RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 CNTNAP5Q8WYK1 1306 aa14.08□□□□□ -0.16
CAPN1-223ENST00000533079 SPDYE4A6NLX3 237 aa14.07□□□□□ -0.16
CAPN1-223ENST00000533079 DHX15O43143 795 aaKnown RBP14.07□□□□□ -0.16
CAPN1-223ENST00000533079 SGSM2O43147 1006 aa14.07□□□□□ -0.16
CAPN1-223ENST00000533079 PI15O43692 258 aa14.07□□□□□ -0.16
CAPN1-223ENST00000533079 PSAPP07602 524 aa14.07□□□□□ -0.16
CAPN1-223ENST00000533079 DARSP14868 501 aaKnown RBP14.07□□□□□ -0.16
CAPN1-223ENST00000533079 RXRAP19793 462 aa14.07□□□□□ -0.16
CAPN1-223ENST00000533079 CHMLP26374 656 aa14.07□□□□□ -0.16
CAPN1-223ENST00000533079 GPC3P51654 580 aa14.07□□□□□ -0.16
CAPN1-223ENST00000533079 LETM2Q2VYF4 491 aa14.07□□□□□ -0.16
CAPN1-223ENST00000533079 ELMSAN1Q6PJG2 1045 aa14.07□□□□□ -0.16
CAPN1-223ENST00000533079 TMC5Q6UXY8 1006 aa14.07□□□□□ -0.16
CAPN1-223ENST00000533079 CYP26C1Q6V0L0 522 aa14.07□□□□□ -0.16
CAPN1-223ENST00000533079 SGMS1Q86VZ5 419 aa14.07□□□□□ -0.16
CAPN1-223ENST00000533079 PLA2G4DQ86XP0 818 aa14.07□□□□□ -0.16
CAPN1-223ENST00000533079 FANCBQ8NB91 859 aa14.07□□□□□ -0.16
CAPN1-223ENST00000533079 KCNG4Q8TDN1 519 aa14.07□□□□□ -0.16
CAPN1-223ENST00000533079 IGSF21Q96ID5 467 aa14.07□□□□□ -0.16
CAPN1-223ENST00000533079 EMILIN2Q9BXX0 1053 aa14.07□□□□□ -0.16
CAPN1-223ENST00000533079 DPP7Q9UHL4 492 aa14.07□□□□□ -0.16
CAPN1-223ENST00000533079 IGLV3-22A0A075B6J6 115 aa14.06□□□□□ -0.16
CAPN1-223ENST00000533079 hCG_1642624A0A1W2PR95 340 aa14.06□□□□□ -0.16
CAPN1-223ENST00000533079 NT5C1B-RDH14C9J2C7 533 aa14.06□□□□□ -0.16
CAPN1-223ENST00000533079 FAM86B1E9PN63 330 aa14.06□□□□□ -0.16
CAPN1-223ENST00000533079 FAM86B2P0C5J1 330 aa14.06□□□□□ -0.16
CAPN1-223ENST00000533079 CLCN4P51793 760 aa14.06□□□□□ -0.16
CAPN1-223ENST00000533079 CDC42EP1Q00587 391 aa14.06□□□□□ -0.16
CAPN1-223ENST00000533079 PTPN14Q15678 1187 aa14.06□□□□□ -0.16
CAPN1-223ENST00000533079 EFCAB12Q6NXP0 572 aa14.06□□□□□ -0.16
CAPN1-223ENST00000533079 GLB1LQ6UWU2 654 aa14.06□□□□□ -0.16
CAPN1-223ENST00000533079 CCDC82Q8N4S0 544 aa14.06□□□□□ -0.16
CAPN1-223ENST00000533079 CMASQ8NFW8 434 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-223ENST00000533079 STAMQ92783 540 aa14.06□□□□□ -0.16
CAPN1-223ENST00000533079 NXPE3Q969Y0 559 aa14.06□□□□□ -0.16
CAPN1-223ENST00000533079 BORCS6Q96GS4 357 aa14.06□□□□□ -0.16
CAPN1-223ENST00000533079 PGBD1Q96JS3 809 aa14.06□□□□□ -0.16
CAPN1-223ENST00000533079 SCLT1Q96NL6 688 aa14.06□□□□□ -0.16
CAPN1-223ENST00000533079 ZNF577Q9BSK1 485 aa14.06□□□□□ -0.16
CAPN1-223ENST00000533079 BARHL2Q9NY43 387 aa14.06□□□□□ -0.16
CAPN1-223ENST00000533079 PCDHA10Q9Y5I2 948 aa14.06□□□□□ -0.16
CAPN1-223ENST00000533079 RBM8AQ9Y5S9 174 aaKnown RBP14.06□□□□□ -0.16
CAPN1-223ENST00000533079 MED19A0JLT2 244 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-223ENST00000533079 IGHDP01880 384 aa14.05□□□□□ -0.16
CAPN1-223ENST00000533079 CYP3A4P08684 503 aa14.05□□□□□ -0.16
CAPN1-223ENST00000533079 RFX1P22670 979 aa14.05□□□□□ -0.16
CAPN1-223ENST00000533079 SFPQP23246 707 aaKnown RBP eCLIP14.05□□□□□ -0.16
CAPN1-223ENST00000533079 PHKA2P46019 1235 aa14.05□□□□□ -0.16
CAPN1-223ENST00000533079 RAB27AP51159 221 aa14.05□□□□□ -0.16
CAPN1-223ENST00000533079 TBC1D8BQ0IIM8 1120 aa14.05□□□□□ -0.16
CAPN1-223ENST00000533079 TYW1BQ6NUM6 668 aa14.05□□□□□ -0.16
CAPN1-223ENST00000533079 SYNE3Q6ZMZ3 975 aa14.05□□□□□ -0.16
CAPN1-223ENST00000533079 TMEM173Q86WV6 379 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-223ENST00000533079 MICU3Q86XE3 530 aa14.05□□□□□ -0.16
CAPN1-223ENST00000533079 CRYGNQ8WXF5 182 aa14.05□□□□□ -0.16
CAPN1-223ENST00000533079 AUTS2Q8WXX7 1259 aa14.05□□□□□ -0.16
CAPN1-223ENST00000533079 RIF1Q5UIP0 2472 aaKnown RBP14.05□□□□□ -0.16
CAPN1-223ENST00000533079 EVPLQ92817 2033 aa14.05□□□□□ -0.16
CAPN1-223ENST00000533079 SMCO2A6NFE2 343 aa14.04□□□□□ -0.16
CAPN1-223ENST00000533079 WDR64B1ANS9 1081 aa14.04□□□□□ -0.16
CAPN1-223ENST00000533079 OATP04181 439 aa14.04□□□□□ -0.16
CAPN1-223ENST00000533079 PHLDB3Q6NSJ2 640 aa14.04□□□□□ -0.16
CAPN1-223ENST00000533079 LRRC71Q8N4P6 559 aa14.04□□□□□ -0.16
CAPN1-223ENST00000533079 NLRP7Q8WX94 980 aa14.04□□□□□ -0.16
CAPN1-223ENST00000533079 RUBCNQ92622 972 aa14.04□□□□□ -0.16
CAPN1-223ENST00000533079 TBC1D13Q9NVG8 400 aa14.04□□□□□ -0.16
CAPN1-223ENST00000533079 DLL3Q9NYJ7 618 aa14.04□□□□□ -0.16
CAPN1-223ENST00000533079 EPS15L1Q9UBC2 864 aa14.04□□□□□ -0.16
CAPN1-223ENST00000533079 GABBR1Q9UBS5 961 aa14.04□□□□□ -0.16
CAPN1-223ENST00000533079 C2orf16Q68DN1 1984 aa14.03□□□□□ -0.16
CAPN1-223ENST00000533079 PTPRZ1P23471 2315 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-223ENST00000533079 GALTP07902 379 aa14.03□□□□□ -0.16
CAPN1-223ENST00000533079 SRFP11831 508 aa14.03□□□□□ -0.16
CAPN1-223ENST00000533079 KLRC2P26717 231 aa14.03□□□□□ -0.16
CAPN1-223ENST00000533079 RNASELQ05823 741 aaKnown RBP14.03□□□□□ -0.16
CAPN1-223ENST00000533079 NOMO2Q5JPE7 1267 aa14.03□□□□□ -0.16
CAPN1-223ENST00000533079 KANK3Q6NY19 840 aa14.03□□□□□ -0.16
CAPN1-223ENST00000533079 KIAA2013Q8IYS2 634 aa14.03□□□□□ -0.16
CAPN1-223ENST00000533079 HINFPQ9BQA5 517 aa14.03□□□□□ -0.16
CAPN1-223ENST00000533079 GCOM2Q9BZD3 368 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-223ENST00000533079 INO80BQ9C086 356 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-223ENST00000533079 NRDE2Q9H7Z3 1164 aa14.03□□□□□ -0.16
CAPN1-223ENST00000533079 NRBP2Q9NSY0 501 aa14.03□□□□□ -0.16
CAPN1-223ENST00000533079 SSX2IPQ9Y2D8 614 aa14.03□□□□□ -0.16
CAPN1-223ENST00000533079 SAMM50Q9Y512 469 aa14.03□□□□□ -0.16
CAPN1-223ENST00000533079 CLUHO75153 1309 aa14.03□□□□□ -0.16
CAPN1-223ENST00000533079 MYH9P35579 1960 aaKnown RBP14.03□□□□□ -0.16
CAPN1-223ENST00000533079 WDR87Q6ZQQ6 2873 aa14.03□□□□□ -0.16
CAPN1-223ENST00000533079 ZFHX4Q86UP3 3567 aa14.03□□□□□ -0.16
CAPN1-223ENST00000533079 ESYT2A0FGR8 921 aa14.02□□□□□ -0.17
CAPN1-223ENST00000533079 KRBA1A5PL33 1030 aa14.02□□□□□ -0.17
CAPN1-223ENST00000533079 STK25O00506 426 aa14.02□□□□□ -0.17
CAPN1-223ENST00000533079 CFHP08603 1231 aa14.02□□□□□ -0.17
CAPN1-223ENST00000533079 SDHBP21912 280 aa14.02□□□□□ -0.17
CAPN1-223ENST00000533079 PRKCEQ02156 737 aa14.02□□□□□ -0.17
CAPN1-223ENST00000533079 TWF2Q6IBS0 349 aaKnown RBP14.02□□□□□ -0.17
CAPN1-223ENST00000533079 APOA5Q6Q788 366 aa14.02□□□□□ -0.17
CAPN1-223ENST00000533079 ZNF410Q86VK4 478 aa14.02□□□□□ -0.17
CAPN1-223ENST00000533079 URGCPQ8TCY9 931 aa14.02□□□□□ -0.17
CAPN1-223ENST00000533079 BCL7CQ8WUZ0 217 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms