RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W CHL4P38907 458 aa2.28□□□□□ -2.05
SHS1YDL225W AIM20P40451 204 aa2.28□□□□□ -2.05
SHS1YDL225W ABZ2Q03266 374 aa2.28□□□□□ -2.05
SHS1YDL225W ECM11Q04110 302 aa2.28□□□□□ -2.05
SHS1YDL225W PIN3Q06449 215 aa2.28□□□□□ -2.05
SHS1YDL225W RTC5Q12108 567 aaKnown RBP2.28□□□□□ -2.05
SHS1YDL225W APC2Q12440 853 aa2.28□□□□□ -2.05
SHS1YDL225W YBL111CQ3E7Y5 667 aa2.28□□□□□ -2.05
SHS1YDL225W BGL2P15703 313 aaKnown RBP2.27□□□□□ -2.05
SHS1YDL225W ITR2P30606 609 aa2.27□□□□□ -2.05
SHS1YDL225W YFL012WP43580 148 aa2.27□□□□□ -2.05
SHS1YDL225W YFR018CP43599 363 aa2.27□□□□□ -2.05
SHS1YDL225W FLC3P53121 802 aa2.27□□□□□ -2.05
SHS1YDL225W YGR168CP53293 376 aa2.27□□□□□ -2.05
SHS1YDL225W RVB1Q03940 463 aaKnown RBP2.27□□□□□ -2.05
SHS1YDL225W VPS20Q04272 221 aa2.27□□□□□ -2.05
SHS1YDL225W TIR4Q12218 487 aaPredicted RBP2.27□□□□□ -2.05
SHS1YDL225W YOL085CQ99345 113 aa2.27□□□□□ -2.05
SHS1YDL225W REP1P03871 373 aa2.26□□□□□ -2.05
SHS1YDL225W CDC37P06101 506 aaKnown RBP2.26□□□□□ -2.05
SHS1YDL225W RBK1P25332 333 aa2.26□□□□□ -2.05
SHS1YDL225W YPS1P32329 569 aa2.26□□□□□ -2.05
SHS1YDL225W ECM34P38728 170 aa2.26□□□□□ -2.05
SHS1YDL225W YDR089WP38966 869 aa2.26□□□□□ -2.05
SHS1YDL225W RRT13P40042 185 aa2.26□□□□□ -2.05
SHS1YDL225W OSW5P40219 148 aa2.26□□□□□ -2.05
SHS1YDL225W NRM1P53718 249 aa2.26□□□□□ -2.05
SHS1YDL225W FAR10Q06001 478 aa2.26□□□□□ -2.05
SHS1YDL225W RAX2Q12465 1220 aa2.26□□□□□ -2.05
SHS1YDL225W STE2D6VTK4 431 aa2.25□□□□□ -2.05
SHS1YDL225W VPS63O13549 108 aa2.25□□□□□ -2.05
SHS1YDL225W ACB1P31787 87 aa2.25□□□□□ -2.05
SHS1YDL225W TAE1P38340 232 aa2.25□□□□□ -2.05
SHS1YDL225W GGC1P38988 300 aa2.25□□□□□ -2.05
SHS1YDL225W END3P39013 349 aa2.25□□□□□ -2.05
SHS1YDL225W SSO2P39926 295 aa2.25□□□□□ -2.05
SHS1YDL225W YER184CP39961 794 aa2.25□□□□□ -2.05
SHS1YDL225W CAB5Q03941 241 aa2.25□□□□□ -2.05
SHS1YDL225W API2Q04413 109 aa2.25□□□□□ -2.05
SHS1YDL225W MMT2Q08970 484 aa2.25□□□□□ -2.05
SHS1YDL225W CTA1P15202 515 aa2.25□□□□□ -2.05
SHS1YDL225W MEI5P32489 222 aa2.25□□□□□ -2.05
SHS1YDL225W KTI12P34253 313 aaKnown RBP2.25□□□□□ -2.05
SHS1YDL225W SWC5P38326 303 aa2.25□□□□□ -2.05
SHS1YDL225W UTP25P40498 721 aaKnown RBP2.25□□□□□ -2.05
SHS1YDL225W YLR297WQ05899 129 aa2.25□□□□□ -2.05
SHS1YDL225W YOL029CQ08187 201 aa2.25□□□□□ -2.05
SHS1YDL225W PAA1Q12447 191 aaKnown RBP2.25□□□□□ -2.05
SHS1YDL225W YAL067W-AQ8TGK6 75 aa2.25□□□□□ -2.05
SHS1YDL225W MHP1P43638 1398 aa2.24□□□□□ -2.05
SHS1YDL225W CBP2P03874 630 aaPredicted RBP2.24□□□□□ -2.05
SHS1YDL225W RPS19AP07280 144 aaKnown RBP2.24□□□□□ -2.05
SHS1YDL225W RPS19BP07281 144 aaPredicted RBP2.24□□□□□ -2.05
SHS1YDL225W SPS100P13130 326 aa2.24□□□□□ -2.05
SHS1YDL225W PET18P25362 215 aa2.24□□□□□ -2.05
SHS1YDL225W PES4P39684 611 aa2.24□□□□□ -2.05
SHS1YDL225W YGR067CP53243 804 aa2.24□□□□□ -2.05
SHS1YDL225W TPC1P53257 314 aa2.24□□□□□ -2.05
SHS1YDL225W SED5Q01590 340 aa2.24□□□□□ -2.05
SHS1YDL225W RPN8Q08723 338 aaKnown RBP2.24□□□□□ -2.05
SHS1YDL225W RDL2Q08742 149 aaKnown RBP2.24□□□□□ -2.05
SHS1YDL225W PRM4Q12498 284 aa2.24□□□□□ -2.05
SHS1YDL225W BUD2P33314 1104 aa2.23□□□□□ -2.05
SHS1YDL225W CBF5P33322 483 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
SHS1YDL225W DBP7P36120 742 aaKnown RBP2.23□□□□□ -2.05
SHS1YDL225W EFM1P38732 585 aa2.23□□□□□ -2.05
SHS1YDL225W FHL1P39521 936 aa2.23□□□□□ -2.05
SHS1YDL225W MRX9Q07349 420 aaKnown RBP2.23□□□□□ -2.05
SHS1YDL225W SLF1Q12034 447 aaKnown RBP2.23□□□□□ -2.05
SHS1YDL225W MDY2Q12285 212 aa2.23□□□□□ -2.05
SHS1YDL225W TIP20P33891 701 aa2.22□□□□□ -2.05
SHS1YDL225W YKL162CP36052 402 aa2.22□□□□□ -2.05
SHS1YDL225W DTR1P38125 572 aa2.22□□□□□ -2.05
SHS1YDL225W FET3P38993 636 aa2.22□□□□□ -2.05
SHS1YDL225W HIT1P46973 164 aa2.22□□□□□ -2.05
SHS1YDL225W COQ5P49017 307 aa2.22□□□□□ -2.05
SHS1YDL225W RIB4P50861 169 aaPredicted RBP2.22□□□□□ -2.05
SHS1YDL225W IRC4Q03036 179 aa2.22□□□□□ -2.05
SHS1YDL225W CUR1Q06469 252 aa2.22□□□□□ -2.05
SHS1YDL225W YLR012CQ07927 99 aa2.22□□□□□ -2.05
SHS1YDL225W YDR018CQ12185 396 aa2.22□□□□□ -2.05
SHS1YDL225W RCK1P38622 512 aa2.22□□□□□ -2.05
SHS1YDL225W INA22P40576 216 aa2.22□□□□□ -2.05
SHS1YDL225W YFL040WP43562 540 aa2.22□□□□□ -2.05
SHS1YDL225W PMT4P46971 762 aa2.22□□□□□ -2.05
SHS1YDL225W DBP6P53734 629 aaKnown RBP2.22□□□□□ -2.05
SHS1YDL225W YPL080CQ02826 108 aa2.22□□□□□ -2.05
SHS1YDL225W RNY1Q02933 434 aaKnown RBP2.22□□□□□ -2.05
SHS1YDL225W INP1Q03694 420 aa2.22□□□□□ -2.05
SHS1YDL225W YMR244WQ04018 355 aa2.22□□□□□ -2.05
SHS1YDL225W SAM4Q08985 325 aaKnown RBP2.22□□□□□ -2.05
SHS1YDL225W AUS1Q08409 1394 aa2.21□□□□□ -2.06
SHS1YDL225W GCD2P12754 651 aaPredicted RBP2.21□□□□□ -2.06
SHS1YDL225W MSS116P15424 664 aaKnown RBP2.21□□□□□ -2.06
SHS1YDL225W ZIP1P31111 875 aa2.21□□□□□ -2.06
SHS1YDL225W RAD23P32628 398 aaKnown RBP2.21□□□□□ -2.06
SHS1YDL225W MNN9P39107 395 aaKnown RBP2.21□□□□□ -2.06
SHS1YDL225W FMP48P53233 369 aa2.21□□□□□ -2.06
SHS1YDL225W YMR111CQ04461 462 aaPredicted RBP2.21□□□□□ -2.06
SHS1YDL225W PBP4Q07362 185 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms