RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 TMX1Q9H3N1 280 aa13.13□□□□□ -0.31
FARP1-230ENST00000600380 ERVK-5Q9HDB9 667 aa13.13□□□□□ -0.31
FARP1-230ENST00000600380 IL23AQ9NPF7 189 aa13.13□□□□□ -0.31
FARP1-230ENST00000600380 KBTBD4Q9NVX7 518 aa13.13□□□□□ -0.31
FARP1-230ENST00000600380 FAM13BQ9NYF5 915 aa13.13□□□□□ -0.31
FARP1-230ENST00000600380 USP20Q9Y2K6 914 aa13.13□□□□□ -0.31
FARP1-230ENST00000600380 LOXHD1Q8IVV2 1947 aa13.13□□□□□ -0.31
FARP1-230ENST00000600380 ADGRA3Q8IWK6 1321 aa13.13□□□□□ -0.31
FARP1-230ENST00000600380 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.12□□□□□ -0.31
FARP1-230ENST00000600380 GAS2O43903 313 aaKnown RBP13.12□□□□□ -0.31
FARP1-230ENST00000600380 PRPF40AO75400 957 aaKnown RBP13.12□□□□□ -0.31
FARP1-230ENST00000600380 PPIGQ13427 754 aaKnown RBP eCLIP13.12□□□□□ -0.31
FARP1-230ENST00000600380 SNW1Q13573 536 aaKnown RBP13.12□□□□□ -0.31
FARP1-230ENST00000600380 SHHQ15465 462 aa13.12□□□□□ -0.31
FARP1-230ENST00000600380 PLEKHG4Q58EX7 1191 aa13.12□□□□□ -0.31
FARP1-230ENST00000600380 DYMQ7RTS9 669 aa13.12□□□□□ -0.31
FARP1-230ENST00000600380 RTN4RL1Q86UN2 441 aaPredicted RBP13.12□□□□□ -0.31
FARP1-230ENST00000600380 FMR1NBQ8N0W7 255 aaPredicted RBP13.12□□□□□ -0.31
FARP1-230ENST00000600380 IQUBQ8NA54 791 aa13.12□□□□□ -0.31
FARP1-230ENST00000600380 RNF149Q8NC42 400 aa13.12□□□□□ -0.31
FARP1-230ENST00000600380 TCP11Q8WWU5 503 aa13.12□□□□□ -0.31
FARP1-230ENST00000600380 NLRP7Q8WX94 980 aa13.12□□□□□ -0.31
FARP1-230ENST00000600380 LINC01599Q8WXQ3 324 aa13.12□□□□□ -0.31
FARP1-230ENST00000600380 CXXC1Q9P0U4 656 aaPredicted RBP13.12□□□□□ -0.31
FARP1-230ENST00000600380 TTLL13PA6NNM8 815 aa13.11□□□□□ -0.31
FARP1-230ENST00000600380 MGEA5O60502 916 aa13.11□□□□□ -0.31
FARP1-230ENST00000600380 EDN1P05305 212 aa13.11□□□□□ -0.31
FARP1-230ENST00000600380 SLFN14P0C7P3 912 aa13.11□□□□□ -0.31
FARP1-230ENST00000600380 EIF4BP23588 611 aaKnown RBP13.11□□□□□ -0.31
FARP1-230ENST00000600380 RFC2P35250 354 aa13.11□□□□□ -0.31
FARP1-230ENST00000600380 SYKP43405 635 aa13.11□□□□□ -0.31
FARP1-230ENST00000600380 PTENP60484 403 aa13.11□□□□□ -0.31
FARP1-230ENST00000600380 CHRDL2Q6WN34 429 aa13.11□□□□□ -0.31
FARP1-230ENST00000600380 TSHZ1Q6ZSZ6 1077 aa13.11□□□□□ -0.31
FARP1-230ENST00000600380 SV2BQ7L1I2 683 aa13.11□□□□□ -0.31
FARP1-230ENST00000600380 EXOC8Q8IYI6 725 aa13.11□□□□□ -0.31
FARP1-230ENST00000600380 DDX12PQ92771 950 aa13.11□□□□□ -0.31
FARP1-230ENST00000600380 PAGE5Q96GU1 130 aa13.11□□□□□ -0.31
FARP1-230ENST00000600380 PADI3Q9ULW8 664 aa13.11□□□□□ -0.31
FARP1-230ENST00000600380 ST3GAL5Q9UNP4 418 aa13.11□□□□□ -0.31
FARP1-230ENST00000600380 ASAP2O43150 1006 aa13.1□□□□□ -0.31
FARP1-230ENST00000600380 ZNF202O95125 648 aa13.1□□□□□ -0.31
FARP1-230ENST00000600380 RPLP2P05387 115 aaKnown RBP13.1□□□□□ -0.31
FARP1-230ENST00000600380 PRR29P0C7W0 189 aa13.1□□□□□ -0.31
FARP1-230ENST00000600380 AFMP43652 599 aa13.1□□□□□ -0.31
FARP1-230ENST00000600380 NPTX2P47972 431 aa13.1□□□□□ -0.31
FARP1-230ENST00000600380 ZNF131P52739 623 aa13.1□□□□□ -0.31
FARP1-230ENST00000600380 PEX3P56589 373 aa13.1□□□□□ -0.31
FARP1-230ENST00000600380 MBTD1Q05BQ5 628 aa13.1□□□□□ -0.31
FARP1-230ENST00000600380 MXD4Q14582 209 aaPredicted RBP13.1□□□□□ -0.31
FARP1-230ENST00000600380 AMHR2Q16671 573 aa13.1□□□□□ -0.31
FARP1-230ENST00000600380 OTOP2Q7RTS6 562 aa13.1□□□□□ -0.31
FARP1-230ENST00000600380 TAS1R3Q7RTX0 852 aa13.1□□□□□ -0.31
FARP1-230ENST00000600380 ZNF410Q86VK4 478 aa13.1□□□□□ -0.31
FARP1-230ENST00000600380 KIFAP3Q92845 792 aa13.1□□□□□ -0.31
FARP1-230ENST00000600380 FIZ1Q96SL8 496 aa13.1□□□□□ -0.31
FARP1-230ENST00000600380 FGFBP2Q9BYJ0 223 aa13.1□□□□□ -0.31
FARP1-230ENST00000600380 GCOM2Q9BZD3 368 aaPredicted RBP13.1□□□□□ -0.31
FARP1-230ENST00000600380 UBE2OQ9C0C9 1292 aaKnown RBP13.1□□□□□ -0.31
FARP1-230ENST00000600380 BLZF1Q9H2G9 400 aa13.1□□□□□ -0.31
FARP1-230ENST00000600380 LMBRD1Q9NUN5 540 aa13.1□□□□□ -0.31
FARP1-230ENST00000600380 LAMA2P24043 3122 aaKnown RBP13.09□□□□□ -0.31
FARP1-230ENST00000600380 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.09□□□□□ -0.31
FARP1-230ENST00000600380 LRRIQ4A6NIV6 560 aa13.09□□□□□ -0.31
FARP1-230ENST00000600380 M0QZ92 97 aa13.09□□□□□ -0.31
FARP1-230ENST00000600380 SLC16A4O15374 487 aa13.09□□□□□ -0.31
FARP1-230ENST00000600380 B4GALT5O43286 388 aa13.09□□□□□ -0.31
FARP1-230ENST00000600380 NR1I2O75469 434 aa13.09□□□□□ -0.31
FARP1-230ENST00000600380 RPS6KA5O75582 802 aa13.09□□□□□ -0.31
FARP1-230ENST00000600380 FGBP02675 491 aa13.09□□□□□ -0.31
FARP1-230ENST00000600380 PLS3P13797 630 aa13.09□□□□□ -0.31
FARP1-230ENST00000600380 NFX1Q12986 1120 aaKnown RBP13.09□□□□□ -0.31
FARP1-230ENST00000600380 CUL4BQ13620 913 aa13.09□□□□□ -0.31
FARP1-230ENST00000600380 DSC3Q14574 896 aa13.09□□□□□ -0.31
FARP1-230ENST00000600380 RASIP1Q5U651 963 aa13.09□□□□□ -0.31
FARP1-230ENST00000600380 CDCA2Q69YH5 1023 aaPredicted RBP13.09□□□□□ -0.31
FARP1-230ENST00000600380 FAM109BQ6ICB4 259 aaPredicted RBP13.09□□□□□ -0.31
FARP1-230ENST00000600380 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.09□□□□□ -0.31
FARP1-230ENST00000600380 KRBA2Q6ZNG9 492 aa13.09□□□□□ -0.31
FARP1-230ENST00000600380 TMCO2Q7Z6W1 182 aaPredicted RBP13.09□□□□□ -0.31
FARP1-230ENST00000600380 IFNLR1Q8IU57 520 aaPredicted RBP13.09□□□□□ -0.31
FARP1-230ENST00000600380 RPUSD2Q8IZ73 545 aaKnown RBP13.09□□□□□ -0.31
FARP1-230ENST00000600380 HPS3Q969F9 1004 aa13.09□□□□□ -0.31
FARP1-230ENST00000600380 SCLT1Q96NL6 688 aa13.09□□□□□ -0.31
FARP1-230ENST00000600380 C7orf25Q9BPX7 421 aa13.09□□□□□ -0.31
FARP1-230ENST00000600380 IFIH1Q9BYX4 1025 aaKnown RBP13.09□□□□□ -0.31
FARP1-230ENST00000600380 TRIM9Q9C026 710 aa13.09□□□□□ -0.31
FARP1-230ENST00000600380 CCDC113Q9H0I3 377 aa13.09□□□□□ -0.31
FARP1-230ENST00000600380 KCND2Q9NZV8 630 aa13.09□□□□□ -0.31
FARP1-230ENST00000600380 COLQQ9Y215 455 aaPredicted RBP13.09□□□□□ -0.31
FARP1-230ENST00000600380 SQORQ9Y6N5 450 aa13.09□□□□□ -0.31
FARP1-230ENST00000600380 LAMA3Q16787 3333 aa13.08□□□□□ -0.31
FARP1-230ENST00000600380 FRMD3A2A2Y4 597 aa13.08□□□□□ -0.32
FARP1-230ENST00000600380 GOLGA6L4A6NEF3 574 aa13.08□□□□□ -0.32
FARP1-230ENST00000600380 ENPP3O14638 875 aa13.08□□□□□ -0.32
FARP1-230ENST00000600380 PARNO95453 639 aaKnown RBP13.08□□□□□ -0.32
FARP1-230ENST00000600380 KRT18P05783 430 aaKnown RBP13.08□□□□□ -0.32
FARP1-230ENST00000600380 HOXA11P31270 313 aaPredicted RBP13.08□□□□□ -0.32
FARP1-230ENST00000600380 BMP8BP34820 402 aa13.08□□□□□ -0.32
FARP1-230ENST00000600380 NAMPTP43490 491 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms