RNA–Protein interactions for RNA: ENST00000608220.5

LINC00343-210, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 806 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-210ENST00000608220 CLEC4DQ8WXI8 215 aa5.35□□□□□ -1.55
LINC00343-210ENST00000608220 JADE2Q9NQC1 790 aa5.35□□□□□ -1.55
LINC00343-210ENST00000608220 ZDHHC9Q9Y397 364 aa5.35□□□□□ -1.55
LINC00343-210ENST00000608220 CEP350Q5VT06 3117 aa5.34□□□□□ -1.55
LINC00343-210ENST00000608220 ITGB4P16144 1822 aa5.34□□□□□ -1.55
LINC00343-210ENST00000608220 KIF13BQ9NQT8 1826 aa5.34□□□□□ -1.55
LINC00343-210ENST00000608220 LTFP02788 710 aa5.34□□□□□ -1.55
LINC00343-210ENST00000608220 SOD2P04179 222 aa5.34□□□□□ -1.55
LINC00343-210ENST00000608220 KRTAP5-3Q6L8H2 238 aa5.34□□□□□ -1.55
LINC00343-210ENST00000608220 DPH6Q7L8W6 267 aa5.34□□□□□ -1.55
LINC00343-210ENST00000608220 LIMS2Q7Z4I7 341 aa5.34□□□□□ -1.55
LINC00343-210ENST00000608220 PLEKHH3Q7Z736 793 aa5.34□□□□□ -1.55
LINC00343-210ENST00000608220 YTHDC1Q96MU7 727 aaKnown RBP5.34□□□□□ -1.55
LINC00343-210ENST00000608220 C8orf49Q96NF6 230 aa5.34□□□□□ -1.55
LINC00343-210ENST00000608220 RBM15Q96T37 977 aaKnown RBP eCLIP5.34□□□□□ -1.55
LINC00343-210ENST00000608220 CDC6Q99741 560 aa5.34□□□□□ -1.55
LINC00343-210ENST00000608220 ZFYVE21Q9BQ24 234 aa5.34□□□□□ -1.55
LINC00343-210ENST00000608220 ALG1Q9BT22 464 aa5.34□□□□□ -1.55
LINC00343-210ENST00000608220 DSEQ9UL01 958 aa5.34□□□□□ -1.55
LINC00343-210ENST00000608220 WASF3Q9UPY6 502 aa5.34□□□□□ -1.55
LINC00343-210ENST00000608220 IGSF1Q8N6C5 1336 aa5.33□□□□□ -1.56
LINC00343-210ENST00000608220 FAM47E-STBD1D6RA91 191 aa5.33□□□□□ -1.56
LINC00343-210ENST00000608220 NKRFO15226 690 aaKnown RBP eCLIP5.33□□□□□ -1.56
LINC00343-210ENST00000608220 LAMTOR5O43504 91 aa5.33□□□□□ -1.56
LINC00343-210ENST00000608220 B4GALT3O60512 393 aa5.33□□□□□ -1.56
LINC00343-210ENST00000608220 FBXO21O94952 628 aa5.33□□□□□ -1.56
LINC00343-210ENST00000608220 GLRBP48167 497 aa5.33□□□□□ -1.56
LINC00343-210ENST00000608220 TMF1P82094 1093 aa5.33□□□□□ -1.56
LINC00343-210ENST00000608220 SURF1Q15526 300 aa5.33□□□□□ -1.56
LINC00343-210ENST00000608220 PAN2Q504Q3 1202 aaKnown RBP5.33□□□□□ -1.56
LINC00343-210ENST00000608220 NAALADL2Q58DX5 795 aa5.33□□□□□ -1.56
LINC00343-210ENST00000608220 STYK1Q6J9G0 422 aa5.33□□□□□ -1.56
LINC00343-210ENST00000608220 COL23A1Q86Y22 540 aaPredicted RBP5.33□□□□□ -1.56
LINC00343-210ENST00000608220 TTLL11Q8NHH1 800 aa5.33□□□□□ -1.56
LINC00343-210ENST00000608220 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.33□□□□□ -1.56
LINC00343-210ENST00000608220 ZCCHC14Q8WYQ9 949 aaKnown RBP5.33□□□□□ -1.56
LINC00343-210ENST00000608220 LTV1Q96GA3 475 aaPredicted RBP5.33□□□□□ -1.56
LINC00343-210ENST00000608220 SAMD11Q96NU1 681 aa5.33□□□□□ -1.56
LINC00343-210ENST00000608220 IPO9Q96P70 1041 aaKnown RBP5.33□□□□□ -1.56
LINC00343-210ENST00000608220 SPATA9Q9BWV2 254 aa5.33□□□□□ -1.56
LINC00343-210ENST00000608220 SLC12A5Q9H2X9 1139 aa5.33□□□□□ -1.56
LINC00343-210ENST00000608220 IPPKQ9H8X2 491 aa5.33□□□□□ -1.56
LINC00343-210ENST00000608220 BARX1Q9HBU1 254 aaPredicted RBP5.33□□□□□ -1.56
LINC00343-210ENST00000608220 PFDN2Q9UHV9 154 aa5.33□□□□□ -1.56
LINC00343-210ENST00000608220 TNRC6CQ9HCJ0 1690 aaKnown RBP5.33□□□□□ -1.56
LINC00343-210ENST00000608220 C10orf71Q711Q0 1435 aa5.32□□□□□ -1.56
LINC00343-210ENST00000608220 MAP2P11137 1827 aaKnown RBP5.32□□□□□ -1.56
LINC00343-210ENST00000608220 WDR90Q96KV7 1748 aa5.32□□□□□ -1.56
LINC00343-210ENST00000608220 NPEPPSL1A6NEC2 478 aa5.32□□□□□ -1.56
LINC00343-210ENST00000608220 PDPK1O15530 556 aa5.32□□□□□ -1.56
LINC00343-210ENST00000608220 B4GALT4O60513 344 aa5.32□□□□□ -1.56
LINC00343-210ENST00000608220 CKMP06732 381 aa5.32□□□□□ -1.56
LINC00343-210ENST00000608220 FAHP16930 419 aa5.32□□□□□ -1.56
LINC00343-210ENST00000608220 ADAM17P78536 824 aa5.32□□□□□ -1.56
LINC00343-210ENST00000608220 MTERF2Q49AM1 385 aa5.32□□□□□ -1.56
LINC00343-210ENST00000608220 SPATC1Q76KD6 591 aa5.32□□□□□ -1.56
LINC00343-210ENST00000608220 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.32□□□□□ -1.56
LINC00343-210ENST00000608220 KBTBD2Q8IY47 623 aa5.32□□□□□ -1.56
LINC00343-210ENST00000608220 UHMK1Q8TAS1 419 aaKnown RBP5.32□□□□□ -1.56
LINC00343-210ENST00000608220 TANGO6Q9C0B7 1094 aa5.32□□□□□ -1.56
LINC00343-210ENST00000608220 DLL4Q9NR61 685 aa5.32□□□□□ -1.56
LINC00343-210ENST00000608220 TRAF6Q9Y4K3 522 aa5.32□□□□□ -1.56
LINC00343-210ENST00000608220 ARFGEF1Q9Y6D6 1849 aa5.32□□□□□ -1.56
LINC00343-210ENST00000608220 C4AP0C0L4 1744 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 COL5A3P25940 1745 aaPredicted RBP5.31□□□□□ -1.56
LINC00343-210ENST00000608220 KIAA1551Q9HCM1 1747 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 TOMM70O94826 608 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 HSP90AB1P08238 724 aaKnown RBP5.31□□□□□ -1.56
LINC00343-210ENST00000608220 ENO2P09104 434 aaPredicted RBP5.31□□□□□ -1.56
LINC00343-210ENST00000608220 ATP2B1P20020 1258 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 TGFB2P61812 414 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 SSRP1Q08945 709 aaKnown RBP5.31□□□□□ -1.56
LINC00343-210ENST00000608220 NFATC3Q12968 1075 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 SKIDA1Q1XH10 827 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 CPZQ66K79 652 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 ARHGEF18Q6ZSZ5 1173 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 KCTD1Q719H9 257 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 MTDHQ86UE4 582 aaKnown RBP5.31□□□□□ -1.56
LINC00343-210ENST00000608220 PROSER1Q86XN7 944 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 KLHL36Q8N4N3 616 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 IGDCC4Q8TDY8 1250 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 TESK2Q96S53 571 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 SIN3AQ96ST3 1273 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 CD244Q9BZW8 370 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 TMOD3Q9NYL9 352 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 HSPBP1Q9NZL4 362 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 ARHGAP20Q9P2F6 1191 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 ST6GALNAC2Q9UJ37 374 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 ZFP69BQ9UJL9 534 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 PXDNLA1KZ92 1463 aa5.31□□□□□ -1.56
LINC00343-210ENST00000608220 KDRP35968 1356 aa5.3□□□□□ -1.56
LINC00343-210ENST00000608220 BRCA1P38398 1863 aaKnown RBP5.3□□□□□ -1.56
LINC00343-210ENST00000608220 PPP2CBP62714 309 aa5.3□□□□□ -1.56
LINC00343-210ENST00000608220 PPP2CAP67775 309 aa5.3□□□□□ -1.56
LINC00343-210ENST00000608220 PFKPQ01813 784 aa5.3□□□□□ -1.56
LINC00343-210ENST00000608220 RRS1Q15050 365 aaKnown RBP5.3□□□□□ -1.56
LINC00343-210ENST00000608220 SMAD2Q15796 467 aaKnown RBP5.3□□□□□ -1.56
LINC00343-210ENST00000608220 NBPF6Q5VWK0 638 aa5.3□□□□□ -1.56
LINC00343-210ENST00000608220 EP400NLQ6ZTU2 488 aa5.3□□□□□ -1.56
LINC00343-210ENST00000608220 SCUBE1Q8IWY4 988 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms