RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 ACAP3Q96P50 834 aa6.54□□□□□ -1.36
USP8-218ENST00000561330 C12orf65Q9H3J6 166 aaKnown RBP6.54□□□□□ -1.36
USP8-218ENST00000561330 VTA1Q9NP79 307 aa6.54□□□□□ -1.36
USP8-218ENST00000561330 PUF60Q9UHX1 559 aaKnown RBP6.54□□□□□ -1.36
USP8-218ENST00000561330 LOC105371045A0A1W2PR82 267 aa6.53□□□□□ -1.36
USP8-218ENST00000561330 ANKRD62A6NC57 917 aa6.53□□□□□ -1.36
USP8-218ENST00000561330 GOLGA8AA7E2F4 631 aa6.53□□□□□ -1.36
USP8-218ENST00000561330 GOLGA8BA8MQT2 603 aa6.53□□□□□ -1.36
USP8-218ENST00000561330 DAPK3O43293 454 aa6.53□□□□□ -1.36
USP8-218ENST00000561330 CELA3BP08861 270 aa6.53□□□□□ -1.36
USP8-218ENST00000561330 AMPD3Q01432 767 aa6.53□□□□□ -1.36
USP8-218ENST00000561330 HGFACQ04756 655 aa6.53□□□□□ -1.36
USP8-218ENST00000561330 CT83Q5H943 113 aa6.53□□□□□ -1.36
USP8-218ENST00000561330 GIMAP8Q8ND71 665 aaPredicted RBP6.53□□□□□ -1.36
USP8-218ENST00000561330 ZCRB1Q8TBF4 217 aaKnown RBP6.53□□□□□ -1.36
USP8-218ENST00000561330 COG1Q8WTW3 980 aa6.53□□□□□ -1.36
USP8-218ENST00000561330 GAB3Q8WWW8 586 aa6.53□□□□□ -1.36
USP8-218ENST00000561330 AHCYL2Q96HN2 611 aaKnown RBP6.53□□□□□ -1.36
USP8-218ENST00000561330 RBM15Q96T37 977 aaKnown RBP eCLIP6.53□□□□□ -1.36
USP8-218ENST00000561330 OSBPL6Q9BZF3 934 aa6.53□□□□□ -1.36
USP8-218ENST00000561330 MEGF9Q9H1U4 602 aa6.53□□□□□ -1.36
USP8-218ENST00000561330 OAZ3Q9UMX2 235 aa6.53□□□□□ -1.36
USP8-218ENST00000561330 COL4A3BPQ9Y5P4 624 aa6.53□□□□□ -1.36
USP8-218ENST00000561330 RBM8AQ9Y5S9 174 aaKnown RBP6.53□□□□□ -1.36
USP8-218ENST00000561330 K7ESM1 405 aa6.52□□□□□ -1.37
USP8-218ENST00000561330 NRP2O60462 931 aa6.52□□□□□ -1.37
USP8-218ENST00000561330 PRKD3O94806 890 aa6.52□□□□□ -1.37
USP8-218ENST00000561330 FSBPO95073 299 aa6.52□□□□□ -1.37
USP8-218ENST00000561330 HNRNPLP14866 589 aaKnown RBP eCLIP6.52□□□□□ -1.37
USP8-218ENST00000561330 CR2P20023 1033 aa6.52□□□□□ -1.37
USP8-218ENST00000561330 XPAP23025 273 aaPredicted RBP6.52□□□□□ -1.37
USP8-218ENST00000561330 GPR15P49685 360 aa6.52□□□□□ -1.37
USP8-218ENST00000561330 SCAND1P57086 179 aa6.52□□□□□ -1.37
USP8-218ENST00000561330 PPARAQ07869 468 aa6.52□□□□□ -1.37
USP8-218ENST00000561330 FSCN1Q16658 493 aaKnown RBP6.52□□□□□ -1.37
USP8-218ENST00000561330 UGT8Q16880 541 aa6.52□□□□□ -1.37
USP8-218ENST00000561330 CLEC14AQ86T13 490 aa6.52□□□□□ -1.37
USP8-218ENST00000561330 TAX1BP1Q86VP1 789 aa6.52□□□□□ -1.37
USP8-218ENST00000561330 SLC7A6OSQ96CW6 309 aaPredicted RBP6.52□□□□□ -1.37
USP8-218ENST00000561330 GNRHR2Q96P88 292 aa6.52□□□□□ -1.37
USP8-218ENST00000561330 DPYSL5Q9BPU6 564 aa6.52□□□□□ -1.37
USP8-218ENST00000561330 SLC5A4Q9NY91 659 aa6.52□□□□□ -1.37
USP8-218ENST00000561330 CNOT11Q9UKZ1 510 aaKnown RBP6.52□□□□□ -1.37
USP8-218ENST00000561330 TMPRSS11EQ9UL52 423 aa6.52□□□□□ -1.37
USP8-218ENST00000561330 PHLDB1Q86UU1 1377 aa6.52□□□□□ -1.37
USP8-218ENST00000561330 SHROOM4Q9ULL8 1493 aa6.52□□□□□ -1.37
USP8-218ENST00000561330 A0A0A6YYK5 440 aaPredicted RBP6.51□□□□□ -1.37
USP8-218ENST00000561330 C2orf78A6NCI8 922 aa6.51□□□□□ -1.37
USP8-218ENST00000561330 MATN2O00339 956 aa6.51□□□□□ -1.37
USP8-218ENST00000561330 CDC14BO60729 498 aa6.51□□□□□ -1.37
USP8-218ENST00000561330 CDK11BP21127 795 aaKnown RBP6.51□□□□□ -1.37
USP8-218ENST00000561330 ENPP1P22413 925 aa6.51□□□□□ -1.37
USP8-218ENST00000561330 ATP2C1P98194 919 aaPredicted RBP6.51□□□□□ -1.37
USP8-218ENST00000561330 CCDC178Q5BJE1 867 aa6.51□□□□□ -1.37
USP8-218ENST00000561330 PITRM1Q5JRX3 1037 aa6.51□□□□□ -1.37
USP8-218ENST00000561330 NECAB2Q7Z6G3 386 aa6.51□□□□□ -1.37
USP8-218ENST00000561330 CFHR4Q92496 578 aa6.51□□□□□ -1.37
USP8-218ENST00000561330 EAF2Q96CJ1 260 aaPredicted RBP6.51□□□□□ -1.37
USP8-218ENST00000561330 SOX7Q9BT81 388 aa6.51□□□□□ -1.37
USP8-218ENST00000561330 SSBP3Q9BWW4 388 aaPredicted RBP6.51□□□□□ -1.37
USP8-218ENST00000561330 MSL2Q9HCI7 577 aa6.51□□□□□ -1.37
USP8-218ENST00000561330 PCDH12Q9NPG4 1184 aa6.51□□□□□ -1.37
USP8-218ENST00000561330 C14orf119Q9NWQ9 140 aa6.51□□□□□ -1.37
USP8-218ENST00000561330 PRSS50Q9UI38 385 aa6.51□□□□□ -1.37
USP8-218ENST00000561330 GPR42O15529 346 aa6.5□□□□□ -1.37
USP8-218ENST00000561330 LPLP06858 475 aa6.5□□□□□ -1.37
USP8-218ENST00000561330 ADCY7P51828 1080 aa6.5□□□□□ -1.37
USP8-218ENST00000561330 NRG3P56975 720 aa6.5□□□□□ -1.37
USP8-218ENST00000561330 BPIFB4P59827 614 aa6.5□□□□□ -1.37
USP8-218ENST00000561330 TCIRG1Q13488 830 aa6.5□□□□□ -1.37
USP8-218ENST00000561330 PTPROQ16827 1216 aa6.5□□□□□ -1.37
USP8-218ENST00000561330 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.5□□□□□ -1.37
USP8-218ENST00000561330 LYSMD2Q8IV50 215 aa6.5□□□□□ -1.37
USP8-218ENST00000561330 PLA2G15Q8NCC3 412 aa6.5□□□□□ -1.37
USP8-218ENST00000561330 OR14C36Q8NHC7 312 aa6.5□□□□□ -1.37
USP8-218ENST00000561330 PPP1R14CQ8TAE6 165 aa6.5□□□□□ -1.37
USP8-218ENST00000561330 LMBR1Q8WVP7 490 aa6.5□□□□□ -1.37
USP8-218ENST00000561330 RAX2Q96IS3 184 aa6.5□□□□□ -1.37
USP8-218ENST00000561330 LOXL4Q96JB6 756 aa6.5□□□□□ -1.37
USP8-218ENST00000561330 SAMD11Q96NU1 681 aa6.5□□□□□ -1.37
USP8-218ENST00000561330 UIMC1Q96RL1 719 aa6.5□□□□□ -1.37
USP8-218ENST00000561330 PUS7LQ9H0K6 701 aaKnown RBP6.5□□□□□ -1.37
USP8-218ENST00000561330 SLC6A15Q9H2J7 730 aa6.5□□□□□ -1.37
USP8-218ENST00000561330 KCTD10Q9H3F6 313 aa6.5□□□□□ -1.37
USP8-218ENST00000561330 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.5□□□□□ -1.37
USP8-218ENST00000561330 PMS2P1A4D2B8 440 aa6.49□□□□□ -1.37
USP8-218ENST00000561330 SLC26A4O43511 780 aa6.49□□□□□ -1.37
USP8-218ENST00000561330 SEC24DO94855 1032 aaPredicted RBP6.49□□□□□ -1.37
USP8-218ENST00000561330 IBSPP21815 317 aaPredicted RBP6.49□□□□□ -1.37
USP8-218ENST00000561330 CDKN1CP49918 316 aaPredicted RBP6.49□□□□□ -1.37
USP8-218ENST00000561330 LGALS4P56470 323 aa6.49□□□□□ -1.37
USP8-218ENST00000561330 SPIDRQ14159 915 aa6.49□□□□□ -1.37
USP8-218ENST00000561330 TRIM25Q14258 630 aaKnown RBP6.49□□□□□ -1.37
USP8-218ENST00000561330 LCE4AQ5TA78 99 aa6.49□□□□□ -1.37
USP8-218ENST00000561330 TCTN3Q6NUS6 607 aa6.49□□□□□ -1.37
USP8-218ENST00000561330 LMBR1LQ6UX01 489 aa6.49□□□□□ -1.37
USP8-218ENST00000561330 GAREM2Q75VX8 874 aa6.49□□□□□ -1.37
USP8-218ENST00000561330 GLB1L2Q8IW92 636 aa6.49□□□□□ -1.37
USP8-218ENST00000561330 CMIPQ8IY22 773 aa6.49□□□□□ -1.37
USP8-218ENST00000561330 PRPF38AQ8NAV1 312 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms