RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 BTG3Q14201 252 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 DSC3Q14574 896 aa10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 PLA2G4FQ68DD2 849 aa10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 SLC24A5Q71RS6 500 aa10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 NOSTRINQ8IVI9 506 aa10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 MICALL1Q8N3F8 863 aa10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 NEK9Q8TD19 979 aa10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 NLRP7Q8WX94 980 aa10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 SLC7A3Q8WY07 619 aa10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 MARVELD3Q96A59 401 aa10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 ZNF668Q96K58 619 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 SCLT1Q96NL6 688 aa10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 INO80BQ9C086 356 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 TMEM60Q9H2L4 133 aa10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 WRAP73Q9P2S5 460 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 NOL7Q9UMY1 257 aaKnown RBP10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 RWDD3Q9Y3V2 267 aa10.88□□□□□ -0.67
TNFRSF1A-214ENST00000543048 C9IYK1 514 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 H3BNC9 293 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 ZBTB39O15060 712 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 ASAP2O43150 1006 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 CD2BP2O95400 341 aaKnown RBP10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 BMPR1AP36894 532 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 TECP42680 631 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 POLGP54098 1239 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 CYP4A11Q02928 519 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 GPM6BQ13491 265 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 XKR9Q5GH70 373 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 TTC38Q5R3I4 469 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 ZNF410Q86VK4 478 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 RHPN2Q8IUC4 686 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 PLPP6Q8IY26 295 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 CMTR2Q8IYT2 770 aaKnown RBP10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 GDPD5Q8WTR4 605 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 TCP11Q8WWU5 503 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 CLP1Q92989 425 aaKnown RBP10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 DHX33Q9H6R0 707 aaKnown RBP10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 RC3H2Q9HBD1 1191 aaKnown RBP10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 PRDM6Q9NQX0 595 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 TSHZ2Q9NRE2 1034 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 ANKEF1Q9NU02 776 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 COL4A6Q14031 1691 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 NCOR1O75376 2440 aa10.87□□□□□ -0.67
TNFRSF1A-214ENST00000543048 ADGRA3Q8IWK6 1321 aa10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 CUL9Q8IWT3 2517 aa10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 A0A087WZ62 844 aa10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 DLL1O00548 723 aa10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 GAS2O43903 313 aaKnown RBP10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 OR52Z1P0C646 297 aa10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 IBSPP21815 317 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 GJB2P29033 226 aa10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 PTPROQ16827 1216 aa10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 KSR1Q8IVT5 923 aa10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 C4orf32Q8N8J7 132 aa10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 ATXN2LQ8WWM7 1075 aaKnown RBP10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 PRPF31Q8WWY3 499 aaKnown RBP10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 TMEM143Q96AN5 459 aa10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 FDXACB1Q9BRP7 624 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 POLR3CQ9BUI4 534 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 ELAC1Q9H777 363 aaKnown RBP10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 ATP6V0A4Q9HBG4 840 aa10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 TUFT1Q9NNX1 390 aa10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 CHST12Q9NRB3 414 aa10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 TMEM161AQ9NX61 479 aa10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 SMC3Q9UQE7 1217 aa10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 COL4A3BPQ9Y5P4 624 aa10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 SPTBN5Q9NRC6 3674 aaKnown RBP10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 ATG2AQ2TAZ0 1938 aa10.86□□□□□ -0.67
TNFRSF1A-214ENST00000543048 MYH11P35749 1972 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 C5orf67F2Z3F1 127 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 H3BQV1 296 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 CSDE1O75534 798 aaKnown RBP10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 EOMESO95936 686 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 SRGAP2CP0DJJ0 459 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 SPATA31C1P0DKV0 1188 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 FGFR4P22455 802 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 CTNNB1P35222 781 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 TOB1P50616 345 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 MRPS5P82675 430 aaKnown RBP10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 LAMTOR4Q0VGL1 99 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 PDIA5Q14554 519 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 SKIV2LQ15477 1246 aaKnown RBP10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 NAALADL2Q58DX5 795 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 PPP1R15BQ5SWA1 713 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 FAM102BQ5T8I3 360 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 MCTP1Q6DN14 999 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 CATSPER3Q86XQ3 398 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 ERMNQ8TAM6 284 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 PSPC1Q8WXF1 523 aaKnown RBP10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 MRPL38Q96DV4 380 aaKnown RBP10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 NACC1Q96RE7 527 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 PLVAPQ9BX97 442 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 DACT1Q9NYF0 836 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 COG5Q9UP83 839 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 MRPL42Q9Y6G3 142 aaKnown RBP10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 PLXNA4Q9HCM2 1894 aa10.85□□□□□ -0.67
TNFRSF1A-214ENST00000543048 A0A087WWV3 80 aa10.84□□□□□ -0.67
TNFRSF1A-214ENST00000543048 A0A0U1RQF3 1178 aa10.84□□□□□ -0.67
TNFRSF1A-214ENST00000543048 TBKBP1A7MCY6 615 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms