RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 HOXA2O43364 376 aa12.18□□□□□ -0.46
PPP4R1-208ENST00000578178 CSDE1O75534 798 aaKnown RBP12.18□□□□□ -0.46
PPP4R1-208ENST00000578178 SPATA31C1P0DKV0 1188 aa12.18□□□□□ -0.46
PPP4R1-208ENST00000578178 TOB1P50616 345 aaPredicted RBP12.18□□□□□ -0.46
PPP4R1-208ENST00000578178 FXR2P51116 673 aaKnown RBP eCLIP12.18□□□□□ -0.46
PPP4R1-208ENST00000578178 FAM189BP81408 668 aa12.18□□□□□ -0.46
PPP4R1-208ENST00000578178 LAMTOR4Q0VGL1 99 aa12.18□□□□□ -0.46
PPP4R1-208ENST00000578178 FERMT3Q86UX7 667 aa12.18□□□□□ -0.46
PPP4R1-208ENST00000578178 CATSPER3Q86XQ3 398 aa12.18□□□□□ -0.46
PPP4R1-208ENST00000578178 ECHDC2Q86YB7 292 aa12.18□□□□□ -0.46
PPP4R1-208ENST00000578178 PIGOQ8TEQ8 1089 aa12.18□□□□□ -0.46
PPP4R1-208ENST00000578178 ATXN2LQ8WWM7 1075 aaKnown RBP12.18□□□□□ -0.46
PPP4R1-208ENST00000578178 PRPF31Q8WWY3 499 aaKnown RBP12.18□□□□□ -0.46
PPP4R1-208ENST00000578178 POLR3CQ9BUI4 534 aaPredicted RBP12.18□□□□□ -0.46
PPP4R1-208ENST00000578178 LMAN2LQ9H0V9 348 aa12.18□□□□□ -0.46
PPP4R1-208ENST00000578178 IFT122Q9HBG6 1241 aa12.18□□□□□ -0.46
PPP4R1-208ENST00000578178 CHST12Q9NRB3 414 aa12.18□□□□□ -0.46
PPP4R1-208ENST00000578178 PIN4Q9Y237 131 aaKnown RBP12.18□□□□□ -0.46
PPP4R1-208ENST00000578178 PCDHB6Q9Y5E3 794 aa12.18□□□□□ -0.46
PPP4R1-208ENST00000578178 TBKBP1A7MCY6 615 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 LAD1O00515 517 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 ASAP2O43150 1006 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 MED24O75448 989 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 FGFR1P11362 822 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 XRCC6P12956 609 aaKnown RBP eCLIP12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 RPA1P27694 616 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 PHKA2P46019 1235 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 PTGDRQ13258 359 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 CUL4AQ13619 759 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 MXD4Q14582 209 aaPredicted RBP12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 RILPL1Q5EBL4 403 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 TJAP1Q5JTD0 557 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 FAM102BQ5T8I3 360 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 POTEGQ6S5H5 508 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 CATSPER4Q7RTX7 472 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 SRGAP1Q7Z6B7 1085 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 C4orf32Q8N8J7 132 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 RNF149Q8NC42 400 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 P2RX5Q93086 422 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 TRAIPQ9BWF2 469 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 RAB34Q9BZG1 259 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 TMEM117Q9H0C3 514 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 AGPAT5Q9NUQ2 364 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 DBR1Q9UK59 544 aaKnown RBP12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 PLXNA4Q9HCM2 1894 aa12.17□□□□□ -0.46
PPP4R1-208ENST00000578178 REV3LO60673 3130 aa12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 A0A0U1RQF3 1178 aa12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 GRM6O15303 877 aa12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 USO1O60763 962 aaKnown RBP12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 SRGAP2CP0DJJ0 459 aa12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 ATF7P17544 494 aaPredicted RBP12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 MUTP22033 750 aa12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 PRPHP41219 470 aa12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 MRPS5P82675 430 aaKnown RBP12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 TFDP1Q14186 410 aa12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 NAALADL2Q58DX5 795 aa12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 TWF2Q6IBS0 349 aaKnown RBP12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 ABI1Q8IZP0 508 aa12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 LRRC43Q8N309 656 aa12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 RNF169Q8NCN4 708 aa12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 NACC1Q96RE7 527 aa12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 POLR3FQ9H1D9 316 aaPredicted RBP12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 RNF19AQ9NV58 838 aa12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 COG5Q9UP83 839 aa12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 STK24Q9Y6E0 443 aa12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 MYO7AQ13402 2215 aa12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 SPTBN5Q9NRC6 3674 aaKnown RBP12.16□□□□□ -0.46
PPP4R1-208ENST00000578178 A0A0C4DFX4 3053 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 TTC28Q96AY4 2481 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 DLL1O00548 723 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 EOMESO95936 686 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 SKIP12755 728 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 LAG3P18627 525 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 ARL2P36404 184 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 CCT6AP40227 531 aaKnown RBP12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 RAB27AP51159 221 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 CAPSQ13938 189 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 AAK1Q2M2I8 961 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 CLLU1OSQ5K130 101 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 SPOUT1Q5T280 376 aaKnown RBP12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 LARP1BQ659C4 914 aaKnown RBP12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 ZNF598Q86UK7 904 aaKnown RBP12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 IFNLR1Q8IU57 520 aaPredicted RBP12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 IGSF22Q8N9C0 903 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 MCPH1Q8NEM0 835 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 ASAP3Q8TDY4 903 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 SNX29Q8TEQ0 813 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 RSPH1Q8WYR4 309 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 HLA-CQ95604 372 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 ASB2Q96Q27 587 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 COL25A1Q9BXS0 654 aaPredicted RBP12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 NSUN3Q9H649 340 aaKnown RBP12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 MINDY3Q9H8M7 445 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 AAASQ9NRG9 546 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 HCSTQ9UBK5 93 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 LRWD1Q9UFC0 647 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 GTF3C3Q9Y5Q9 886 aa12.15□□□□□ -0.46
PPP4R1-208ENST00000578178 A0A087WWV3 80 aa12.14□□□□□ -0.47
PPP4R1-208ENST00000578178 ARHGEF35A5YM69 484 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms