RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 WNT7AO00755 349 aa19.23■□□□□ 0.67
GPHN-211ENST00000556020 HOXA2O43364 376 aa19.23■□□□□ 0.67
GPHN-211ENST00000556020 NCK2O43639 380 aa19.23■□□□□ 0.67
GPHN-211ENST00000556020 FGF18O76093 207 aa19.23■□□□□ 0.67
GPHN-211ENST00000556020 SFPQP23246 707 aaKnown RBP eCLIP19.23■□□□□ 0.674e-7■□□□□ 9.9
GPHN-211ENST00000556020 YWHABP31946 246 aaKnown RBP19.23■□□□□ 0.67
GPHN-211ENST00000556020 SSTR3P32745 418 aaPredicted RBP19.23■□□□□ 0.67
GPHN-211ENST00000556020 LTBRP36941 435 aa19.23■□□□□ 0.67
GPHN-211ENST00000556020 DLX2Q07687 328 aaPredicted RBP19.23■□□□□ 0.67
GPHN-211ENST00000556020 COL19A1Q14993 1142 aa19.23■□□□□ 0.67
GPHN-211ENST00000556020 CALCRLQ16602 461 aa19.23■□□□□ 0.67
GPHN-211ENST00000556020 XKR9Q5GH70 373 aa19.23■□□□□ 0.67
GPHN-211ENST00000556020 ZNF410Q86VK4 478 aa19.23■□□□□ 0.67
GPHN-211ENST00000556020 TPH2Q8IWU9 490 aa19.23■□□□□ 0.67
GPHN-211ENST00000556020 HELQQ8TDG4 1101 aa19.23■□□□□ 0.67
GPHN-211ENST00000556020 PPP2R3CQ969Q6 453 aa19.23■□□□□ 0.67
GPHN-211ENST00000556020 CASD1Q96PB1 797 aa19.23■□□□□ 0.67
GPHN-211ENST00000556020 CWH43Q9H720 699 aa19.23■□□□□ 0.67
GPHN-211ENST00000556020 CD320Q9NPF0 282 aa19.23■□□□□ 0.67
GPHN-211ENST00000556020 DACT1Q9NYF0 836 aa19.23■□□□□ 0.67
GPHN-211ENST00000556020 PIN4Q9Y237 131 aaKnown RBP19.23■□□□□ 0.67
GPHN-211ENST00000556020 ZBTB39O15060 712 aa19.22■□□□□ 0.67
GPHN-211ENST00000556020 LAG3P18627 525 aa19.22■□□□□ 0.67
GPHN-211ENST00000556020 PBX3P40426 434 aa19.22■□□□□ 0.67
GPHN-211ENST00000556020 TXKP42681 527 aa19.22■□□□□ 0.67
GPHN-211ENST00000556020 NRIP1P48552 1158 aa19.22■□□□□ 0.67
GPHN-211ENST00000556020 SPIRE1Q08AE8 756 aa19.22■□□□□ 0.67
GPHN-211ENST00000556020 PUS10Q3MIT2 529 aaKnown RBP19.22■□□□□ 0.67
GPHN-211ENST00000556020 LONRF3Q496Y0 759 aa19.22■□□□□ 0.67
GPHN-211ENST00000556020 CLLU1OSQ5K130 101 aa19.22■□□□□ 0.67
GPHN-211ENST00000556020 TWF2Q6IBS0 349 aaKnown RBP19.22■□□□□ 0.67
GPHN-211ENST00000556020 LRRC55Q6ZSA7 311 aa19.22■□□□□ 0.67
GPHN-211ENST00000556020 CATSPER4Q7RTX7 472 aa19.22■□□□□ 0.67
GPHN-211ENST00000556020 FAM178BQ8IXR5 827 aa19.22■□□□□ 0.67
GPHN-211ENST00000556020 C4orf19Q8IY42 314 aa19.22■□□□□ 0.67
GPHN-211ENST00000556020 LRRC43Q8N309 656 aa19.22■□□□□ 0.67
GPHN-211ENST00000556020 ZSWIM4Q9H7M6 989 aa19.22■□□□□ 0.67
GPHN-211ENST00000556020 PCDHA12Q9UN75 941 aa19.22■□□□□ 0.67
GPHN-211ENST00000556020 COL4A3BPQ9Y5P4 624 aa19.22■□□□□ 0.67
GPHN-211ENST00000556020 A0A0U1RQF3 1178 aa19.21■□□□□ 0.67
GPHN-211ENST00000556020 NEMFO60524 1076 aa19.21■□□□□ 0.67
GPHN-211ENST00000556020 TBX10O75333 385 aa19.21■□□□□ 0.67
GPHN-211ENST00000556020 SRGAP2CP0DJJ0 459 aa19.21■□□□□ 0.67
GPHN-211ENST00000556020 RFC5P40937 340 aa19.21■□□□□ 0.67
GPHN-211ENST00000556020 NDUFV1P49821 464 aa19.21■□□□□ 0.67
GPHN-211ENST00000556020 EMC2Q15006 297 aa19.21■□□□□ 0.67
GPHN-211ENST00000556020 SAFBQ15424 915 aaKnown RBP eCLIP19.21■□□□□ 0.67
GPHN-211ENST00000556020 CTC1Q2NKJ3 1217 aa19.21■□□□□ 0.67
GPHN-211ENST00000556020 OTUD6AQ7L8S5 288 aa19.21■□□□□ 0.67
GPHN-211ENST00000556020 PRPF31Q8WWY3 499 aaKnown RBP19.21■□□□□ 0.67
GPHN-211ENST00000556020 INO80BQ9C086 356 aaPredicted RBP19.21■□□□□ 0.67
GPHN-211ENST00000556020 EPHX3Q9H6B9 360 aa19.21■□□□□ 0.67
GPHN-211ENST00000556020 TTC12Q9H892 705 aaPredicted RBP19.21■□□□□ 0.67
GPHN-211ENST00000556020 TLR9Q9NR96 1032 aa19.21■□□□□ 0.67
GPHN-211ENST00000556020 ATF7P17544 494 aaPredicted RBP19.2■□□□□ 0.66
GPHN-211ENST00000556020 CSPP1Q1MSJ5 1256 aa19.2■□□□□ 0.66
GPHN-211ENST00000556020 ZNF598Q86UK7 904 aaKnown RBP19.2■□□□□ 0.66
GPHN-211ENST00000556020 GJD3Q8N144 294 aa19.2■□□□□ 0.66
GPHN-211ENST00000556020 PSPC1Q8WXF1 523 aaKnown RBP19.2■□□□□ 0.66
GPHN-211ENST00000556020 KHSRPQ92945 711 aaKnown RBP eCLIP19.2■□□□□ 0.66
GPHN-211ENST00000556020 LPPQ93052 612 aa19.2■□□□□ 0.66
GPHN-211ENST00000556020 C8orf76Q96K31 380 aa19.2■□□□□ 0.66
GPHN-211ENST00000556020 ZNF558Q96NG5 402 aa19.2■□□□□ 0.66
GPHN-211ENST00000556020 EIF2AK1Q9BQI3 630 aaKnown RBP19.2■□□□□ 0.66
GPHN-211ENST00000556020 DHX33Q9H6R0 707 aaKnown RBP19.2■□□□□ 0.66
GPHN-211ENST00000556020 TLE6Q9H808 572 aa19.2■□□□□ 0.66
GPHN-211ENST00000556020 CHST12Q9NRB3 414 aa19.2■□□□□ 0.66
GPHN-211ENST00000556020 FAM50BQ9Y247 325 aa19.2■□□□□ 0.66
GPHN-211ENST00000556020 PER2O15055 1255 aa19.19■□□□□ 0.66
GPHN-211ENST00000556020 SLITRK3O94933 977 aa19.19■□□□□ 0.66
GPHN-211ENST00000556020 EOMESO95936 686 aa19.19■□□□□ 0.66
GPHN-211ENST00000556020 MCM7P33993 719 aa19.19■□□□□ 0.66
GPHN-211ENST00000556020 PHKA2P46019 1235 aa19.19■□□□□ 0.66
GPHN-211ENST00000556020 ERVFC1P60507 584 aa19.19■□□□□ 0.66
GPHN-211ENST00000556020 UBE3AQ05086 875 aa19.19■□□□□ 0.66
GPHN-211ENST00000556020 LAMTOR4Q0VGL1 99 aa19.19■□□□□ 0.66
GPHN-211ENST00000556020 ADAM15Q13444 863 aa19.19■□□□□ 0.66
GPHN-211ENST00000556020 C8orf34Q49A92 452 aa19.19■□□□□ 0.66
GPHN-211ENST00000556020 KCNT2Q6UVM3 1135 aa19.19■□□□□ 0.66
GPHN-211ENST00000556020 EXOC8Q8IYI6 725 aa19.19■□□□□ 0.66
GPHN-211ENST00000556020 CCDC43Q96MW1 224 aaKnown RBP19.19■□□□□ 0.66
GPHN-211ENST00000556020 IFT122Q9HBG6 1241 aa19.19■□□□□ 0.66
GPHN-211ENST00000556020 PPME1Q9Y570 386 aa19.19■□□□□ 0.66
GPHN-211ENST00000556020 POTEMA6NI47 508 aa19.18■□□□□ 0.66
GPHN-211ENST00000556020 PLPP4Q5VZY2 271 aa19.18■□□□□ 0.66
GPHN-211ENST00000556020 EFHBQ8N7U6 833 aa19.18■□□□□ 0.66
GPHN-211ENST00000556020 TCP11Q8WWU5 503 aa19.18■□□□□ 0.66
GPHN-211ENST00000556020 MTRQ99707 1265 aa19.18■□□□□ 0.66
GPHN-211ENST00000556020 C1QTNF1Q9BXJ1 281 aa19.18■□□□□ 0.66
GPHN-211ENST00000556020 TMEM60Q9H2L4 133 aa19.18■□□□□ 0.66
GPHN-211ENST00000556020 ENTPD7Q9NQZ7 604 aa19.18■□□□□ 0.66
GPHN-211ENST00000556020 CD207Q9UJ71 328 aa19.18■□□□□ 0.66
GPHN-211ENST00000556020 INPP5FQ9Y2H2 1132 aa19.18■□□□□ 0.66
GPHN-211ENST00000556020 A0A087WWV3 80 aa19.17■□□□□ 0.66
GPHN-211ENST00000556020 MBTPS2O43462 519 aa19.17■□□□□ 0.66
GPHN-211ENST00000556020 COL9A1P20849 921 aa19.17■□□□□ 0.66
GPHN-211ENST00000556020 RBM10P98175 930 aaKnown RBP19.17■□□□□ 0.66
GPHN-211ENST00000556020 GNL2Q13823 731 aaKnown RBP19.17■□□□□ 0.66
GPHN-211ENST00000556020 RNF149Q8NC42 400 aa19.17■□□□□ 0.66
GPHN-211ENST00000556020 MRPS27Q92552 414 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms