RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 PLCB3Q01970 1234 aa25.57■■□□□ 1.68
CDKN2A-212ENST00000578845 SMAD2Q15796 467 aaKnown RBP25.57■■□□□ 1.68
CDKN2A-212ENST00000578845 LRRC55Q6ZSA7 311 aa25.57■■□□□ 1.68
CDKN2A-212ENST00000578845 EXOC8Q8IYI6 725 aa25.57■■□□□ 1.68
CDKN2A-212ENST00000578845 SLFN12Q8IYM2 578 aa25.57■■□□□ 1.68
CDKN2A-212ENST00000578845 MSLNLQ96KJ4 702 aa25.57■■□□□ 1.68
CDKN2A-212ENST00000578845 FDXACB1Q9BRP7 624 aaPredicted RBP25.57■■□□□ 1.68
CDKN2A-212ENST00000578845 INO80BQ9C086 356 aaPredicted RBP25.57■■□□□ 1.68
CDKN2A-212ENST00000578845 IGFLR1Q9H665 355 aa25.57■■□□□ 1.68
CDKN2A-212ENST00000578845 DHX33Q9H6R0 707 aaKnown RBP25.57■■□□□ 1.68
CDKN2A-212ENST00000578845 TLR9Q9NR96 1032 aa25.57■■□□□ 1.68
CDKN2A-212ENST00000578845 NPEPPSP55786 919 aa25.56■■□□□ 1.68
CDKN2A-212ENST00000578845 ZP2Q05996 745 aa25.56■■□□□ 1.68
CDKN2A-212ENST00000578845 SMAD4Q13485 552 aaKnown RBP25.56■■□□□ 1.68
CDKN2A-212ENST00000578845 CLLU1OSQ5K130 101 aa25.56■■□□□ 1.68
CDKN2A-212ENST00000578845 PDE12Q6L8Q7 609 aaKnown RBP25.56■■□□□ 1.68
CDKN2A-212ENST00000578845 RHPN2Q8IUC4 686 aa25.56■■□□□ 1.68
CDKN2A-212ENST00000578845 THNSL1Q8IYQ7 743 aa25.56■■□□□ 1.68
CDKN2A-212ENST00000578845 SLC7A3Q8WY07 619 aa25.56■■□□□ 1.68
CDKN2A-212ENST00000578845 RSPH1Q8WYR4 309 aa25.56■■□□□ 1.68
CDKN2A-212ENST00000578845 LXNQ9BS40 222 aa25.56■■□□□ 1.68
CDKN2A-212ENST00000578845 C19orf67A6NJJ6 358 aa25.55■■□□□ 1.68
CDKN2A-212ENST00000578845 FSCN2O14926 492 aa25.55■■□□□ 1.68
CDKN2A-212ENST00000578845 MBTPS2O43462 519 aa25.55■■□□□ 1.68
CDKN2A-212ENST00000578845 CSDE1O75534 798 aaKnown RBP25.55■■□□□ 1.68
CDKN2A-212ENST00000578845 RFC5P40937 340 aa25.55■■□□□ 1.68
CDKN2A-212ENST00000578845 ADHFE1Q8IWW8 467 aa25.55■■□□□ 1.68
CDKN2A-212ENST00000578845 ABI1Q8IZP0 508 aa25.55■■□□□ 1.68
CDKN2A-212ENST00000578845 FSD2A1L4K1 749 aa25.54■■□□□ 1.68
CDKN2A-212ENST00000578845 JAK2O60674 1132 aa25.54■■□□□ 1.68
CDKN2A-212ENST00000578845 BAG4O95429 457 aaKnown RBP25.54■■□□□ 1.68
CDKN2A-212ENST00000578845 SEC24BO95487 1268 aa25.54■■□□□ 1.68
CDKN2A-212ENST00000578845 EYA4O95677 639 aa25.54■■□□□ 1.68
CDKN2A-212ENST00000578845 PPM1AP35813 382 aa25.54■■□□□ 1.68
CDKN2A-212ENST00000578845 NRIP1P48552 1158 aa25.54■■□□□ 1.68
CDKN2A-212ENST00000578845 ST3GAL1Q11201 340 aa25.54■■□□□ 1.68
CDKN2A-212ENST00000578845 KCNT2Q6UVM3 1135 aa25.54■■□□□ 1.68
CDKN2A-212ENST00000578845 ZNF579Q8NAF0 562 aaKnown RBP25.54■■□□□ 1.68
CDKN2A-212ENST00000578845 CEP170P1Q96L14 293 aa25.54■■□□□ 1.68
CDKN2A-212ENST00000578845 ZSWIM4Q9H7M6 989 aa25.54■■□□□ 1.68
CDKN2A-212ENST00000578845 IFT122Q9HBG6 1241 aa25.54■■□□□ 1.68
CDKN2A-212ENST00000578845 CLEC1BQ9P126 229 aa25.54■■□□□ 1.68
CDKN2A-212ENST00000578845 CD207Q9UJ71 328 aa25.54■■□□□ 1.68
CDKN2A-212ENST00000578845 PCDHGC5Q9Y5F6 944 aa25.54■■□□□ 1.68
CDKN2A-212ENST00000578845 COL4A3BPQ9Y5P4 624 aa25.54■■□□□ 1.68
CDKN2A-212ENST00000578845 GAS2O43903 313 aaKnown RBP25.53■■□□□ 1.68
CDKN2A-212ENST00000578845 MARCH6O60337 910 aa25.53■■□□□ 1.68
CDKN2A-212ENST00000578845 GPR37L1O60883 481 aa25.53■■□□□ 1.68
CDKN2A-212ENST00000578845 GLP2RO95838 553 aa25.53■■□□□ 1.68
CDKN2A-212ENST00000578845 YWHABP31946 246 aaKnown RBP25.53■■□□□ 1.68
CDKN2A-212ENST00000578845 SSTR3P32745 418 aaPredicted RBP25.53■■□□□ 1.68
CDKN2A-212ENST00000578845 PHKA2P46019 1235 aa25.53■■□□□ 1.68
CDKN2A-212ENST00000578845 NDUFV1P49821 464 aa25.53■■□□□ 1.68
CDKN2A-212ENST00000578845 ERVFC1P60507 584 aa25.53■■□□□ 1.68
CDKN2A-212ENST00000578845 COASYQ13057 564 aa25.53■■□□□ 1.68
CDKN2A-212ENST00000578845 NCAPH2Q6IBW4 605 aa25.53■■□□□ 1.68
CDKN2A-212ENST00000578845 KSR1Q8IVT5 923 aa25.53■■□□□ 1.68
CDKN2A-212ENST00000578845 DIS3L2Q8IYB7 885 aaKnown RBP25.53■■□□□ 1.68
CDKN2A-212ENST00000578845 MRPS27Q92552 414 aaKnown RBP25.53■■□□□ 1.68
CDKN2A-212ENST00000578845 ZNF558Q96NG5 402 aa25.53■■□□□ 1.68
CDKN2A-212ENST00000578845 CDCA3Q99618 268 aaPredicted RBP25.53■■□□□ 1.68
CDKN2A-212ENST00000578845 MRPL9Q9BYD2 267 aaKnown RBP25.53■■□□□ 1.68
CDKN2A-212ENST00000578845 C11orf16Q9NQ32 467 aa25.53■■□□□ 1.68
CDKN2A-212ENST00000578845 RGL1Q9NZL6 768 aa25.53■■□□□ 1.68
CDKN2A-212ENST00000578845 BTBD18B2RXH4 712 aa25.52■■□□□ 1.68
CDKN2A-212ENST00000578845 POLGP54098 1239 aaPredicted RBP25.52■■□□□ 1.68
CDKN2A-212ENST00000578845 CLUL1Q15846 466 aa25.52■■□□□ 1.68
CDKN2A-212ENST00000578845 OTUD6AQ7L8S5 288 aa25.52■■□□□ 1.68
CDKN2A-212ENST00000578845 RNF169Q8NCN4 708 aa25.52■■□□□ 1.68
CDKN2A-212ENST00000578845 SMRP1Q8NCR6 262 aa25.52■■□□□ 1.68
CDKN2A-212ENST00000578845 DYDC2Q96IM9 177 aa25.52■■□□□ 1.68
CDKN2A-212ENST00000578845 NLRP4Q96MN2 994 aa25.52■■□□□ 1.68
CDKN2A-212ENST00000578845 TLE6Q9H808 572 aa25.52■■□□□ 1.68
CDKN2A-212ENST00000578845 ZNF623O75123 536 aa25.51■■□□□ 1.67
CDKN2A-212ENST00000578845 LYPLA2O95372 231 aa25.51■■□□□ 1.67
CDKN2A-212ENST00000578845 SKIP12755 728 aa25.51■■□□□ 1.67
CDKN2A-212ENST00000578845 TMEM31Q5JXX7 168 aa25.51■■□□□ 1.67
CDKN2A-212ENST00000578845 HELQQ8TDG4 1101 aa25.51■■□□□ 1.67
CDKN2A-212ENST00000578845 MICAL1Q8TDZ2 1067 aa25.51■■□□□ 1.67
CDKN2A-212ENST00000578845 PSPC1Q8WXF1 523 aaKnown RBP25.51■■□□□ 1.67
CDKN2A-212ENST00000578845 LRFN3Q9BTN0 628 aa25.51■■□□□ 1.67
CDKN2A-212ENST00000578845 PUF60Q9UHX1 559 aaKnown RBP25.51■■□□□ 1.67
CDKN2A-212ENST00000578845 PIN4Q9Y237 131 aaKnown RBP25.51■■□□□ 1.67
CDKN2A-212ENST00000578845 SLITRK3O94933 977 aa25.5■■□□□ 1.67
CDKN2A-212ENST00000578845 RAB27AP51159 221 aa25.5■■□□□ 1.67
CDKN2A-212ENST00000578845 TRIM29Q14134 588 aa25.5■■□□□ 1.67
CDKN2A-212ENST00000578845 CALCRLQ16602 461 aa25.5■■□□□ 1.67
CDKN2A-212ENST00000578845 DUSP6Q16828 381 aa25.5■■□□□ 1.67
CDKN2A-212ENST00000578845 TWF2Q6IBS0 349 aaKnown RBP25.5■■□□□ 1.67
CDKN2A-212ENST00000578845 CATSPER4Q7RTX7 472 aa25.5■■□□□ 1.67
CDKN2A-212ENST00000578845 RBM23Q86U06 439 aaKnown RBP25.5■■□□□ 1.67
CDKN2A-212ENST00000578845 PRPF31Q8WWY3 499 aaKnown RBP25.5■■□□□ 1.67
CDKN2A-212ENST00000578845 POP1Q99575 1024 aaKnown RBP25.5■■□□□ 1.67
CDKN2A-212ENST00000578845 HSD17B14Q9BPX1 270 aa25.5■■□□□ 1.67
CDKN2A-212ENST00000578845 NGRNQ9NPE2 291 aaKnown RBP25.5■■□□□ 1.67
CDKN2A-212ENST00000578845 AGPAT5Q9NUQ2 364 aa25.5■■□□□ 1.67
CDKN2A-212ENST00000578845 PCDHA12Q9UN75 941 aa25.5■■□□□ 1.67
CDKN2A-212ENST00000578845 CYP4A11Q02928 519 aa25.49■■□□□ 1.67
CDKN2A-212ENST00000578845 KCNC3Q14003 757 aa25.49■■□□□ 1.67
CDKN2A-212ENST00000578845 CTTNQ14247 550 aaKnown RBP25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms