RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 DHTKD1Q96HY7 919 aaPredicted RBP18.26■□□□□ 0.51
TPM1-219ENST00000559397 REEP2Q9BRK0 252 aa18.26■□□□□ 0.51
TPM1-219ENST00000559397 TIPINQ9BVW5 301 aa18.26■□□□□ 0.51
TPM1-219ENST00000559397 POLD4Q9HCU8 107 aa18.26■□□□□ 0.51
TPM1-219ENST00000559397 GPRC5CQ9NQ84 441 aa18.26■□□□□ 0.51
TPM1-219ENST00000559397 TRMT13Q9NUP7 481 aaKnown RBP18.26■□□□□ 0.51
TPM1-219ENST00000559397 IFNKQ9P0W0 207 aa18.26■□□□□ 0.51
TPM1-219ENST00000559397 SMIM35A0A1B0GVV1 85 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 FRMD3A2A2Y4 597 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 RSPH10B2B2RC85 870 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 GAS2O43903 313 aaKnown RBP18.25■□□□□ 0.51
TPM1-219ENST00000559397 B4GALT4O60513 344 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 PTMAP06454 111 aaKnown RBP18.25■□□□□ 0.51
TPM1-219ENST00000559397 RSPH10BP0C881 870 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 ARL2P36404 184 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 STX17P56962 302 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 CACNB1Q02641 598 aaPredicted RBP18.25■□□□□ 0.51
TPM1-219ENST00000559397 RAD51AP2Q09MP3 1159 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 MAPK7Q13164 816 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 STIM1Q13586 685 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 RUFY4Q6ZNE9 571 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 FAM126BQ8IXS8 530 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 METTL13Q8N6R0 699 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 RETREG2Q8NC44 543 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 KIAA0895Q8NCT3 520 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 TMEM143Q96AN5 459 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 XPO4Q9C0E2 1151 aaKnown RBP18.25■□□□□ 0.51
TPM1-219ENST00000559397 SUGCTQ9HAC7 445 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 SAMSN1Q9NSI8 373 aaKnown RBP18.25■□□□□ 0.51
TPM1-219ENST00000559397 HIP1RO75146 1068 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 CD4P01730 458 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 CYP2C9P11712 490 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 CLCN3P51790 818 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 PTGISQ16647 500 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 SERINC5Q86VE9 423 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 KIAA0319LQ8IZA0 1049 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 TRPV6Q9H1D0 765 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 ODF2LQ9ULJ1 636 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 MAPK8IP1Q9UQF2 711 aa18.25■□□□□ 0.51
TPM1-219ENST00000559397 GOLGA6L6A8MZA4 724 aa18.24■□□□□ 0.51
TPM1-219ENST00000559397 PSMA7O14818 248 aa18.24■□□□□ 0.51
TPM1-219ENST00000559397 KRT18P05783 430 aaKnown RBP18.24■□□□□ 0.51
TPM1-219ENST00000559397 FAM102BQ5T8I3 360 aa18.24■□□□□ 0.51
TPM1-219ENST00000559397 IER5Q5VY09 327 aa18.24■□□□□ 0.51
TPM1-219ENST00000559397 ANKRD33Q7Z3H0 272 aa18.24■□□□□ 0.51
TPM1-219ENST00000559397 TNS4Q8IZW8 715 aa18.24■□□□□ 0.51
TPM1-219ENST00000559397 SPC24Q8NBT2 197 aa18.24■□□□□ 0.51
TPM1-219ENST00000559397 WNT8BQ93098 351 aa18.24■□□□□ 0.51
TPM1-219ENST00000559397 MYH11P35749 1972 aa18.24■□□□□ 0.51
TPM1-219ENST00000559397 MROH7Q68CQ1 1323 aa18.23■□□□□ 0.51
TPM1-219ENST00000559397 CBFA2T2O43439 604 aa18.23■□□□□ 0.51
TPM1-219ENST00000559397 TMOD1P28289 359 aa18.23■□□□□ 0.51
TPM1-219ENST00000559397 ZNF131P52739 623 aa18.23■□□□□ 0.51
TPM1-219ENST00000559397 COASYQ13057 564 aa18.23■□□□□ 0.51
TPM1-219ENST00000559397 TAF2Q6P1X5 1199 aa18.23■□□□□ 0.51
TPM1-219ENST00000559397 APTXQ7Z2E3 356 aaKnown RBP18.23■□□□□ 0.51
TPM1-219ENST00000559397 CCDC65Q8IXS2 484 aa18.23■□□□□ 0.51
TPM1-219ENST00000559397 TCP11Q8WWU5 503 aa18.23■□□□□ 0.51
TPM1-219ENST00000559397 KIFAP3Q92845 792 aa18.23■□□□□ 0.51
TPM1-219ENST00000559397 HPS3Q969F9 1004 aa18.23■□□□□ 0.51
TPM1-219ENST00000559397 POLR3FQ9H1D9 316 aaPredicted RBP18.23■□□□□ 0.51
TPM1-219ENST00000559397 PANK4Q9NVE7 773 aa18.23■□□□□ 0.51
TPM1-219ENST00000559397 SUCLA2Q9P2R7 463 aaPredicted RBP18.23■□□□□ 0.51
TPM1-219ENST00000559397 SFI1A8K8P3 1242 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 TPM3P06753 285 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 IDEP14735 1019 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 CCNE1P24864 410 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 UBASH3AP57075 661 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 RTP1P59025 263 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 PTK7Q13308 1070 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 LRRC26Q2I0M4 334 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 TRIM60Q495X7 471 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 TTI2Q6NXR4 508 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 RPAINQ86UA6 219 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 GUF1Q8N442 669 aaKnown RBP18.22■□□□□ 0.51
TPM1-219ENST00000559397 DNAJB3Q8WWF6 145 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 DHX38Q92620 1227 aaKnown RBP18.22■□□□□ 0.51
TPM1-219ENST00000559397 DRC1Q96MC2 740 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 TOX2Q96NM4 488 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 SLC39A2Q9NP94 309 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 CCDC85CA6NKD9 419 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 PQBP1O60828 265 aaKnown RBP18.22■□□□□ 0.51
TPM1-219ENST00000559397 SERPINC1P01008 464 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 GLRA2P23416 452 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 DNM2P50570 870 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 PMS1P54277 932 aaKnown RBP18.22■□□□□ 0.51
TPM1-219ENST00000559397 FOXR2Q6PJQ5 311 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 ZSCAN30Q86W11 494 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 DRC7Q8IY82 874 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 ASAP3Q8TDY4 903 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 PRPF31Q8WWY3 499 aaKnown RBP18.22■□□□□ 0.51
TPM1-219ENST00000559397 PSPC1Q8WXF1 523 aaKnown RBP18.22■□□□□ 0.51
TPM1-219ENST00000559397 BSNDQ8WZ55 320 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 P2RX5Q93086 422 aa18.22■□□□□ 0.51
TPM1-219ENST00000559397 NAP1L5Q96NT1 182 aaPredicted RBP18.22■□□□□ 0.51
TPM1-219ENST00000559397 FAM49AQ9H0Q0 323 aaPredicted RBP18.22■□□□□ 0.51
TPM1-219ENST00000559397 FAM13AO94988 1023 aa18.21■□□□□ 0.51
TPM1-219ENST00000559397 CDK11BP21127 795 aaKnown RBP18.21■□□□□ 0.51
TPM1-219ENST00000559397 TLE2Q04725 743 aa18.21■□□□□ 0.51
TPM1-219ENST00000559397 TRIM71Q2Q1W2 868 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms