RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 SCDO00767 359 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 KCNK3O14649 394 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 DAPK3O43293 454 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 C1RP00736 705 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 JUNP05412 331 aaKnown RBP1.48□□□□□ -2.17
COPB1-212ENST00000534771 MMEP08473 750 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 SRGAP2CP0DJJ0 459 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 NAT1P18440 290 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 GNAT2P19087 354 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 CCKBRP32239 447 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 ETFBP38117 255 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 NPEPPSP55786 919 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 ANTXR2P58335 489 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 ADAM8P78325 824 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 LACTBP83111 547 aaPredicted RBP1.48□□□□□ -2.17
COPB1-212ENST00000534771 TCIRG1Q13488 830 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 PRR16Q569H4 304 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 C1QL3Q5VWW1 255 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 SP5Q6BEB4 398 aaPredicted RBP1.48□□□□□ -2.17
COPB1-212ENST00000534771 IQSEC1Q6DN90 963 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 Q6YL49 198 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 MTDHQ86UE4 582 aaKnown RBP1.48□□□□□ -2.17
COPB1-212ENST00000534771 CMTR2Q8IYT2 770 aaKnown RBP1.48□□□□□ -2.17
COPB1-212ENST00000534771 CMTM4Q8IZR5 234 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 MB21D1Q8N884 522 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 PLA2G15Q8NCC3 412 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 BEND2Q8NDZ0 799 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 PCDH19Q8TAB3 1148 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 SLC7A14Q8TBB6 771 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 CAGE1Q8TC20 777 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 ASB15Q8WXK1 588 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 ST8SIA2Q92186 375 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 OSBP2Q969R2 916 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 MYEOVQ96EZ4 313 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 SPATA5L1Q9BVQ7 753 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 SLC29A3Q9BZD2 475 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 WDR11Q9BZH6 1224 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 SERHL2Q9H4I8 314 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 IL23AQ9NPF7 189 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 ST7Q9NRC1 585 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 MAGEL2Q9UJ55 1249 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 CBLCQ9ULV8 474 aa1.48□□□□□ -2.17
COPB1-212ENST00000534771 R3HCC1Q9Y3T6 440 aaKnown RBP1.48□□□□□ -2.17
COPB1-212ENST00000534771 EPN1Q9Y6I3 576 aaPredicted RBP1.48□□□□□ -2.17
COPB1-212ENST00000534771 TRAV20A0A0B4J274 112 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 MYADML2A6NDP7 307 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 TMEM200CA6NKL6 621 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 ZNF561-AS1K7EIQ3 104 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 ZNF185O15231 689 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 FOXP2O15409 715 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 KCNAB3O43448 404 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 MAFO75444 373 aaPredicted RBP1.47□□□□□ -2.17
COPB1-212ENST00000534771 TOX4O94842 621 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 RECKO95980 971 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 VSIG10L2P0DP72 767 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 HKR1P10072 659 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 HK1P19367 917 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 VAMP1P23763 118 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 CXCR5P32302 372 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 KIR2DL3P43628 341 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 PTH2RP49190 550 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 DNM2P50570 870 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 GUCY1A3Q02108 690 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 ALDH6A1Q02252 535 aaKnown RBP1.47□□□□□ -2.17
COPB1-212ENST00000534771 FOXI1Q12951 378 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 SPIDRQ14159 915 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 SEC23AQ15436 765 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 DGKDQ16760 1214 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 DCAF17Q5H9S7 520 aaPredicted RBP1.47□□□□□ -2.17
COPB1-212ENST00000534771 FAM47CQ5HY64 1035 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 CCDC62Q6P9F0 684 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 APBB1IPQ7Z5R6 666 aaPredicted RBP1.47□□□□□ -2.17
COPB1-212ENST00000534771 FAM83AQ86UY5 434 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 CXorf67Q86X51 503 aaPredicted RBP1.47□□□□□ -2.17
COPB1-212ENST00000534771 ARHGEF19Q8IW93 802 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 LRRC47Q8N1G4 583 aaKnown RBP1.47□□□□□ -2.17
COPB1-212ENST00000534771 BOLLQ8N9W6 283 aaKnown RBP1.47□□□□□ -2.17
COPB1-212ENST00000534771 SIMC1Q8NDZ2 872 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 PTPRN2Q92932 1015 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 COQ10AQ96MF6 247 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 DCLRE1CQ96SD1 692 aaKnown RBP1.47□□□□□ -2.17
COPB1-212ENST00000534771 TGIF2Q9GZN2 237 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 KCNH6Q9H252 994 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 ACBD3Q9H3P7 528 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 PRDM13Q9H4Q3 707 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 ARHGEF4Q9NR80 690 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 KCNH7Q9NS40 1196 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 SYBUQ9NX95 663 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 ANKFY1Q9P2R3 1169 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 NCDNQ9UBB6 729 aa1.47□□□□□ -2.17
COPB1-212ENST00000534771 EIF2B4Q9UI10 523 aaKnown RBP1.47□□□□□ -2.17
COPB1-212ENST00000534771 COL3A1P02461 1466 aaPredicted RBP1.46□□□□□ -2.18
COPB1-212ENST00000534771 PIPSLA2A3N6 862 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 CCDC66A2RUB6 948 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 RASSF10A6NK89 507 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 ARVCFO00192 962 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 TRIM24O15164 1050 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 HOXA3O43365 443 aaPredicted RBP1.46□□□□□ -2.18
COPB1-212ENST00000534771 LPXNO60711 386 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 ZFPL1O95159 310 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms