RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W OKP1P53298 406 aa3.04□□□□□ -1.92
TRM112YNR046W SUR7P54003 302 aa3.04□□□□□ -1.92
TRM112YNR046W YMR111CQ04461 462 aaPredicted RBP3.04□□□□□ -1.92
TRM112YNR046W YLR177WQ06251 628 aa3.04□□□□□ -1.92
TRM112YNR046W RBD2Q12270 262 aa3.04□□□□□ -1.92
TRM112YNR046W UNG1P12887 359 aa3.03□□□□□ -1.92
TRM112YNR046W ICL1P28240 557 aaPredicted RBP3.03□□□□□ -1.92
TRM112YNR046W PMT2P31382 759 aa3.03□□□□□ -1.92
TRM112YNR046W ZRT1P32804 376 aa3.03□□□□□ -1.92
TRM112YNR046W KTI12P34253 313 aaKnown RBP3.03□□□□□ -1.92
TRM112YNR046W YBR241CP38142 488 aa3.03□□□□□ -1.92
TRM112YNR046W GPI18P38211 433 aa3.03□□□□□ -1.92
TRM112YNR046W BMT2P38278 337 aa3.03□□□□□ -1.92
TRM112YNR046W WSC4P38739 605 aa3.03□□□□□ -1.92
TRM112YNR046W IGD1P43598 195 aa3.03□□□□□ -1.92
TRM112YNR046W KEL2P50090 882 aa3.03□□□□□ -1.92
TRM112YNR046W YNL260CP53846 198 aa3.03□□□□□ -1.92
TRM112YNR046W ENT5Q03769 411 aaKnown RBP3.03□□□□□ -1.92
TRM112YNR046W DTD1Q07648 150 aaKnown RBP3.03□□□□□ -1.92
TRM112YNR046W LDB17Q12342 491 aa3.03□□□□□ -1.92
TRM112YNR046W REP1P03871 373 aa3.02□□□□□ -1.93
TRM112YNR046W CMK2P22517 447 aa3.02□□□□□ -1.93
TRM112YNR046W MEK1P24719 497 aaPredicted RBP3.02□□□□□ -1.93
TRM112YNR046W YKL070WP36087 169 aa3.02□□□□□ -1.93
TRM112YNR046W SWD2P36104 329 aaPredicted RBP3.02□□□□□ -1.93
TRM112YNR046W GCD14P46959 383 aaPredicted RBP3.02□□□□□ -1.93
TRM112YNR046W MPP10P47083 593 aaKnown RBP3.02□□□□□ -1.93
TRM112YNR046W EMC2P47133 292 aaKnown RBP3.02□□□□□ -1.93
TRM112YNR046W MND1P53102 219 aa3.02□□□□□ -1.93
TRM112YNR046W RPN14P53196 417 aa3.02□□□□□ -1.93
TRM112YNR046W RNH201P53942 307 aa3.02□□□□□ -1.93
TRM112YNR046W YPL080CQ02826 108 aa3.02□□□□□ -1.93
TRM112YNR046W MRX9Q07349 420 aaKnown RBP3.02□□□□□ -1.93
TRM112YNR046W PBP4Q07362 185 aaKnown RBP3.02□□□□□ -1.93
TRM112YNR046W YLR012CQ07927 99 aa3.02□□□□□ -1.93
TRM112YNR046W RDL2Q08742 149 aaKnown RBP3.02□□□□□ -1.93
TRM112YNR046W TAF10Q12030 206 aa3.02□□□□□ -1.93
TRM112YNR046W RRP36Q12481 300 aaPredicted RBP3.02□□□□□ -1.93
TRM112YNR046W PRM4Q12498 284 aa3.02□□□□□ -1.93
TRM112YNR046W RPL21BQ12672 160 aaKnown RBP3.02□□□□□ -1.93
TRM112YNR046W FOL3Q12676 427 aaPredicted RBP3.02□□□□□ -1.93
TRM112YNR046W IZH4Q99393 312 aa3.02□□□□□ -1.93
TRM112YNR046W SSA3P09435 649 aaKnown RBP3.01□□□□□ -1.93
TRM112YNR046W CSM1P25651 190 aa3.01□□□□□ -1.93
TRM112YNR046W IES6P32617 166 aa3.01□□□□□ -1.93
TRM112YNR046W ECT1P33412 323 aa3.01□□□□□ -1.93
TRM112YNR046W TDA11P38854 504 aa3.01□□□□□ -1.93
TRM112YNR046W PEX22P39718 180 aa3.01□□□□□ -1.93
TRM112YNR046W DSE1P40077 573 aa3.01□□□□□ -1.93
TRM112YNR046W PRE5P40302 234 aaKnown RBP3.01□□□□□ -1.93
TRM112YNR046W PMT4P46971 762 aa3.01□□□□□ -1.93
TRM112YNR046W YGL185CP53100 379 aa3.01□□□□□ -1.93
TRM112YNR046W CDH1P53197 566 aa3.01□□□□□ -1.93
TRM112YNR046W YGR015CP53208 328 aa3.01□□□□□ -1.93
TRM112YNR046W VHT1P53241 593 aa3.01□□□□□ -1.93
TRM112YNR046W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
TRM112YNR046W YPQ1Q12010 308 aa3.01□□□□□ -1.93
TRM112YNR046W RPS14AP06367 137 aaKnown RBP3□□□□□ -1.93
TRM112YNR046W ASP3-2P0CX77 362 aa3□□□□□ -1.93
TRM112YNR046W ASP3-3P0CX78 362 aa3□□□□□ -1.93
TRM112YNR046W ASP3-4P0CX79 362 aa3□□□□□ -1.93
TRM112YNR046W ASP3-1P0CZ17 362 aa3□□□□□ -1.93
TRM112YNR046W ERD1P16151 362 aa3□□□□□ -1.93
TRM112YNR046W GPI12P23797 304 aa3□□□□□ -1.93
TRM112YNR046W DTR1P38125 572 aa3□□□□□ -1.93
TRM112YNR046W RPS14BP39516 138 aaKnown RBP3□□□□□ -1.93
TRM112YNR046W HEM14P40012 539 aa3□□□□□ -1.93
TRM112YNR046W STB1P42845 420 aa3□□□□□ -1.93
TRM112YNR046W YFL040WP43562 540 aa3□□□□□ -1.93
TRM112YNR046W YJR054WP47114 497 aa3□□□□□ -1.93
TRM112YNR046W SEH1P53011 349 aaKnown RBP3□□□□□ -1.93
TRM112YNR046W YGL039WP53183 348 aaKnown RBP3□□□□□ -1.93
TRM112YNR046W YGR266WP53326 701 aa3□□□□□ -1.93
TRM112YNR046W BIO4P53630 237 aa3□□□□□ -1.93
TRM112YNR046W YNL050CP53952 270 aa3□□□□□ -1.93
TRM112YNR046W KTR6P54070 446 aa3□□□□□ -1.93
TRM112YNR046W YDR115WQ04598 105 aa3□□□□□ -1.93
TRM112YNR046W MHR1Q06630 226 aa3□□□□□ -1.93
TRM112YNR046W RPN8Q08723 338 aaKnown RBP3□□□□□ -1.93
TRM112YNR046W UTP23Q12339 254 aaKnown RBP3□□□□□ -1.93
TRM112YNR046W ERP3Q12403 225 aa3□□□□□ -1.93
TRM112YNR046W MHP1P43638 1398 aa3□□□□□ -1.93
TRM112YNR046W COX4P04037 155 aa2.99□□□□□ -1.93
TRM112YNR046W REV1P12689 985 aa2.99□□□□□ -1.93
TRM112YNR046W SHE1P38200 338 aa2.99□□□□□ -1.93
TRM112YNR046W SHE3P38272 425 aaKnown RBP2.99□□□□□ -1.93
TRM112YNR046W HIS2P38635 335 aa2.99□□□□□ -1.93
TRM112YNR046W PET100P38958 111 aa2.99□□□□□ -1.93
TRM112YNR046W BIO3P50277 480 aa2.99□□□□□ -1.93
TRM112YNR046W NRM1P53718 249 aa2.99□□□□□ -1.93
TRM112YNR046W YLR152CP54072 576 aa2.99□□□□□ -1.93
TRM112YNR046W SED5Q01590 340 aa2.99□□□□□ -1.93
TRM112YNR046W SNX41Q04053 625 aa2.99□□□□□ -1.93
TRM112YNR046W FAR10Q06001 478 aa2.99□□□□□ -1.93
TRM112YNR046W BER1Q06688 274 aaKnown RBP2.99□□□□□ -1.93
TRM112YNR046W TMC1Q08422 150 aaPredicted RBP2.99□□□□□ -1.93
TRM112YNR046W SAL1D6W196 494 aa2.98□□□□□ -1.93
TRM112YNR046W LDB16P25587 256 aa2.98□□□□□ -1.93
TRM112YNR046W SPR1P32603 445 aa2.98□□□□□ -1.93
TRM112YNR046W PDC2P32896 925 aa2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 178.2 ms