RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 SPATA33Q96N06 139 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 ABHD10Q9NUJ1 306 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 SLC5A4Q9NY91 659 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 ARMCX3Q9UH62 379 aaPredicted RBP10.23□□□□□ -0.77
GNE-206ENST00000543356 CPA4Q9UI42 421 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.23□□□□□ -0.77
GNE-206ENST00000543356 H0YCG3 227 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 AKAP3O75969 853 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 POLGP54098 1239 aaPredicted RBP10.23□□□□□ -0.77
GNE-206ENST00000543356 ARHGAP1Q07960 439 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 IRF5Q13568 498 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 HSDL1Q3SXM5 330 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 MORN1Q5T089 497 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 TRMT1LQ7Z2T5 733 aaKnown RBP10.23□□□□□ -0.77
GNE-206ENST00000543356 KSR1Q8IVT5 923 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 SYCP3Q8IZU3 236 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 ZNF710Q8N1W2 664 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 TMEM161BQ8NDZ6 487 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 POLR3FQ9H1D9 316 aaPredicted RBP10.23□□□□□ -0.77
GNE-206ENST00000543356 PDGFCQ9NRA1 345 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 EXOC7Q9UPT5 735 aa10.23□□□□□ -0.77
GNE-206ENST00000543356 RASSF10A6NK89 507 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 CLIC2O15247 247 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 SLC16A4O15374 487 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 CCP110O43303 1012 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 SNAI1O95863 264 aaPredicted RBP10.22□□□□□ -0.77
GNE-206ENST00000543356 PSMC2P35998 433 aaKnown RBP10.22□□□□□ -0.77
GNE-206ENST00000543356 LAMC2Q13753 1193 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 C17orf99Q6UX52 265 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 MAP4K3Q8IVH8 894 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 CCAR2Q8N163 923 aaKnown RBP10.22□□□□□ -0.77
GNE-206ENST00000543356 CPLX3Q8WVH0 158 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 BSNDQ8WZ55 320 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 BORCS6Q96GS4 357 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 IFT74Q96LB3 600 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 DNAJC7Q99615 494 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 GPBP1L1Q9HC44 474 aaPredicted RBP10.22□□□□□ -0.77
GNE-206ENST00000543356 KMT5AQ9NQR1 393 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 TTC26A0AVF1 554 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 KIF3CO14782 793 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 TLR2O60603 784 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 GH1P01241 217 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 E4F1Q66K89 784 aaPredicted RBP10.22□□□□□ -0.77
GNE-206ENST00000543356 ATP8B4Q8TF62 1192 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 SLC7A3Q8WY07 619 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 TSC1Q92574 1164 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 COPS5Q92905 334 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 TINF2Q9BSI4 451 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 EDEM3Q9BZQ6 932 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 IKZF4Q9H2S9 585 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 SMARCAD1Q9H4L7 1026 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 TBX20Q9UMR3 447 aa10.22□□□□□ -0.77
GNE-206ENST00000543356 LUC7L2Q9Y383 392 aaKnown RBP10.22□□□□□ -0.77
GNE-206ENST00000543356 CCDC169A6NNP5 214 aa10.21□□□□□ -0.77
GNE-206ENST00000543356 RNF225M0QZC1 329 aaPredicted RBP10.21□□□□□ -0.77
GNE-206ENST00000543356 GAS2O43903 313 aaKnown RBP10.21□□□□□ -0.77
GNE-206ENST00000543356 MAFO75444 373 aaPredicted RBP10.21□□□□□ -0.77
GNE-206ENST00000543356 AFPP02771 609 aaKnown RBP10.21□□□□□ -0.77
GNE-206ENST00000543356 MYCNP04198 464 aaPredicted RBP10.21□□□□□ -0.77
GNE-206ENST00000543356 XRCC5P13010 732 aaKnown RBP10.21□□□□□ -0.77
GNE-206ENST00000543356 TRIM21P19474 475 aaKnown RBP10.21□□□□□ -0.77
GNE-206ENST00000543356 KRT9P35527 623 aa10.21□□□□□ -0.77
GNE-206ENST00000543356 ARL2P36404 184 aa10.21□□□□□ -0.77
GNE-206ENST00000543356 CASP4P49662 377 aa10.21□□□□□ -0.77
GNE-206ENST00000543356 KLK7P49862 253 aa10.21□□□□□ -0.77
GNE-206ENST00000543356 ZBED6P86452 979 aa10.21□□□□□ -0.77
GNE-206ENST00000543356 MAP2K5Q13163 448 aa10.21□□□□□ -0.77
GNE-206ENST00000543356 EXOC8Q8IYI6 725 aa10.21□□□□□ -0.77
GNE-206ENST00000543356 FAM186BQ8IYM0 893 aa10.21□□□□□ -0.77
GNE-206ENST00000543356 NPLOC4Q8TAT6 608 aa10.21□□□□□ -0.77
GNE-206ENST00000543356 PCMTD1Q96MG8 357 aaPredicted RBP10.21□□□□□ -0.77
GNE-206ENST00000543356 ABHD16BQ9H3Z7 469 aa10.21□□□□□ -0.77
GNE-206ENST00000543356 ZFYVE28Q9HCC9 887 aa10.21□□□□□ -0.77
GNE-206ENST00000543356 MAPK13O15264 365 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 HOXC6P09630 235 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 SOX10P56693 466 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 KCNH2Q12809 1159 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 PLCB4Q15147 1175 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 PPP2R5AQ15172 486 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 TMEM63BQ5T3F8 832 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 TMTC1Q8IUR5 882 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 OR8K1Q8NGG5 319 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 PPTC7Q8NI37 304 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 GLG1Q92896 1179 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 ARHGAP28Q9P2N2 729 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 FRMD4BQ9Y2L6 1034 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 ADGRA3Q8IWK6 1321 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 DENND3A2RUS2 1198 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 TMEM88BA6NKF7 163 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 NAMPTP43490 491 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 TM4SF4P48230 202 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 PSEN1P49768 467 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 SLC20A2Q08357 652 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 KCNMA1Q12791 1236 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 USP6NLQ92738 828 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 SLC35C1Q96A29 364 aa10.21□□□□□ -0.78
GNE-206ENST00000543356 ABT1Q9ULW3 272 aaKnown RBP10.21□□□□□ -0.78
GNE-206ENST00000543356 MGAMO43451 1857 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 GTPBP10A4D1E9 387 aaKnown RBP10.2□□□□□ -0.78
GNE-206ENST00000543356 USP27XA6NNY8 438 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms