RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 TMX1Q9H3N1 280 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 ERVK-5Q9HDB9 667 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 SLC4A7Q9Y6M7 1214 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 TRIOBPQ9H2D6 2365 aa13.25□□□□□ -0.29
RABGGTA-218ENST00000560777 LAMA2P24043 3122 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-218ENST00000560777 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.25□□□□□ -0.29
RABGGTA-218ENST00000560777 ZBBXA8MT70 800 aa13.25□□□□□ -0.29
RABGGTA-218ENST00000560777 ENPP3O14638 875 aa13.25□□□□□ -0.29
RABGGTA-218ENST00000560777 FGFR4P22455 802 aa13.25□□□□□ -0.29
RABGGTA-218ENST00000560777 WDR5P61964 334 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-218ENST00000560777 CAPSQ13938 189 aa13.25□□□□□ -0.29
RABGGTA-218ENST00000560777 MCM6Q14566 821 aa13.25□□□□□ -0.29
RABGGTA-218ENST00000560777 RESP18Q5W5W9 173 aa13.25□□□□□ -0.29
RABGGTA-218ENST00000560777 FAM109BQ6ICB4 259 aaPredicted RBP13.25□□□□□ -0.29
RABGGTA-218ENST00000560777 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.25□□□□□ -0.29
RABGGTA-218ENST00000560777 DAW1Q8N136 415 aa13.25□□□□□ -0.29
RABGGTA-218ENST00000560777 MTIF3Q9H2K0 278 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-218ENST00000560777 MINDY3Q9H8M7 445 aa13.25□□□□□ -0.29
RABGGTA-218ENST00000560777 GDPD2Q9HCC8 539 aa13.25□□□□□ -0.29
RABGGTA-218ENST00000560777 CHMP5Q9NZZ3 219 aa13.25□□□□□ -0.29
RABGGTA-218ENST00000560777 LAMA3Q16787 3333 aa13.25□□□□□ -0.29
RABGGTA-218ENST00000560777 NPHP3-ACAD11A0A0J9YXS1 232 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 GRXCR1A8MXD5 290 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 MGEA5O60502 916 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 EFCAB14O75071 495 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 HIP1RO75146 1068 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 GUCY2CP25092 1073 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 PTENP60484 403 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 MAPK7Q13164 816 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 TFDP1Q14186 410 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 DHX8Q14562 1220 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 ODR4Q5SWX8 454 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 ADALQ6DHV7 355 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 CCDC73Q6ZRK6 1079 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 SRGAP1Q7Z6B7 1085 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 IFNLR1Q8IU57 520 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 PDILTQ8N807 584 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 PHOSPHO2Q8TCD6 241 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 BSNDQ8WZ55 320 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 LARP4BQ92615 738 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 KIFAP3Q92845 792 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 IPO9Q96P70 1041 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 FTHL17Q9BXU8 183 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 INO80BQ9C086 356 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 KCND2Q9NZV8 630 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 STK17AQ9UEE5 414 aa13.24□□□□□ -0.29
RABGGTA-218ENST00000560777 SFI1A8K8P3 1242 aa13.23□□□□□ -0.29
RABGGTA-218ENST00000560777 ATP2A2P16615 1042 aaKnown RBP13.23□□□□□ -0.29
RABGGTA-218ENST00000560777 CMA1P23946 247 aa13.23□□□□□ -0.29
RABGGTA-218ENST00000560777 KCNJ6P48051 423 aa13.23□□□□□ -0.29
RABGGTA-218ENST00000560777 DEFB103AP81534 67 aa13.23□□□□□ -0.29
RABGGTA-218ENST00000560777 RAD51AP2Q09MP3 1159 aa13.23□□□□□ -0.29
RABGGTA-218ENST00000560777 DSC3Q14574 896 aa13.23□□□□□ -0.29
RABGGTA-218ENST00000560777 E2F4Q16254 413 aa13.23□□□□□ -0.29
RABGGTA-218ENST00000560777 FAM43BQ6ZT52 329 aaPredicted RBP13.23□□□□□ -0.29
RABGGTA-218ENST00000560777 TMCO2Q7Z6W1 182 aaPredicted RBP13.23□□□□□ -0.29
RABGGTA-218ENST00000560777 GPBP1Q86WP2 473 aa13.23□□□□□ -0.29
RABGGTA-218ENST00000560777 LINC01599Q8WXQ3 324 aa13.23□□□□□ -0.29
RABGGTA-218ENST00000560777 TIPINQ9BVW5 301 aa13.23□□□□□ -0.29
RABGGTA-218ENST00000560777 NFKBIZQ9BYH8 718 aa13.23□□□□□ -0.29
RABGGTA-218ENST00000560777 TSPYL2Q9H2G4 693 aaPredicted RBP13.23□□□□□ -0.29
RABGGTA-218ENST00000560777 SOX1O00570 391 aaPredicted RBP13.22□□□□□ -0.29
RABGGTA-218ENST00000560777 AMHP03971 560 aa13.22□□□□□ -0.29
RABGGTA-218ENST00000560777 SFPQP23246 707 aaKnown RBP eCLIP13.22□□□□□ -0.29
RABGGTA-218ENST00000560777 STAT6P42226 847 aa13.22□□□□□ -0.29
RABGGTA-218ENST00000560777 NAMPTP43490 491 aa13.22□□□□□ -0.29
RABGGTA-218ENST00000560777 PHKA2P46019 1235 aa13.22□□□□□ -0.29
RABGGTA-218ENST00000560777 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
RABGGTA-218ENST00000560777 GIT2Q14161 759 aa13.22□□□□□ -0.29
RABGGTA-218ENST00000560777 SV2BQ7L1I2 683 aa13.22□□□□□ -0.29
RABGGTA-218ENST00000560777 CRIPAKQ8N1N5 446 aa13.22□□□□□ -0.29
RABGGTA-218ENST00000560777 TOP1MTQ969P6 601 aa13.22□□□□□ -0.29
RABGGTA-218ENST00000560777 DRC1Q96MC2 740 aa13.22□□□□□ -0.29
RABGGTA-218ENST00000560777 SLC9A7Q96T83 725 aa13.22□□□□□ -0.29
RABGGTA-218ENST00000560777 ADAM2Q99965 735 aa13.22□□□□□ -0.29
RABGGTA-218ENST00000560777 NTPCRQ9BSD7 190 aaKnown RBP13.22□□□□□ -0.29
RABGGTA-218ENST00000560777 RGS18Q9NS28 235 aa13.22□□□□□ -0.29
RABGGTA-218ENST00000560777 FAM13BQ9NYF5 915 aa13.22□□□□□ -0.29
RABGGTA-218ENST00000560777 KCNH3Q9ULD8 1083 aa13.22□□□□□ -0.29
RABGGTA-218ENST00000560777 A0A1B0GVL5 298 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 MYMKA6NI61 221 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 LRRIQ4A6NIV6 560 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 INO80B-WBP1J3KQ70 363 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 POLR2DO15514 142 aaKnown RBP13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 HOXA11P31270 313 aaPredicted RBP13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 NPTX2P47972 431 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 RABGGTBP53611 331 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 PEX3P56589 373 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 FAM189BP81408 668 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 SMAD3P84022 425 aaKnown RBP13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 MBTD1Q05BQ5 628 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 PPP2R5AQ15172 486 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 AMHR2Q16671 573 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 CDCA2Q69YH5 1023 aaPredicted RBP13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 CATSPER4Q7RTX7 472 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 HERC6Q8IVU3 1022 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 MYOCDQ8IZQ8 938 aa13.21□□□□□ -0.29
RABGGTA-218ENST00000560777 IQUBQ8NA54 791 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms