RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 GPRC5CQ9NQ84 441 aa13.45□□□□□ -0.26
USP8-212ENST00000560730 RGS18Q9NS28 235 aa13.45□□□□□ -0.26
USP8-212ENST00000560730 CHD7Q9P2D1 2997 aa13.45□□□□□ -0.26
USP8-212ENST00000560730 INSL6Q9Y581 213 aa13.45□□□□□ -0.26
USP8-212ENST00000560730 FNDC1Q4ZHG4 1894 aaPredicted RBP13.45□□□□□ -0.26
USP8-212ENST00000560730 DENND3A2RUS2 1198 aa13.44□□□□□ -0.26
USP8-212ENST00000560730 ARHGEF35A5YM69 484 aa13.44□□□□□ -0.26
USP8-212ENST00000560730 RFXAPO00287 272 aa13.44□□□□□ -0.26
USP8-212ENST00000560730 BMP15O95972 392 aa13.44□□□□□ -0.26
USP8-212ENST00000560730 MARCKSP29966 332 aaPredicted RBP13.44□□□□□ -0.26
USP8-212ENST00000560730 GATMP50440 423 aa13.44□□□□□ -0.26
USP8-212ENST00000560730 GRB10Q13322 594 aa13.44□□□□□ -0.26
USP8-212ENST00000560730 PADI6Q6TGC4 694 aa13.44□□□□□ -0.26
USP8-212ENST00000560730 RNF149Q8NC42 400 aa13.44□□□□□ -0.26
USP8-212ENST00000560730 SP7Q8TDD2 431 aaPredicted RBP13.44□□□□□ -0.26
USP8-212ENST00000560730 USP28Q96RU2 1077 aa13.44□□□□□ -0.26
USP8-212ENST00000560730 YME1L1Q96TA2 773 aa13.44□□□□□ -0.26
USP8-212ENST00000560730 POLR3FQ9H1D9 316 aaPredicted RBP13.44□□□□□ -0.26
USP8-212ENST00000560730 ZSCAN16Q9H4T2 348 aaPredicted RBP13.44□□□□□ -0.26
USP8-212ENST00000560730 PRRC2BQ5JSZ5 2229 aaKnown RBP13.43□□□□□ -0.26
USP8-212ENST00000560730 ASAP2O43150 1006 aa13.43□□□□□ -0.26
USP8-212ENST00000560730 DGKIO75912 1065 aa13.43□□□□□ -0.26
USP8-212ENST00000560730 CYP11B2P19099 503 aa13.43□□□□□ -0.26
USP8-212ENST00000560730 GLRA2P23416 452 aa13.43□□□□□ -0.26
USP8-212ENST00000560730 SARSP49591 514 aaKnown RBP13.43□□□□□ -0.26
USP8-212ENST00000560730 FAM189BP81408 668 aa13.43□□□□□ -0.26
USP8-212ENST00000560730 CAPSQ13938 189 aa13.43□□□□□ -0.26
USP8-212ENST00000560730 ADGRE1Q14246 886 aa13.43□□□□□ -0.26
USP8-212ENST00000560730 HYIQ5T013 277 aa13.43□□□□□ -0.26
USP8-212ENST00000560730 SLC24A5Q71RS6 500 aa13.43□□□□□ -0.26
USP8-212ENST00000560730 NPAS4Q8IUM7 802 aa13.43□□□□□ -0.26
USP8-212ENST00000560730 BSNDQ8WZ55 320 aa13.43□□□□□ -0.26
USP8-212ENST00000560730 ZNF689Q96CS4 500 aaPredicted RBP13.43□□□□□ -0.26
USP8-212ENST00000560730 RC3H2Q9HBD1 1191 aaKnown RBP13.43□□□□□ -0.26
USP8-212ENST00000560730 TFIP11Q9UBB9 837 aaKnown RBP13.43□□□□□ -0.26
USP8-212ENST00000560730 DNM3Q9UQ16 869 aa13.43□□□□□ -0.26
USP8-212ENST00000560730 STK24Q9Y6E0 443 aa13.43□□□□□ -0.26
USP8-212ENST00000560730 MYH11P35749 1972 aa13.43□□□□□ -0.26
USP8-212ENST00000560730 MYO7AQ13402 2215 aa13.43□□□□□ -0.26
USP8-212ENST00000560730 EYA4O95677 639 aa13.42□□□□□ -0.26
USP8-212ENST00000560730 ZSCAN22P10073 491 aaPredicted RBP13.42□□□□□ -0.26
USP8-212ENST00000560730 PTENP60484 403 aa13.42□□□□□ -0.26
USP8-212ENST00000560730 MXD4Q14582 209 aaPredicted RBP13.42□□□□□ -0.26
USP8-212ENST00000560730 SPECC1Q5M775 1068 aa13.42□□□□□ -0.26
USP8-212ENST00000560730 FAM102BQ5T8I3 360 aa13.42□□□□□ -0.26
USP8-212ENST00000560730 USP49Q70CQ1 688 aa13.42□□□□□ -0.26
USP8-212ENST00000560730 CATSPER4Q7RTX7 472 aa13.42□□□□□ -0.26
USP8-212ENST00000560730 CABP7Q86V35 215 aa13.42□□□□□ -0.26
USP8-212ENST00000560730 LRRC15Q8TF66 581 aa13.42□□□□□ -0.26
USP8-212ENST00000560730 ARNTL2Q8WYA1 636 aa13.42□□□□□ -0.26
USP8-212ENST00000560730 CLIC6Q96NY7 704 aa13.42□□□□□ -0.26
USP8-212ENST00000560730 C17orf80Q9BSJ5 609 aa13.42□□□□□ -0.26
USP8-212ENST00000560730 INO80BQ9C086 356 aaPredicted RBP13.42□□□□□ -0.26
USP8-212ENST00000560730 C1orf112Q9NSG2 853 aa13.42□□□□□ -0.26
USP8-212ENST00000560730 FBXO2Q9UK22 296 aaPredicted RBP13.42□□□□□ -0.26
USP8-212ENST00000560730 MTUS1Q9ULD2 1270 aa13.42□□□□□ -0.26
USP8-212ENST00000560730 STXBP5LQ9Y2K9 1186 aa13.42□□□□□ -0.26
USP8-212ENST00000560730 KIAA1671Q9BY89 1806 aa13.42□□□□□ -0.26
USP8-212ENST00000560730 F13A1P00488 732 aa13.41□□□□□ -0.26
USP8-212ENST00000560730 STAG3L1P0CL83 205 aa13.41□□□□□ -0.26
USP8-212ENST00000560730 ZSCAN20P17040 1043 aaPredicted RBP13.41□□□□□ -0.26
USP8-212ENST00000560730 SFPQP23246 707 aaKnown RBP eCLIP13.41□□□□□ -0.26
USP8-212ENST00000560730 LONP1P36776 959 aaKnown RBP13.41□□□□□ -0.26
USP8-212ENST00000560730 ERVK-21P61565 698 aa13.41□□□□□ -0.26
USP8-212ENST00000560730 SLC39A14Q15043 492 aa13.41□□□□□ -0.26
USP8-212ENST00000560730 FOXD4L6Q3SYB3 417 aaPredicted RBP13.41□□□□□ -0.26
USP8-212ENST00000560730 TMEM119Q4V9L6 283 aa13.41□□□□□ -0.26
USP8-212ENST00000560730 FOXD4L3Q6VB84 417 aaPredicted RBP13.41□□□□□ -0.26
USP8-212ENST00000560730 SRGAP1Q7Z6B7 1085 aa13.41□□□□□ -0.26
USP8-212ENST00000560730 MCPH1Q8NEM0 835 aa13.41□□□□□ -0.26
USP8-212ENST00000560730 AK8Q96MA6 479 aa13.41□□□□□ -0.26
USP8-212ENST00000560730 TGS1Q96RS0 853 aaKnown RBP13.41□□□□□ -0.26
USP8-212ENST00000560730 RUSC1Q9BVN2 902 aa13.41□□□□□ -0.26
USP8-212ENST00000560730 CSRNP2Q9H175 543 aa13.41□□□□□ -0.26
USP8-212ENST00000560730 RNF19AQ9NV58 838 aa13.41□□□□□ -0.26
USP8-212ENST00000560730 LRFN2Q9ULH4 789 aa13.41□□□□□ -0.26
USP8-212ENST00000560730 PCDHB7Q9Y5E2 793 aa13.41□□□□□ -0.26
USP8-212ENST00000560730 COL4A4P53420 1690 aaPredicted RBP13.41□□□□□ -0.26
USP8-212ENST00000560730 CDH23Q9H251 3354 aa13.41□□□□□ -0.26
USP8-212ENST00000560730 ADGRA3Q8IWK6 1321 aa13.41□□□□□ -0.26
USP8-212ENST00000560730 TCHHQ07283 1943 aa13.41□□□□□ -0.26
USP8-212ENST00000560730 RALGAPA2Q2PPJ7 1873 aa13.4□□□□□ -0.26
USP8-212ENST00000560730 LINC00271P0C7V0 271 aa13.4□□□□□ -0.26
USP8-212ENST00000560730 FGFR1P11362 822 aa13.4□□□□□ -0.26
USP8-212ENST00000560730 HOXA11P31270 313 aaPredicted RBP13.4□□□□□ -0.26
USP8-212ENST00000560730 PHKA2P46019 1235 aa13.4□□□□□ -0.26
USP8-212ENST00000560730 NASPP49321 788 aaPredicted RBP13.4□□□□□ -0.26
USP8-212ENST00000560730 POU5F1BQ06416 359 aa13.4□□□□□ -0.26
USP8-212ENST00000560730 TFDP1Q14186 410 aa13.4□□□□□ -0.26
USP8-212ENST00000560730 KARSQ15046 597 aaKnown RBP13.4□□□□□ -0.26
USP8-212ENST00000560730 PAN2Q504Q3 1202 aaKnown RBP13.4□□□□□ -0.26
USP8-212ENST00000560730 RINT1Q6NUQ1 792 aa13.4□□□□□ -0.26
USP8-212ENST00000560730 FAM43BQ6ZT52 329 aaPredicted RBP13.4□□□□□ -0.26
USP8-212ENST00000560730 C1orf186Q6ZWK4 172 aa13.4□□□□□ -0.26
USP8-212ENST00000560730 ECHDC2Q86YB7 292 aa13.4□□□□□ -0.26
USP8-212ENST00000560730 IFNLR1Q8IU57 520 aaPredicted RBP13.4□□□□□ -0.26
USP8-212ENST00000560730 EPSTI1Q96J88 318 aa13.4□□□□□ -0.26
USP8-212ENST00000560730 CHST12Q9NRB3 414 aa13.4□□□□□ -0.26
USP8-212ENST00000560730 PIN4Q9Y237 131 aaKnown RBP13.4□□□□□ -0.26
USP8-212ENST00000560730 ZDHHC9Q9Y397 364 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms