RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 MRPL38Q96DV4 380 aaKnown RBP19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 MTRQ99707 1265 aa19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 PRDM6Q9NQX0 595 aa19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 DBR1Q9UK59 544 aaKnown RBP19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 SMC3Q9UQE7 1217 aa19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 PCDHB6Q9Y5E3 794 aa19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 MRPL42Q9Y6G3 142 aaKnown RBP19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 BRWD1Q9NSI6 2320 aa19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 MUC3AQ02505 3323 aa19.18■□□□□ 0.66
SFSWAP-205ENST00000537164 MED24O75448 989 aa19.17■□□□□ 0.66
SFSWAP-205ENST00000537164 CSDE1O75534 798 aaKnown RBP19.17■□□□□ 0.66
SFSWAP-205ENST00000537164 FGFR4P22455 802 aa19.17■□□□□ 0.66
SFSWAP-205ENST00000537164 PRPHP41219 470 aa19.17■□□□□ 0.66
SFSWAP-205ENST00000537164 POU5F1BQ06416 359 aa19.17■□□□□ 0.66
SFSWAP-205ENST00000537164 PTGDRQ13258 359 aa19.17■□□□□ 0.66
SFSWAP-205ENST00000537164 GPM6BQ13491 265 aa19.17■□□□□ 0.66
SFSWAP-205ENST00000537164 MXD4Q14582 209 aaPredicted RBP19.17■□□□□ 0.66
SFSWAP-205ENST00000537164 NAALADL2Q58DX5 795 aa19.17■□□□□ 0.66
SFSWAP-205ENST00000537164 SRGAP1Q7Z6B7 1085 aa19.17■□□□□ 0.66
SFSWAP-205ENST00000537164 FERMT3Q86UX7 667 aa19.17■□□□□ 0.66
SFSWAP-205ENST00000537164 ECHDC2Q86YB7 292 aa19.17■□□□□ 0.66
SFSWAP-205ENST00000537164 ERMNQ8TAM6 284 aa19.17■□□□□ 0.66
SFSWAP-205ENST00000537164 PIGOQ8TEQ8 1089 aa19.17■□□□□ 0.66
SFSWAP-205ENST00000537164 C11orf84Q9BUA3 381 aaPredicted RBP19.17■□□□□ 0.66
SFSWAP-205ENST00000537164 ATP6V0A4Q9HBG4 840 aa19.17■□□□□ 0.66
SFSWAP-205ENST00000537164 DACT1Q9NYF0 836 aa19.17■□□□□ 0.66
SFSWAP-205ENST00000537164 THEGQ9P2T0 379 aa19.17■□□□□ 0.66
SFSWAP-205ENST00000537164 TTC28Q96AY4 2481 aa19.17■□□□□ 0.66
SFSWAP-205ENST00000537164 EOMESO95936 686 aa19.16■□□□□ 0.66
SFSWAP-205ENST00000537164 CTNNB1P35222 781 aa19.16■□□□□ 0.66
SFSWAP-205ENST00000537164 PCBP1Q15365 356 aaKnown RBP eCLIP19.16■□□□□ 0.66
SFSWAP-205ENST00000537164 PTPROQ16827 1216 aa19.16■□□□□ 0.66
SFSWAP-205ENST00000537164 FAM102BQ5T8I3 360 aa19.16■□□□□ 0.66
SFSWAP-205ENST00000537164 ZNF598Q86UK7 904 aaKnown RBP19.16■□□□□ 0.66
SFSWAP-205ENST00000537164 IFNLR1Q8IU57 520 aaPredicted RBP19.16■□□□□ 0.66
SFSWAP-205ENST00000537164 MICALL1Q8N3F8 863 aa19.16■□□□□ 0.66
SFSWAP-205ENST00000537164 NLRP4Q96MN2 994 aa19.16■□□□□ 0.66
SFSWAP-205ENST00000537164 NACC1Q96RE7 527 aa19.16■□□□□ 0.66
SFSWAP-205ENST00000537164 LMAN2LQ9H0V9 348 aa19.16■□□□□ 0.66
SFSWAP-205ENST00000537164 RNF19AQ9NV58 838 aa19.16■□□□□ 0.66
SFSWAP-205ENST00000537164 BDP1A6H8Y1 2624 aa19.15■□□□□ 0.66
SFSWAP-205ENST00000537164 H3BQV1 296 aa19.15■□□□□ 0.66
SFSWAP-205ENST00000537164 HOXA2O43364 376 aa19.15■□□□□ 0.66
SFSWAP-205ENST00000537164 ARL2P36404 184 aa19.15■□□□□ 0.66
SFSWAP-205ENST00000537164 GATMP50440 423 aa19.15■□□□□ 0.66
SFSWAP-205ENST00000537164 LARP1BQ659C4 914 aaKnown RBP19.15■□□□□ 0.66
SFSWAP-205ENST00000537164 HAUS3Q68CZ6 603 aa19.15■□□□□ 0.66
SFSWAP-205ENST00000537164 MCTP1Q6DN14 999 aa19.15■□□□□ 0.66
SFSWAP-205ENST00000537164 NFKBIZQ9BYH8 718 aa19.15■□□□□ 0.66
SFSWAP-205ENST00000537164 COG5Q9UP83 839 aa19.15■□□□□ 0.66
SFSWAP-205ENST00000537164 GTF3C3Q9Y5Q9 886 aa19.15■□□□□ 0.66
SFSWAP-205ENST00000537164 STK24Q9Y6E0 443 aa19.15■□□□□ 0.66
SFSWAP-205ENST00000537164 PLXNA4Q9HCM2 1894 aa19.14■□□□□ 0.65
SFSWAP-205ENST00000537164 ZNF623O75123 536 aa19.14■□□□□ 0.65
SFSWAP-205ENST00000537164 ATF7P17544 494 aaPredicted RBP19.14■□□□□ 0.65
SFSWAP-205ENST00000537164 PTENP60484 403 aa19.14■□□□□ 0.65
SFSWAP-205ENST00000537164 PAN2Q504Q3 1202 aaKnown RBP19.14■□□□□ 0.65
SFSWAP-205ENST00000537164 RNF149Q8NC42 400 aa19.14■□□□□ 0.65
SFSWAP-205ENST00000537164 RSPH1Q8WYR4 309 aa19.14■□□□□ 0.65
SFSWAP-205ENST00000537164 CASD1Q96PB1 797 aa19.14■□□□□ 0.65
SFSWAP-205ENST00000537164 RAB34Q9BZG1 259 aa19.14■□□□□ 0.65
SFSWAP-205ENST00000537164 TMEM117Q9H0C3 514 aa19.14■□□□□ 0.65
SFSWAP-205ENST00000537164 MINDY3Q9H8M7 445 aa19.14■□□□□ 0.65
SFSWAP-205ENST00000537164 BMP2KQ9NSY1 1161 aaPredicted RBP19.14■□□□□ 0.65
SFSWAP-205ENST00000537164 AGPAT5Q9NUQ2 364 aa19.14■□□□□ 0.65
SFSWAP-205ENST00000537164 LRWD1Q9UFC0 647 aa19.14■□□□□ 0.65
SFSWAP-205ENST00000537164 MYO7AQ13402 2215 aa19.14■□□□□ 0.65
SFSWAP-205ENST00000537164 TBKBP1A7MCY6 615 aa19.13■□□□□ 0.65
SFSWAP-205ENST00000537164 SRGAP2CP0DJJ0 459 aa19.13■□□□□ 0.65
SFSWAP-205ENST00000537164 FGFR1P11362 822 aa19.13■□□□□ 0.65
SFSWAP-205ENST00000537164 PHKA2P46019 1235 aa19.13■□□□□ 0.65
SFSWAP-205ENST00000537164 ATP2C1P98194 919 aaPredicted RBP19.13■□□□□ 0.65
SFSWAP-205ENST00000537164 IL17AQ16552 155 aa19.13■□□□□ 0.65
SFSWAP-205ENST00000537164 TIGD5Q53EQ6 642 aa19.13■□□□□ 0.65
SFSWAP-205ENST00000537164 TJAP1Q5JTD0 557 aa19.13■□□□□ 0.65
SFSWAP-205ENST00000537164 POTEGQ6S5H5 508 aa19.13■□□□□ 0.65
SFSWAP-205ENST00000537164 CATSPER4Q7RTX7 472 aa19.13■□□□□ 0.65
SFSWAP-205ENST00000537164 INTS4Q96HW7 963 aaKnown RBP19.13■□□□□ 0.65
SFSWAP-205ENST00000537164 CCDC43Q96MW1 224 aaKnown RBP19.13■□□□□ 0.65
SFSWAP-205ENST00000537164 PLAGL2Q9UPG8 496 aa19.13■□□□□ 0.65
SFSWAP-205ENST00000537164 NCOR1O75376 2440 aa19.12■□□□□ 0.65
SFSWAP-205ENST00000537164 A0A087WWV3 80 aa19.12■□□□□ 0.65
SFSWAP-205ENST00000537164 GRM6O15303 877 aa19.12■□□□□ 0.65
SFSWAP-205ENST00000537164 SKIP12755 728 aa19.12■□□□□ 0.65
SFSWAP-205ENST00000537164 HOXA11P31270 313 aaPredicted RBP19.12■□□□□ 0.65
SFSWAP-205ENST00000537164 RAB27AP51159 221 aa19.12■□□□□ 0.65
SFSWAP-205ENST00000537164 MRPS5P82675 430 aaKnown RBP19.12■□□□□ 0.65
SFSWAP-205ENST00000537164 CAPSQ13938 189 aa19.12■□□□□ 0.65
SFSWAP-205ENST00000537164 TFDP1Q14186 410 aa19.12■□□□□ 0.65
SFSWAP-205ENST00000537164 COL19A1Q14993 1142 aa19.12■□□□□ 0.65
SFSWAP-205ENST00000537164 ECM1Q16610 540 aa19.12■□□□□ 0.65
SFSWAP-205ENST00000537164 MCPH1Q8NEM0 835 aa19.12■□□□□ 0.65
SFSWAP-205ENST00000537164 ASB2Q96Q27 587 aa19.12■□□□□ 0.65
SFSWAP-205ENST00000537164 CWH43Q9H720 699 aa19.12■□□□□ 0.65
SFSWAP-205ENST00000537164 TYW1Q9NV66 732 aaKnown RBP19.12■□□□□ 0.65
SFSWAP-205ENST00000537164 PIN4Q9Y237 131 aaKnown RBP19.12■□□□□ 0.65
SFSWAP-205ENST00000537164 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.11■□□□□ 0.65
SFSWAP-205ENST00000537164 ITGB1P05556 798 aa19.11■□□□□ 0.65
SFSWAP-205ENST00000537164 GLRA2P23416 452 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms