RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 PNMA6AP0CW24 399 aaPredicted RBP10.84□□□□□ -0.67
VTA1-205ENST00000620996 GJA5P36382 358 aa10.84□□□□□ -0.67
VTA1-205ENST00000620996 ARHGAP25P42331 645 aa10.84□□□□□ -0.67
VTA1-205ENST00000620996 NPTX2P47972 431 aa10.84□□□□□ -0.67
VTA1-205ENST00000620996 MARSP56192 900 aaKnown RBP10.84□□□□□ -0.67
VTA1-205ENST00000620996 NCBP1Q09161 790 aaKnown RBP10.84□□□□□ -0.67
VTA1-205ENST00000620996 TEX35Q5T0J7 233 aa10.84□□□□□ -0.67
VTA1-205ENST00000620996 FBXO16Q8IX29 292 aaPredicted RBP10.84□□□□□ -0.67
VTA1-205ENST00000620996 CCDC127Q96BQ5 260 aa10.84□□□□□ -0.67
VTA1-205ENST00000620996 EFCC1Q9HA90 598 aa10.84□□□□□ -0.67
VTA1-205ENST00000620996 ATP6V0A4Q9HBG4 840 aa10.84□□□□□ -0.67
VTA1-205ENST00000620996 RBPJLQ9UBG7 517 aa10.84□□□□□ -0.67
VTA1-205ENST00000620996 USP20Q9Y2K6 914 aa10.84□□□□□ -0.67
VTA1-205ENST00000620996 DUSP10Q9Y6W6 482 aa10.84□□□□□ -0.67
VTA1-205ENST00000620996 GRIN3BO60391 1043 aa10.84□□□□□ -0.67
VTA1-205ENST00000620996 MAGEA1P43355 309 aa10.84□□□□□ -0.67
VTA1-205ENST00000620996 MYL7Q01449 175 aa10.84□□□□□ -0.67
VTA1-205ENST00000620996 PPP2R3AQ06190 1150 aa10.84□□□□□ -0.67
VTA1-205ENST00000620996 ERCC6LQ2NKX8 1250 aa10.84□□□□□ -0.67
VTA1-205ENST00000620996 ZC3H3Q8IXZ2 948 aaKnown RBP10.84□□□□□ -0.67
VTA1-205ENST00000620996 LACRTQ9GZZ8 138 aa10.84□□□□□ -0.67
VTA1-205ENST00000620996 CYP26B1Q9NR63 512 aa10.84□□□□□ -0.67
VTA1-205ENST00000620996 LRRIQ4A6NIV6 560 aa10.83□□□□□ -0.67
VTA1-205ENST00000620996 EIF3CLB5ME19 914 aaKnown RBP10.83□□□□□ -0.67
VTA1-205ENST00000620996 CNMDO75829 334 aa10.83□□□□□ -0.67
VTA1-205ENST00000620996 SLC25A27O95847 323 aa10.83□□□□□ -0.67
VTA1-205ENST00000620996 PON1P27169 355 aa10.83□□□□□ -0.67
VTA1-205ENST00000620996 ABHD15Q6UXT9 468 aa10.83□□□□□ -0.67
VTA1-205ENST00000620996 ZSWIM2Q8NEG5 633 aa10.83□□□□□ -0.67
VTA1-205ENST00000620996 BSNDQ8WZ55 320 aa10.83□□□□□ -0.67
VTA1-205ENST00000620996 UBXN4Q92575 508 aa10.83□□□□□ -0.67
VTA1-205ENST00000620996 EIF3CQ99613 913 aaKnown RBP10.83□□□□□ -0.67
VTA1-205ENST00000620996 NAPGQ99747 312 aaPredicted RBP10.83□□□□□ -0.67
VTA1-205ENST00000620996 HAUS4Q9H6D7 363 aa10.83□□□□□ -0.67
VTA1-205ENST00000620996 SEPT11Q9NVA2 429 aaKnown RBP10.83□□□□□ -0.67
VTA1-205ENST00000620996 HSPBP1Q9NZL4 362 aa10.83□□□□□ -0.67
VTA1-205ENST00000620996 PCDHA13Q9Y5I0 950 aa10.83□□□□□ -0.67
VTA1-205ENST00000620996 RLFQ13129 1914 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 CCL15-CCL14A0A0B4J2E2 113 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 RCCD1A6NED2 376 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 HNRNPDLO14979 420 aaKnown RBP10.83□□□□□ -0.68
VTA1-205ENST00000620996 HARSP12081 509 aaKnown RBP10.83□□□□□ -0.68
VTA1-205ENST00000620996 UCHL3P15374 230 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 DNA2P51530 1060 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 CCL15Q16663 113 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 ARHGAP44Q17R89 818 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 AZI2Q9H6S1 392 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 EXOC7Q9UPT5 735 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 KCNH4Q9UQ05 1017 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 PARP14Q460N5 1801 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 NFASCO94856 1347 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 CTIFO43310 598 aaKnown RBP10.83□□□□□ -0.68
VTA1-205ENST00000620996 DGAT1O75907 488 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 GCLMP48507 274 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 FMO5P49326 533 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 ALCAMQ13740 583 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 EMC2Q15006 297 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 XKR3Q5GH77 459 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 KLHDC7AQ5VTJ3 777 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 XXYLT1Q8NBI6 393 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 POMGNT1Q8WZA1 660 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 KIFAP3Q92845 792 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 PORCNQ9H237 461 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 RRAGCQ9HB90 399 aa10.83□□□□□ -0.68
VTA1-205ENST00000620996 OTOFQ9HC10 1997 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 PDHXO00330 501 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 TFRCP02786 760 aaKnown RBP10.82□□□□□ -0.68
VTA1-205ENST00000620996 OATP04181 439 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 SERPING1P05155 500 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 TCF7P36402 384 aaPredicted RBP10.82□□□□□ -0.68
VTA1-205ENST00000620996 USP8P40818 1118 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 CHMP4BP1P59074 171 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 ERVK-9P63128 1117 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 DLG4P78352 724 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 BFSP1Q12934 665 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 CBWD6Q4V339 395 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 CBWD3Q5JTY5 395 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 CBWD5Q5RIA9 395 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 TRIM50Q86XT4 487 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 MCPH1Q8NEM0 835 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 SLC7A3Q8WY07 619 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 SENP7Q9BQF6 1050 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 NUCKS1Q9H1E3 243 aaKnown RBP10.82□□□□□ -0.68
VTA1-205ENST00000620996 L2HGDHQ9H9P8 463 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 SUGCTQ9HAC7 445 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 ADAMTS1Q9UHI8 967 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 PNMA3Q9UL41 463 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 TBX20Q9UMR3 447 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 WDR90Q96KV7 1748 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 EMSYQ7Z589 1322 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 BUB1O43683 1085 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 GFPT2O94808 682 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 CELF2O95319 508 aaKnown RBP10.82□□□□□ -0.68
VTA1-205ENST00000620996 VAV2P52735 878 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 NEDD9Q14511 834 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 CAPZA3Q96KX2 299 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 TIPINQ9BVW5 301 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 GANQ9H2C0 597 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 HDAC6Q9UBN7 1215 aa10.82□□□□□ -0.68
VTA1-205ENST00000620996 RSPH14Q9UHP6 348 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms