RNA–Protein interactions for RNA: ENST00000556247.1

LRP1-210, Transcript of LDL receptor related protein 1, human

TSL 3

Gene LRP1, Length 611 nt, Biotype retained intron, Subcellular localisation Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRP1-210	ENST00000556247	EDRF1	Q3B7T1	1238 aa		18.85	■□□□□ 0.61
LRP1-210	ENST00000556247	FILIP1L	Q4L180	1135 aa		18.85	■□□□□ 0.61
LRP1-210	ENST00000556247	TCP11X2	Q5H9J9	407 aa		18.85	■□□□□ 0.61
LRP1-210	ENST00000556247	EFCAB12	Q6NXP0	572 aa		18.85	■□□□□ 0.61
LRP1-210	ENST00000556247	HS2ST1	Q7LGA3	356 aa		18.85	■□□□□ 0.61
LRP1-210	ENST00000556247	KSR1	Q8IVT5	923 aa		18.85	■□□□□ 0.61
LRP1-210	ENST00000556247	DRC7	Q8IY82	874 aa		18.85	■□□□□ 0.61
LRP1-210	ENST00000556247	SLAIN1	Q8ND83	568 aa		18.85	■□□□□ 0.61
LRP1-210	ENST00000556247	ASAP3	Q8TDY4	903 aa		18.85	■□□□□ 0.61
LRP1-210	ENST00000556247	MRFAP1L1	Q96HT8	127 aa		18.85	■□□□□ 0.61
LRP1-210	ENST00000556247	PDLIM2	Q96JY6	352 aa		18.85	■□□□□ 0.61
LRP1-210	ENST00000556247	CEP63	Q96MT8	703 aa		18.85	■□□□□ 0.61
LRP1-210	ENST00000556247	XPO4	Q9C0E2	1151 aa	Known RBP	18.85	■□□□□ 0.61
LRP1-210	ENST00000556247	UPF3A	Q9H1J1	476 aa	Known RBP	18.85	■□□□□ 0.61
LRP1-210	ENST00000556247	LIMA1	Q9UHB6	759 aa	Known RBP	18.85	■□□□□ 0.61
LRP1-210	ENST00000556247	EXOC7	Q9UPT5	735 aa		18.85	■□□□□ 0.61
LRP1-210	ENST00000556247	CETN3	O15182	167 aa		18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	F2	P00734	622 aa		18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	SCP2	P22307	547 aa		18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	GLRA2	P23416	452 aa		18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	RPL13	P26373	211 aa	Known RBP	18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	IRX5	P78411	483 aa	Predicted RBP	18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	KCNA1	Q09470	495 aa		18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	ADAM9	Q13443	819 aa		18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	MXD4	Q14582	209 aa	Predicted RBP	18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	MFSD10	Q14728	455 aa		18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	KIAA0753	Q2KHM9	967 aa		18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	GNAS	Q5JWF2	1037 aa		18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	IRF2BP1	Q8IU81	584 aa		18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	LRRC71	Q8N4P6	559 aa		18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	METTL13	Q8N6R0	699 aa		18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	TMEM161B	Q8NDZ6	487 aa		18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	DEPTOR	Q8TB45	409 aa		18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	GOLGA5	Q8TBA6	731 aa		18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	PRPF31	Q8WWY3	499 aa	Known RBP	18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	PSPC1	Q8WXF1	523 aa	Known RBP	18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	KATNAL1	Q9BW62	490 aa		18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	GBP3	Q9H0R5	595 aa		18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	SUCLA2	Q9P2R7	463 aa	Predicted RBP	18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	TRIM17	Q9Y577	477 aa		18.84	■□□□□ 0.61
LRP1-210	ENST00000556247	DENND3	A2RUS2	1198 aa		18.83	■□□□□ 0.6
LRP1-210	ENST00000556247	LRRIQ4	A6NIV6	560 aa		18.83	■□□□□ 0.6
LRP1-210	ENST00000556247	ASAP2	O43150	1006 aa		18.83	■□□□□ 0.6
LRP1-210	ENST00000556247	C22orf31	O95567	290 aa		18.83	■□□□□ 0.6
LRP1-210	ENST00000556247	TPM2	P07951	284 aa		18.83	■□□□□ 0.6
LRP1-210	ENST00000556247	CDC25B	P30305	580 aa		18.83	■□□□□ 0.6
LRP1-210	ENST00000556247	MTIF2	P46199	727 aa	Known RBP	18.83	■□□□□ 0.6
LRP1-210	ENST00000556247	GRIK4	Q16099	956 aa		18.83	■□□□□ 0.6
LRP1-210	ENST00000556247	MAP3K21	Q5TCX8	1036 aa		18.83	■□□□□ 0.6
LRP1-210	ENST00000556247	FILIP1	Q7Z7B0	1213 aa		18.83	■□□□□ 0.6
LRP1-210	ENST00000556247	KAT2B	Q92831	832 aa		18.83	■□□□□ 0.6
LRP1-210	ENST00000556247	CNOT6L	Q96LI5	555 aa	Known RBP	18.83	■□□□□ 0.6
LRP1-210	ENST00000556247	KIFC3	Q9BVG8	833 aa		18.83	■□□□□ 0.6
LRP1-210	ENST00000556247	XPNPEP3	Q9NQH7	507 aa		18.83	■□□□□ 0.6
LRP1-210	ENST00000556247	WBP1L	Q9NX94	342 aa		18.83	■□□□□ 0.6
LRP1-210	ENST00000556247	TBX20	Q9UMR3	447 aa		18.83	■□□□□ 0.6
LRP1-210	ENST00000556247	TGFB1I1	O43294	461 aa		18.82	■□□□□ 0.6
LRP1-210	ENST00000556247	GNA14	O95837	355 aa		18.82	■□□□□ 0.6
LRP1-210	ENST00000556247	PGK1	P00558	417 aa		18.82	■□□□□ 0.6
LRP1-210	ENST00000556247	NR3C1	P04150	777 aa		18.82	■□□□□ 0.6
LRP1-210	ENST00000556247	TMOD1	P28289	359 aa		18.82	■□□□□ 0.6
LRP1-210	ENST00000556247	GRK4	P32298	578 aa		18.82	■□□□□ 0.6
LRP1-210	ENST00000556247	COPB1	P53618	953 aa	Known RBP	18.82	■□□□□ 0.6
LRP1-210	ENST00000556247	NKX3-2	P78367	333 aa		18.82	■□□□□ 0.6
LRP1-210	ENST00000556247	LAMTOR4	Q0VGL1	99 aa		18.82	■□□□□ 0.6
LRP1-210	ENST00000556247	MKRN4P	Q13434	485 aa	Predicted RBP	18.82	■□□□□ 0.6
LRP1-210	ENST00000556247	KRT31	Q15323	416 aa		18.82	■□□□□ 0.6
LRP1-210	ENST00000556247	MTHFD1L	Q6UB35	978 aa		18.82	■□□□□ 0.6
LRP1-210	ENST00000556247	LRRC55	Q6ZSA7	311 aa		18.82	■□□□□ 0.6
LRP1-210	ENST00000556247	EEF2KMT	Q96G04	330 aa		18.82	■□□□□ 0.6
LRP1-210	ENST00000556247	NAP1L5	Q96NT1	182 aa	Predicted RBP	18.82	■□□□□ 0.6
LRP1-210	ENST00000556247	MTG1	Q9BT17	334 aa	Predicted RBP	18.82	■□□□□ 0.6
LRP1-210	ENST00000556247	CGN	Q9P2M7	1197 aa	Known RBP	18.82	■□□□□ 0.6
LRP1-210	ENST00000556247	ZMYM2	Q9UBW7	1377 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	MYADML2	A6NDP7	307 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	LRRC10B	A6NIK2	292 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	HAS3	O00219	553 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	CLIC2	O15247	247 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	INHA	P05111	366 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	SMIM10L2A	P0DMW4	78 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	SMIM10L2B	P0DMW5	78 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	NR2F2	P24468	414 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	CLCN3	P51790	818 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	SNRPF	P62306	86 aa	Known RBP	18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	PURA	Q00577	322 aa	Known RBP	18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	STRN3	Q13033	797 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	DRP2	Q13474	957 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	CAPS	Q13938	189 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	TFDP1	Q14186	410 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	NFIL3	Q16649	462 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	CCDC40	Q4G0X9	1142 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	ZC3H3	Q8IXZ2	948 aa	Known RBP	18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	VPS16	Q9H269	839 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	AGPAT3	Q9NRZ7	376 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	SETD4	Q9NVD3	440 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	TAB2	Q9NYJ8	693 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	ARHGAP28	Q9P2N2	729 aa		18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	DDX20	Q9UHI6	824 aa	Known RBP	18.81	■□□□□ 0.6
LRP1-210	ENST00000556247	PTCH2	Q9Y6C5	1203 aa		18.81	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms