RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 PRPF38AQ8NAV1 312 aaKnown RBP6.92□□□□□ -1.3
SF3B3-214ENST00000572365 IL17REQ8NFR9 667 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 CD99L2Q8TCZ2 262 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 ASIC4Q96FT7 647 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 CCDC120Q96HB5 630 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 IPPKQ9H8X2 491 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 DBNDD1Q9H9R9 158 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 PAK6Q9NQU5 681 aaPredicted RBP6.92□□□□□ -1.3
SF3B3-214ENST00000572365 MCM8Q9UJA3 840 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 HEG1Q9ULI3 1381 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 UBR2Q8IWV8 1755 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 NOTOA8MTQ0 251 aa6.91□□□□□ -1.3
SF3B3-214ENST00000572365 CBX4O00257 560 aa6.91□□□□□ -1.3
SF3B3-214ENST00000572365 GSTA4O15217 222 aa6.91□□□□□ -1.3
SF3B3-214ENST00000572365 USP2O75604 605 aaPredicted RBP6.91□□□□□ -1.3
SF3B3-214ENST00000572365 GLRX3O76003 335 aaKnown RBP6.91□□□□□ -1.3
SF3B3-214ENST00000572365 CDK11BP21127 795 aaKnown RBP6.91□□□□□ -1.3
SF3B3-214ENST00000572365 SSTR4P31391 388 aa6.91□□□□□ -1.3
SF3B3-214ENST00000572365 CHRNEQ04844 493 aa6.91□□□□□ -1.3
SF3B3-214ENST00000572365 TNIP1Q15025 636 aa6.91□□□□□ -1.3
SF3B3-214ENST00000572365 SLC4A8Q2Y0W8 1093 aa6.91□□□□□ -1.3
SF3B3-214ENST00000572365 FAM47CQ5HY64 1035 aa6.91□□□□□ -1.3
SF3B3-214ENST00000572365 C16orf59Q7L2K0 433 aa6.91□□□□□ -1.3
SF3B3-214ENST00000572365 PDZD8Q8NEN9 1154 aa6.91□□□□□ -1.3
SF3B3-214ENST00000572365 STAG1Q8WVM7 1258 aa6.91□□□□□ -1.3
SF3B3-214ENST00000572365 FBXW5Q969U6 566 aa6.91□□□□□ -1.3
SF3B3-214ENST00000572365 TMEM169Q96HH4 297 aa6.91□□□□□ -1.3
SF3B3-214ENST00000572365 RBM17Q96I25 401 aaKnown RBP6.91□□□□□ -1.3
SF3B3-214ENST00000572365 MTA3Q9BTC8 594 aa6.91□□□□□ -1.3
SF3B3-214ENST00000572365 TYW1Q9NV66 732 aaKnown RBP6.91□□□□□ -1.3
SF3B3-214ENST00000572365 CLDND1Q9NY35 253 aa6.91□□□□□ -1.3
SF3B3-214ENST00000572365 DDX56Q9NY93 547 aaKnown RBP6.91□□□□□ -1.3
SF3B3-214ENST00000572365 GGA3Q9NZ52 723 aa6.91□□□□□ -1.3
SF3B3-214ENST00000572365 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.91□□□□□ -1.3
SF3B3-214ENST00000572365 PPARGC1AQ9UBK2 798 aaKnown RBP6.91□□□□□ -1.3
SF3B3-214ENST00000572365 COQ6Q9Y2Z9 468 aa6.91□□□□□ -1.3
SF3B3-214ENST00000572365 X6R8D5 127 aa6.91□□□□□ -1.3
SF3B3-214ENST00000572365 RAB11FIP3O75154 756 aa6.9□□□□□ -1.3
SF3B3-214ENST00000572365 SRGAP2CP0DJJ0 459 aa6.9□□□□□ -1.3
SF3B3-214ENST00000572365 CPEP16870 476 aa6.9□□□□□ -1.3
SF3B3-214ENST00000572365 IL13P35225 146 aa6.9□□□□□ -1.3
SF3B3-214ENST00000572365 CDKN1CP49918 316 aaPredicted RBP6.9□□□□□ -1.3
SF3B3-214ENST00000572365 MECP2P51608 486 aaKnown RBP6.9□□□□□ -1.3
SF3B3-214ENST00000572365 NR0B2Q15466 257 aa6.9□□□□□ -1.3
SF3B3-214ENST00000572365 HSF5Q4G112 596 aaPredicted RBP6.9□□□□□ -1.3
SF3B3-214ENST00000572365 TMEM177Q53S58 311 aa6.9□□□□□ -1.3
SF3B3-214ENST00000572365 SUSD4Q5VX71 490 aa6.9□□□□□ -1.3
SF3B3-214ENST00000572365 DPP8Q6V1X1 898 aaPredicted RBP6.9□□□□□ -1.3
SF3B3-214ENST00000572365 CEP128Q6ZU80 1094 aa6.9□□□□□ -1.3
SF3B3-214ENST00000572365 CEP68Q76N32 757 aa6.9□□□□□ -1.3
SF3B3-214ENST00000572365 SPPL2CQ8IUH8 684 aa6.9□□□□□ -1.3
SF3B3-214ENST00000572365 FLCNQ8NFG4 579 aa6.9□□□□□ -1.3
SF3B3-214ENST00000572365 PLEKHO2Q8TD55 490 aa6.9□□□□□ -1.3
SF3B3-214ENST00000572365 PANK1Q8TE04 598 aa6.9□□□□□ -1.3
SF3B3-214ENST00000572365 CHAMP1Q96JM3 812 aa6.9□□□□□ -1.3
SF3B3-214ENST00000572365 GULP1Q9UBP9 304 aa6.9□□□□□ -1.3
SF3B3-214ENST00000572365 ANGEL1Q9UNK9 670 aaKnown RBP6.9□□□□□ -1.3
SF3B3-214ENST00000572365 PTPN22Q9Y2R2 807 aa6.9□□□□□ -1.3
SF3B3-214ENST00000572365 CCDC66A2RUB6 948 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 FITM1A5D6W6 292 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 M0R2C6 588 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 NRDCO43847 1150 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 F2P00734 622 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 PMLP29590 882 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 TM4SF4P48230 202 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 TEFQ10587 303 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 STRN3Q13033 797 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 CRY2Q49AN0 593 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 WWC2Q6AWC2 1192 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 GALNT18Q6P9A2 607 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 CLEC4GQ6UXB4 293 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 TTLL7Q6ZT98 887 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 OVCH1Q7RTY7 1134 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 OXR1Q8N573 874 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 TRMT2BQ96GJ1 504 aaKnown RBP6.89□□□□□ -1.31
SF3B3-214ENST00000572365 FMNL2Q96PY5 1086 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 TEX13AQ9BXU3 409 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-214ENST00000572365 SP110Q9HB58 689 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 PRDM7Q9NQW5 492 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 C19orf73Q9NVV2 129 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 MIS18AQ9NYP9 233 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 MARCH2Q9P0N8 246 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 ACSL6Q9UKU0 697 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 ZNF652Q9Y2D9 606 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 ATP6V0A2Q9Y487 856 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 TAF6LQ9Y6J9 622 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 SCN9AQ15858 1988 aa6.89□□□□□ -1.31
SF3B3-214ENST00000572365 ZSWIM8A7E2V4 1837 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 MRC1P22897 1456 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 BTBD11A6QL63 1104 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 C22orf46C9J442 243 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 BRINP1O60477 761 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 PYGMP11217 842 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 BPIP17213 487 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 FPR2P25090 351 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 GDNFP39905 211 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 SCNN1BP51168 640 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 HK2P52789 917 aa6.88□□□□□ -1.31
SF3B3-214ENST00000572365 LACTBP83111 547 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-214ENST00000572365 DSG1Q02413 1049 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms