RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 TLL2Q9Y6L7 1015 aa23.5■■□□□ 1.35
SPAST-204ENST00000621856 EMSYQ7Z589 1322 aa23.5■■□□□ 1.35
SPAST-204ENST00000621856 ZSCAN12O43309 604 aa23.5■■□□□ 1.35
SPAST-204ENST00000621856 INHBEP58166 350 aa23.5■■□□□ 1.35
SPAST-204ENST00000621856 MAMDC4Q6UXC1 1216 aa23.5■■□□□ 1.35
SPAST-204ENST00000621856 PLPPR4Q7Z2D5 763 aa23.5■■□□□ 1.35
SPAST-204ENST00000621856 TRIM50Q86XT4 487 aa23.5■■□□□ 1.35
SPAST-204ENST00000621856 IFNL1Q8IU54 200 aa23.5■■□□□ 1.35
SPAST-204ENST00000621856 TMEM143Q96AN5 459 aa23.5■■□□□ 1.35
SPAST-204ENST00000621856 NTPCRQ9BSD7 190 aaKnown RBP23.5■■□□□ 1.35
SPAST-204ENST00000621856 GPBP1L1Q9HC44 474 aaPredicted RBP23.5■■□□□ 1.35
SPAST-204ENST00000621856 H0YCG3 227 aa23.49■■□□□ 1.35
SPAST-204ENST00000621856 SNAI1O95863 264 aaPredicted RBP23.49■■□□□ 1.35
SPAST-204ENST00000621856 GH1P01241 217 aa23.49■■□□□ 1.35
SPAST-204ENST00000621856 SNRPFP62306 86 aaKnown RBP23.49■■□□□ 1.35
SPAST-204ENST00000621856 KCNMA1Q12791 1236 aa23.49■■□□□ 1.35
SPAST-204ENST00000621856 LAMC2Q13753 1193 aa23.49■■□□□ 1.35
SPAST-204ENST00000621856 MTF1Q14872 753 aa23.49■■□□□ 1.35
SPAST-204ENST00000621856 TARBP2Q15633 366 aaKnown RBP23.49■■□□□ 1.35
SPAST-204ENST00000621856 TOGARAM2Q6ZUX3 1019 aa23.49■■□□□ 1.35
SPAST-204ENST00000621856 BBXQ8WY36 941 aaPredicted RBP23.49■■□□□ 1.35
SPAST-204ENST00000621856 LSM14BQ9BX40 385 aaKnown RBP23.49■■□□□ 1.35
SPAST-204ENST00000621856 ZNHIT6Q9NWK9 470 aaKnown RBP23.49■■□□□ 1.35
SPAST-204ENST00000621856 KCNG1Q9UIX4 513 aa23.49■■□□□ 1.35
SPAST-204ENST00000621856 ABT1Q9ULW3 272 aaKnown RBP23.49■■□□□ 1.35
SPAST-204ENST00000621856 RBM47A0AV96 593 aaKnown RBP23.48■■□□□ 1.35
SPAST-204ENST00000621856 ARHGAP1Q07960 439 aa23.48■■□□□ 1.35
SPAST-204ENST00000621856 PTPN14Q15678 1187 aa23.48■■□□□ 1.35
SPAST-204ENST00000621856 RAD9BQ6WBX8 426 aa23.48■■□□□ 1.35
SPAST-204ENST00000621856 MAP4K3Q8IVH8 894 aa23.48■■□□□ 1.35
SPAST-204ENST00000621856 C12orf56Q8IXR9 622 aa23.48■■□□□ 1.35
SPAST-204ENST00000621856 NPLOC4Q8TAT6 608 aa23.48■■□□□ 1.35
SPAST-204ENST00000621856 BORCS6Q96GS4 357 aa23.48■■□□□ 1.35
SPAST-204ENST00000621856 CEP89Q96ST8 783 aa23.48■■□□□ 1.35
SPAST-204ENST00000621856 CRACR2AQ9BSW2 395 aa23.48■■□□□ 1.35
SPAST-204ENST00000621856 SMARCAD1Q9H4L7 1026 aa23.48■■□□□ 1.35
SPAST-204ENST00000621856 PCIF1Q9H4Z3 704 aa23.48■■□□□ 1.35
SPAST-204ENST00000621856 PPP2R2CQ9Y2T4 447 aa23.48■■□□□ 1.35
SPAST-204ENST00000621856 PPME1Q9Y570 386 aa23.48■■□□□ 1.35
SPAST-204ENST00000621856 TISP43B9A030 160 aa23.47■■□□□ 1.35
SPAST-204ENST00000621856 TNNT1P13805 278 aa23.47■■□□□ 1.35
SPAST-204ENST00000621856 ADCYAP1R1P41586 468 aa23.47■■□□□ 1.35
SPAST-204ENST00000621856 GJC2Q5T442 439 aaPredicted RBP23.47■■□□□ 1.35
SPAST-204ENST00000621856 ATP8B4Q8TF62 1192 aa23.47■■□□□ 1.35
SPAST-204ENST00000621856 CCDC102AQ96A19 550 aa23.47■■□□□ 1.35
SPAST-204ENST00000621856 TINF2Q9BSI4 451 aa23.47■■□□□ 1.35
SPAST-204ENST00000621856 KATNBL1Q9H079 304 aa23.47■■□□□ 1.35
SPAST-204ENST00000621856 EPHB6O15197 1021 aa23.47■■□□□ 1.35
SPAST-204ENST00000621856 ABCD1P33897 745 aa23.47■■□□□ 1.35
SPAST-204ENST00000621856 SREBF2Q12772 1141 aa23.47■■□□□ 1.35
SPAST-204ENST00000621856 PPP2R5AQ15172 486 aa23.47■■□□□ 1.35
SPAST-204ENST00000621856 CBWD1Q9BRT8 395 aa23.47■■□□□ 1.35
SPAST-204ENST00000621856 DESI2Q9BSY9 194 aa23.47■■□□□ 1.35
SPAST-204ENST00000621856 ADGRA3Q8IWK6 1321 aa23.46■■□□□ 1.35
SPAST-204ENST00000621856 ARL2P36404 184 aa23.46■■□□□ 1.35
SPAST-204ENST00000621856 SLC26A2P50443 739 aa23.46■■□□□ 1.35
SPAST-204ENST00000621856 PLCB4Q15147 1175 aa23.46■■□□□ 1.35
SPAST-204ENST00000621856 CACNA2D4Q7Z3S7 1137 aa23.46■■□□□ 1.35
SPAST-204ENST00000621856 ASAP3Q8TDY4 903 aa23.46■■□□□ 1.35
SPAST-204ENST00000621856 SLC35C1Q96A29 364 aa23.46■■□□□ 1.35
SPAST-204ENST00000621856 ZFYVE28Q9HCC9 887 aa23.46■■□□□ 1.35
SPAST-204ENST00000621856 HSPBP1Q9NZL4 362 aa23.46■■□□□ 1.35
SPAST-204ENST00000621856 ZHX1Q9UKY1 873 aaPredicted RBP23.46■■□□□ 1.35
SPAST-204ENST00000621856 TRPC6Q9Y210 931 aa23.46■■□□□ 1.35
SPAST-204ENST00000621856 FAM155AB1AL88 458 aaPredicted RBP23.45■■□□□ 1.34
SPAST-204ENST00000621856 TLR2O60603 784 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 MAFO75444 373 aaPredicted RBP23.45■■□□□ 1.34
SPAST-204ENST00000621856 KRT13P13646 458 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 GLRA2P23416 452 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 MAP2K5Q13163 448 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 XXYLT1Q8NBI6 393 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 RDH13Q8NBN7 331 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 SMC1BQ8NDV3 1235 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 EDEM3Q9BZQ6 932 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 ABHD16BQ9H3Z7 469 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 ARHGAP28Q9P2N2 729 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 LRRIQ4A6NIV6 560 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 ANKRD63C9JTQ0 380 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 CCDC175P0C221 793 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 NAMPTP43490 491 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 ACVR2BQ13705 512 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 MORN1Q5T089 497 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 C17orf99Q6UX52 265 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 NYAP1Q6ZVC0 841 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 DEPTORQ8TB45 409 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 TMEM174Q8WUU8 243 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 BICD1Q96G01 975 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 CHP1Q99653 195 aa23.45■■□□□ 1.34
SPAST-204ENST00000621856 R3HCC1Q9Y3T6 440 aaKnown RBP23.45■■□□□ 1.34
SPAST-204ENST00000621856 MEA1Q16626 185 aa23.44■■□□□ 1.34
SPAST-204ENST00000621856 RRAGAQ7L523 313 aa23.44■■□□□ 1.34
SPAST-204ENST00000621856 REXO1L1PQ8IX06 675 aa23.44■■□□□ 1.34
SPAST-204ENST00000621856 EXOC8Q8IYI6 725 aa23.44■■□□□ 1.34
SPAST-204ENST00000621856 MSL3Q8N5Y2 521 aaKnown RBP23.44■■□□□ 1.34
SPAST-204ENST00000621856 CEP72Q9P209 647 aa23.44■■□□□ 1.34
SPAST-204ENST00000621856 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.43■■□□□ 1.34
SPAST-204ENST00000621856 CNGA1P29973 690 aa23.43■■□□□ 1.34
SPAST-204ENST00000621856 BFSP1Q12934 665 aa23.43■■□□□ 1.34
SPAST-204ENST00000621856 STRN3Q13033 797 aa23.43■■□□□ 1.34
SPAST-204ENST00000621856 EXOC3L4Q17RC7 722 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms