RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 ZBTB10Q96DT7 871 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 THOC1Q96FV9 657 aaKnown RBP19.47■□□□□ 0.71
RAB40C-203ENST00000535977 MKNK1Q9BUB5 465 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 SLX4Q8IY92 1834 aa19.47■□□□□ 0.71
RAB40C-203ENST00000535977 PSMD10O75832 226 aa19.46■□□□□ 0.71
RAB40C-203ENST00000535977 GFPT2O94808 682 aa19.46■□□□□ 0.71
RAB40C-203ENST00000535977 XRCC4Q13426 336 aa19.46■□□□□ 0.71
RAB40C-203ENST00000535977 FAM160B2Q86V87 743 aa19.46■□□□□ 0.71
RAB40C-203ENST00000535977 NSMCE1Q8WV22 266 aa19.46■□□□□ 0.71
RAB40C-203ENST00000535977 SLC5A5Q92911 643 aa19.46■□□□□ 0.71
RAB40C-203ENST00000535977 WDR11Q9BZH6 1224 aa19.46■□□□□ 0.71
RAB40C-203ENST00000535977 SMARCAL1Q9NZC9 954 aa19.46■□□□□ 0.71
RAB40C-203ENST00000535977 ENO4A6NNW6 628 aa19.46■□□□□ 0.71
RAB40C-203ENST00000535977 ATP6V1G2O95670 118 aa19.46■□□□□ 0.71
RAB40C-203ENST00000535977 KLRC1P26715 233 aa19.46■□□□□ 0.71
RAB40C-203ENST00000535977 CYP4A11Q02928 519 aa19.46■□□□□ 0.71
RAB40C-203ENST00000535977 EPHA7Q15375 998 aa19.46■□□□□ 0.71
RAB40C-203ENST00000535977 FAM151AQ8WW52 585 aa19.46■□□□□ 0.71
RAB40C-203ENST00000535977 STAMBPL1Q96FJ0 436 aa19.46■□□□□ 0.71
RAB40C-203ENST00000535977 RUSC1Q9BVN2 902 aa19.46■□□□□ 0.71
RAB40C-203ENST00000535977 NOD2Q9HC29 1040 aa19.46■□□□□ 0.71
RAB40C-203ENST00000535977 BATF3Q9NR55 127 aa19.46■□□□□ 0.71
RAB40C-203ENST00000535977 KIF13BQ9NQT8 1826 aa19.46■□□□□ 0.71
RAB40C-203ENST00000535977 EML1O00423 815 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 FLOT1O75955 427 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 AKAP3O75969 853 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 JAG1P78504 1218 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 QPCTQ16769 361 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 C8orf74Q6P047 294 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 SAAL1Q96ER3 474 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 ATP6V1G3Q96LB4 118 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 NACC1Q96RE7 527 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 RANBP17Q9H2T7 1088 aaKnown RBP19.45■□□□□ 0.7
RAB40C-203ENST00000535977 INTUQ9ULD6 942 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 ASTN1O14525 1302 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 FAM153BP0C7A2 387 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 PSMC2P35998 433 aaKnown RBP19.45■□□□□ 0.7
RAB40C-203ENST00000535977 SSR1P43307 286 aaKnown RBP19.45■□□□□ 0.7
RAB40C-203ENST00000535977 PRELPP51888 382 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 MYO1EQ12965 1108 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 ITGB3BPQ13352 177 aaPredicted RBP19.45■□□□□ 0.7
RAB40C-203ENST00000535977 FAM153CQ494X1 144 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 C1orf186Q6ZWK4 172 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 IFT20Q8IY31 132 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 PIK3R5Q8WYR1 880 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 FAM153AQ9UHL3 310 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 SRRM3A6NNA2 597 aaPredicted RBP19.45■□□□□ 0.7
RAB40C-203ENST00000535977 BUB1BO60566 1050 aaPredicted RBP19.45■□□□□ 0.7
RAB40C-203ENST00000535977 SLITRK3O94933 977 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 SLC9A1P19634 815 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 CXCR5P32302 372 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 RWDD2BP57060 319 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 ARID5AQ03989 594 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 BZW1Q7L1Q6 419 aaKnown RBP19.45■□□□□ 0.7
RAB40C-203ENST00000535977 CCDC125Q86Z20 511 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 CYP2W1Q8TAV3 490 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 TAF4BQ92750 862 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 PARVGQ9HBI0 331 aa19.45■□□□□ 0.7
RAB40C-203ENST00000535977 NCK2O43639 380 aa19.44■□□□□ 0.7
RAB40C-203ENST00000535977 CFBP00751 764 aa19.44■□□□□ 0.7
RAB40C-203ENST00000535977 HPDP32754 393 aaPredicted RBP19.44■□□□□ 0.7
RAB40C-203ENST00000535977 PTK2Q05397 1052 aa19.44■□□□□ 0.7
RAB40C-203ENST00000535977 RRP1BQ14684 758 aaKnown RBP19.44■□□□□ 0.7
RAB40C-203ENST00000535977 MSL1Q68DK7 614 aa19.44■□□□□ 0.7
RAB40C-203ENST00000535977 SLC35C1Q96A29 364 aa19.44■□□□□ 0.7
RAB40C-203ENST00000535977 RGL1Q9NZL6 768 aa19.44■□□□□ 0.7
RAB40C-203ENST00000535977 EHD2Q9NZN4 543 aa19.44■□□□□ 0.7
RAB40C-203ENST00000535977 BAIAP2L1Q9UHR4 511 aa19.44■□□□□ 0.7
RAB40C-203ENST00000535977 PPIP5K2O43314 1243 aa19.44■□□□□ 0.7
RAB40C-203ENST00000535977 VIL1P09327 827 aaKnown RBP19.44■□□□□ 0.7
RAB40C-203ENST00000535977 ELF3P78545 371 aaPredicted RBP19.44■□□□□ 0.7
RAB40C-203ENST00000535977 DCAF17Q5H9S7 520 aaPredicted RBP19.44■□□□□ 0.7
RAB40C-203ENST00000535977 TPH2Q8IWU9 490 aa19.44■□□□□ 0.7
RAB40C-203ENST00000535977 SPICE1Q8N0Z3 855 aa19.44■□□□□ 0.7
RAB40C-203ENST00000535977 MYCT1Q8N699 235 aa19.44■□□□□ 0.7
RAB40C-203ENST00000535977 SPDYE1Q8NFV5 336 aaPredicted RBP19.44■□□□□ 0.7
RAB40C-203ENST00000535977 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.44■□□□□ 0.7
RAB40C-203ENST00000535977 GMNCA6NCL1 334 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 SPDYE2BA6NHP3 402 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 RSPH10B2B2RC85 870 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 TBC1D12O60347 775 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 GAS7O60861 476 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 SNUPNO95149 360 aaKnown RBP19.43■□□□□ 0.7
RAB40C-203ENST00000535977 RSPH10BP0C881 870 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 SPDYE6P0CI01 402 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 FERP16591 822 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 CEP55Q53EZ4 464 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 FKBP1CQ5VVH2 108 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 TCERG1LQ5VWI1 586 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 NEK9Q8TD19 979 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 PBKQ96KB5 322 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 DEFB129Q9H1M3 183 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 EBF2Q9HAK2 575 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 A0A0A6YYK5 440 aaPredicted RBP19.43■□□□□ 0.7
RAB40C-203ENST00000535977 ACTN1P12814 892 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 ZNF131P52739 623 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 LACTB2Q53H82 288 aaPredicted RBP19.43■□□□□ 0.7
RAB40C-203ENST00000535977 ZNF571Q7Z3V5 609 aaPredicted RBP19.43■□□□□ 0.7
RAB40C-203ENST00000535977 BORCS6Q96GS4 357 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 DYDC2Q96IM9 177 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms