RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 IFT122Q9HBG6 1241 aa6.15□□□□□ -1.42
LINC00560-201ENST00000564593 PNMA8BQ9ULN7 279 aaPredicted RBP6.15□□□□□ -1.42
LINC00560-201ENST00000564593 SYNPO2Q9UMS6 1093 aa6.15□□□□□ -1.42
LINC00560-201ENST00000564593 IRAK3Q9Y616 596 aa6.15□□□□□ -1.42
LINC00560-201ENST00000564593 PMF1-BGLAPU3KQ54 211 aa6.15□□□□□ -1.42
LINC00560-201ENST00000564593 ETV2O00321 342 aaPredicted RBP6.14□□□□□ -1.43
LINC00560-201ENST00000564593 CELA3BP08861 270 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 ATF3P18847 181 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 VCAM1P19320 739 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 C5AR1P21730 350 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 XPAP23025 273 aaPredicted RBP6.14□□□□□ -1.43
LINC00560-201ENST00000564593 CFPP27918 469 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 ADCY8P40145 1251 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 CCT2P78371 535 aaKnown RBP6.14□□□□□ -1.43
LINC00560-201ENST00000564593 TCIRG1Q13488 830 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 DGKDQ16760 1214 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 OTOP2Q7RTS6 562 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 BMP8AQ7Z5Y6 402 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 SLC41A1Q8IVJ1 513 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 PPM1NQ8N819 430 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 OR5AN1Q8NGI8 311 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 TSPEARQ8WU66 669 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 ACE2Q9BYF1 805 aaPredicted RBP6.14□□□□□ -1.43
LINC00560-201ENST00000564593 GEMIN8Q9NWZ8 242 aaKnown RBP6.14□□□□□ -1.43
LINC00560-201ENST00000564593 MAGEL2Q9UJ55 1249 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 CDY2AQ9Y6F7 541 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 GOLGA6CA6NDK9 693 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 GOLGA6BA6NDN3 693 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 B8ZZF3 427 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 H0Y858 1186 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 PRPF3O43395 683 aaKnown RBP6.14□□□□□ -1.43
LINC00560-201ENST00000564593 CUTAO60888 179 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 NDUFS2O75306 463 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 MAFO75444 373 aaPredicted RBP6.14□□□□□ -1.43
LINC00560-201ENST00000564593 ZRANB2O95218 330 aaKnown RBP eCLIP6.14□□□□□ -1.43
LINC00560-201ENST00000564593 KNG1P01042 644 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 PLA2G1BP04054 148 aaKnown RBP6.14□□□□□ -1.43
LINC00560-201ENST00000564593 CHGBP05060 677 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 GOLGA6DP0CG33 693 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 U2AF1L5P0DN76 240 aaPredicted RBP6.14□□□□□ -1.43
LINC00560-201ENST00000564593 CYP2C19P33261 490 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 RAP1GAPP47736 663 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 GPR15P49685 360 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 U2AF1Q01081 240 aaKnown RBP eCLIP6.14□□□□□ -1.43
LINC00560-201ENST00000564593 MBNL2Q5VZF2 373 aaKnown RBP6.14□□□□□ -1.43
LINC00560-201ENST00000564593 CXorf57Q6NSI4 855 aaKnown RBP6.14□□□□□ -1.43
LINC00560-201ENST00000564593 TRMT10BQ6PF06 316 aaKnown RBP6.14□□□□□ -1.43
LINC00560-201ENST00000564593 SYDE1Q6ZW31 735 aaPredicted RBP6.14□□□□□ -1.43
LINC00560-201ENST00000564593 C1QL4Q86Z23 238 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 MAGEB6Q8N7X4 407 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 ZSCAN18Q8TBC5 510 aaPredicted RBP6.14□□□□□ -1.43
LINC00560-201ENST00000564593 NUP88Q99567 741 aaPredicted RBP6.14□□□□□ -1.43
LINC00560-201ENST00000564593 GOLGA6AQ9NYA3 693 aa6.14□□□□□ -1.43
LINC00560-201ENST00000564593 GLDCP23378 1020 aa6.13□□□□□ -1.43
LINC00560-201ENST00000564593 IL13P35225 146 aa6.13□□□□□ -1.43
LINC00560-201ENST00000564593 MLLT6P55198 1093 aaPredicted RBP6.13□□□□□ -1.43
LINC00560-201ENST00000564593 ANTXR2P58335 489 aa6.13□□□□□ -1.43
LINC00560-201ENST00000564593 CCDC178Q5BJE1 867 aa6.13□□□□□ -1.43
LINC00560-201ENST00000564593 LCNL1Q6ZST4 164 aa6.13□□□□□ -1.43
LINC00560-201ENST00000564593 SIAH1Q8IUQ4 282 aa6.13□□□□□ -1.43
LINC00560-201ENST00000564593 MIER2Q8N344 545 aa6.13□□□□□ -1.43
LINC00560-201ENST00000564593 TTC8Q8TAM2 541 aa6.13□□□□□ -1.43
LINC00560-201ENST00000564593 FNIP1Q8TF40 1166 aa6.13□□□□□ -1.43
LINC00560-201ENST00000564593 DYDC2Q96IM9 177 aa6.13□□□□□ -1.43
LINC00560-201ENST00000564593 CSRNP2Q9H175 543 aa6.13□□□□□ -1.43
LINC00560-201ENST00000564593 SAE1Q9UBE0 346 aaPredicted RBP6.13□□□□□ -1.43
LINC00560-201ENST00000564593 EVLQ9UI08 416 aaPredicted RBP6.13□□□□□ -1.43
LINC00560-201ENST00000564593 FBXO10Q9UK96 956 aa6.13□□□□□ -1.43
LINC00560-201ENST00000564593 A0A0G2JNJ9 132 aa6.12□□□□□ -1.43
LINC00560-201ENST00000564593 KIF3BO15066 747 aa6.12□□□□□ -1.43
LINC00560-201ENST00000564593 NRP2O60462 931 aa6.12□□□□□ -1.43
LINC00560-201ENST00000564593 ADKP55263 362 aaKnown RBP6.12□□□□□ -1.43
LINC00560-201ENST00000564593 KIF23Q02241 960 aaPredicted RBP6.12□□□□□ -1.43
LINC00560-201ENST00000564593 ANO4Q32M45 955 aa6.12□□□□□ -1.43
LINC00560-201ENST00000564593 CNKSR3Q6P9H4 555 aa6.12□□□□□ -1.43
LINC00560-201ENST00000564593 GAREM2Q75VX8 874 aa6.12□□□□□ -1.43
LINC00560-201ENST00000564593 FAM129CQ86XR2 697 aa6.12□□□□□ -1.43
LINC00560-201ENST00000564593 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.12□□□□□ -1.43
LINC00560-201ENST00000564593 FATE1Q969F0 183 aa6.12□□□□□ -1.43
LINC00560-201ENST00000564593 RELTQ969Z4 430 aa6.12□□□□□ -1.43
LINC00560-201ENST00000564593 PWWP2AQ96N64 755 aa6.12□□□□□ -1.43
LINC00560-201ENST00000564593 SPATA6Q9NWH7 488 aaPredicted RBP6.12□□□□□ -1.43
LINC00560-201ENST00000564593 Q9UFV3 132 aa6.12□□□□□ -1.43
LINC00560-201ENST00000564593 TUBD1Q9UJT1 453 aa6.12□□□□□ -1.43
LINC00560-201ENST00000564593 CDC42EP3Q9UKI2 254 aa6.12□□□□□ -1.43
LINC00560-201ENST00000564593 ZBTB21Q9ULJ3 1066 aa6.12□□□□□ -1.43
LINC00560-201ENST00000564593 PRC1O43663 620 aa6.11□□□□□ -1.43
LINC00560-201ENST00000564593 TSPAN15O95858 294 aa6.11□□□□□ -1.43
LINC00560-201ENST00000564593 COL6A1P12109 1028 aa6.11□□□□□ -1.43
LINC00560-201ENST00000564593 NRG3P56975 720 aa6.11□□□□□ -1.43
LINC00560-201ENST00000564593 GTF2H3Q13889 308 aa6.11□□□□□ -1.43
LINC00560-201ENST00000564593 SSPNQ14714 243 aa6.11□□□□□ -1.43
LINC00560-201ENST00000564593 GFOD2Q3B7J2 385 aa6.11□□□□□ -1.43
LINC00560-201ENST00000564593 RRP12Q5JTH9 1297 aaKnown RBP6.11□□□□□ -1.43
LINC00560-201ENST00000564593 PRR31Q5SQ13 230 aa6.11□□□□□ -1.43
LINC00560-201ENST00000564593 TMEM200BQ69YZ2 307 aa6.11□□□□□ -1.43
LINC00560-201ENST00000564593 THEMISQ8N1K5 641 aaPredicted RBP6.11□□□□□ -1.43
LINC00560-201ENST00000564593 ZCCHC14Q8WYQ9 949 aaKnown RBP6.11□□□□□ -1.43
LINC00560-201ENST00000564593 CLIP3Q96DZ5 547 aa6.11□□□□□ -1.43
LINC00560-201ENST00000564593 LRGUKQ96M69 825 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms