RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 SERPINB3P29508 390 aa12.71□□□□□ -0.37
LINC00538-201ENST00000626109 MAPK4P31152 587 aa12.71□□□□□ -0.37
LINC00538-201ENST00000626109 NSMFQ6X4W1 530 aa12.71□□□□□ -0.37
LINC00538-201ENST00000626109 OTUD6AQ7L8S5 288 aa12.71□□□□□ -0.37
LINC00538-201ENST00000626109 DNAJC5GQ8N7S2 189 aa12.71□□□□□ -0.37
LINC00538-201ENST00000626109 CLEC4DQ8WXI8 215 aa12.71□□□□□ -0.37
LINC00538-201ENST00000626109 SHISA4Q96DD7 197 aa12.71□□□□□ -0.37
LINC00538-201ENST00000626109 AP1M1Q9BXS5 423 aa12.71□□□□□ -0.37
LINC00538-201ENST00000626109 PORCNQ9H237 461 aa12.71□□□□□ -0.37
LINC00538-201ENST00000626109 EFCC1Q9HA90 598 aa12.71□□□□□ -0.37
LINC00538-201ENST00000626109 UTP6Q9NYH9 597 aaKnown RBP12.71□□□□□ -0.37
LINC00538-201ENST00000626109 PCDHA4Q9UN74 947 aa12.71□□□□□ -0.37
LINC00538-201ENST00000626109 RRP15Q9Y3B9 282 aaKnown RBP12.71□□□□□ -0.37
LINC00538-201ENST00000626109 GCOM1H8Y6P7 765 aaPredicted RBP12.7□□□□□ -0.38
LINC00538-201ENST00000626109 ARHGAP6O43182 974 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 AKAP10O43572 662 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 CFBP00751 764 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 POLR2MP0CAP2 368 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 ATP1A3P13637 1013 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 KRT2P35908 639 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 DAGLBQ8NCG7 672 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 HVCN1Q96D96 273 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 R3HDMLQ9H3Y0 253 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 L2HGDHQ9H9P8 463 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 SRA1Q9HD15 236 aaKnown RBP12.7□□□□□ -0.38
LINC00538-201ENST00000626109 CYLDQ9NQC7 956 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 TMEM110-MUSTN1A8MSY1 372 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 OPLAHO14841 1288 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 POLR2DO15514 142 aaKnown RBP12.7□□□□□ -0.38
LINC00538-201ENST00000626109 IDEP14735 1019 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 ETF1P62495 437 aaKnown RBP12.7□□□□□ -0.38
LINC00538-201ENST00000626109 DMTNQ08495 405 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 PPP2R5CQ13362 524 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 UNC5DQ6UXZ4 953 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 SYT10Q6XYQ8 523 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 RNF207Q6ZRF8 634 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 BLIDQ8IZY5 108 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 REXO1Q8N1G1 1221 aaKnown RBP12.7□□□□□ -0.38
LINC00538-201ENST00000626109 ANKRD35Q8N283 1001 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 EPS8L1Q8TE68 723 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 TIFAQ96CG3 184 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 HSD3B7Q9H2F3 369 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 CEP83Q9Y592 693 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 DNMT3AQ9Y6K1 912 aaPredicted RBP12.7□□□□□ -0.38
LINC00538-201ENST00000626109 PFASO15067 1338 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 PHLPP2Q6ZVD8 1323 aa12.7□□□□□ -0.38
LINC00538-201ENST00000626109 MOXD2PA6NHM9 499 aa12.69□□□□□ -0.38
LINC00538-201ENST00000626109 TPM1P09493 284 aa12.69□□□□□ -0.38
LINC00538-201ENST00000626109 FCER1AP12319 257 aa12.69□□□□□ -0.38
LINC00538-201ENST00000626109 RPL17P18621 184 aaKnown RBP12.69□□□□□ -0.38
LINC00538-201ENST00000626109 TOB1P50616 345 aaPredicted RBP12.69□□□□□ -0.38
LINC00538-201ENST00000626109 KIF22Q14807 665 aa12.69□□□□□ -0.38
LINC00538-201ENST00000626109 UBE2SQ16763 222 aa12.69□□□□□ -0.38
LINC00538-201ENST00000626109 MCTP2Q6DN12 878 aa12.69□□□□□ -0.38
LINC00538-201ENST00000626109 DDX12PQ92771 950 aa12.69□□□□□ -0.38
LINC00538-201ENST00000626109 N4BP2L2Q92802 583 aaPredicted RBP12.69□□□□□ -0.38
LINC00538-201ENST00000626109 MMP19Q99542 508 aa12.69□□□□□ -0.38
LINC00538-201ENST00000626109 MAN1B1Q9UKM7 699 aa12.69□□□□□ -0.38
LINC00538-201ENST00000626109 RBBP6Q7Z6E9 1792 aaKnown RBP12.68□□□□□ -0.38
LINC00538-201ENST00000626109 STX10O60499 249 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 HOXA13P31271 388 aaPredicted RBP12.68□□□□□ -0.38
LINC00538-201ENST00000626109 STT3AP46977 705 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 HSD17B4P51659 736 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 SP3Q02447 781 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 GHRHRQ02643 423 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 NPY5RQ15761 445 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 USP17L6PQ6QN14 398 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 GPR142Q7Z601 462 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 PLEKHH3Q7Z736 793 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 FERMT2Q96AC1 680 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 PYM1Q9BRP8 204 aaKnown RBP12.68□□□□□ -0.38
LINC00538-201ENST00000626109 TRIM55Q9BYV6 548 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 A1CFQ9NQ94 594 aaKnown RBP12.68□□□□□ -0.38
LINC00538-201ENST00000626109 WBP1LQ9NX94 342 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 SEPT3Q9UH03 358 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 SERTAD1Q9UHV2 236 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 SPDYE3A6NKU9 549 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 GPR25O00155 361 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 MEIS2O14770 477 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 STRNO43815 780 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 ZSCAN20P17040 1043 aaPredicted RBP12.68□□□□□ -0.38
LINC00538-201ENST00000626109 SOX11P35716 441 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 FCGRTP55899 365 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 RPS6P62753 249 aaKnown RBP12.68□□□□□ -0.38
LINC00538-201ENST00000626109 AP3B2Q13367 1082 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 BAATQ14032 418 aaPredicted RBP12.68□□□□□ -0.38
LINC00538-201ENST00000626109 HLTFQ14527 1009 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC00538-201ENST00000626109 AGAP9Q5VTM2 703 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 SPECC1LQ69YQ0 1117 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 SLC30A10Q6XR72 485 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 DAAM2Q86T65 1068 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 ABRAQ8N0Z2 381 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 TBC1D5Q92609 795 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 DNAJC7Q99615 494 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 CYP39A1Q9NYL5 469 aa12.68□□□□□ -0.38
LINC00538-201ENST00000626109 TNPO2O14787 897 aaKnown RBP12.67□□□□□ -0.38
LINC00538-201ENST00000626109 IPO7O95373 1038 aaKnown RBP12.67□□□□□ -0.38
LINC00538-201ENST00000626109 RENBPP51606 427 aa12.67□□□□□ -0.38
LINC00538-201ENST00000626109 LACTBP83111 547 aaPredicted RBP12.67□□□□□ -0.38
LINC00538-201ENST00000626109 KRT25Q7Z3Z0 450 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms