ9DBY8 855 aaKnown RBP7.65□□□□□ -1.19
Chm-202ENSMUST00000113388 Ces1hD3Z298 562 aa7.64□□□□□ -1.19
Chm-202ENSMUST00000113388 Gm10639E9Q6L7 222 aa7.64□□□□□ -1.19
Chm-202ENSMUST00000113388 Mmp8O70138 465 aa7.64□□□□□ -1.19
Chm-202ENSMUST00000113388 Xrcc5P27641 732 aa7.64□□□□□ -1.19
Chm-202ENSMUST00000113388 Gja8P28236 440 aa7.64□□□□□ -1.19
Chm-202ENSMUST00000113388 Plin2P43883 425 aa7.64□□□□□ -1.19
Chm-202ENSMUST00000113388 Mark2Q05512 776 aa7.64□□□□□ -1.19
Chm-202ENSMUST00000113388 LyarQ08288 388 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 55.8 ms