RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 LYPLA2O95372 231 aa17.68■□□□□ 0.42
LDLRAD3-205ENST00000532490 GTF2F1P35269 517 aaKnown RBP eCLIP17.68■□□□□ 0.42
LDLRAD3-205ENST00000532490 RFC5P40937 340 aa17.68■□□□□ 0.42
LDLRAD3-205ENST00000532490 GUCY1B3Q02153 619 aa17.68■□□□□ 0.42
LDLRAD3-205ENST00000532490 CYP4A11Q02928 519 aa17.68■□□□□ 0.42
LDLRAD3-205ENST00000532490 CLLU1OSQ5K130 101 aa17.68■□□□□ 0.42
LDLRAD3-205ENST00000532490 EXOC8Q8IYI6 725 aa17.68■□□□□ 0.42
LDLRAD3-205ENST00000532490 COLGALT1Q8NBJ5 622 aa17.68■□□□□ 0.42
LDLRAD3-205ENST00000532490 POF1BQ8WVV4 589 aa17.68■□□□□ 0.42
LDLRAD3-205ENST00000532490 SLC7A3Q8WY07 619 aa17.68■□□□□ 0.42
LDLRAD3-205ENST00000532490 EIF2AK1Q9BQI3 630 aaKnown RBP17.68■□□□□ 0.42
LDLRAD3-205ENST00000532490 TMEM60Q9H2L4 133 aa17.68■□□□□ 0.42
LDLRAD3-205ENST00000532490 TTC12Q9H892 705 aaPredicted RBP17.68■□□□□ 0.42
LDLRAD3-205ENST00000532490 PCDHB12Q9Y5F1 795 aa17.68■□□□□ 0.42
LDLRAD3-205ENST00000532490 ARID2Q68CP9 1835 aa17.68■□□□□ 0.42
LDLRAD3-205ENST00000532490 GRXCR2A6NFK2 248 aa17.67■□□□□ 0.42
LDLRAD3-205ENST00000532490 H3BQ06 376 aaPredicted RBP17.67■□□□□ 0.42
LDLRAD3-205ENST00000532490 HOXA2O43364 376 aa17.67■□□□□ 0.42
LDLRAD3-205ENST00000532490 NEMFO60524 1076 aa17.67■□□□□ 0.42
LDLRAD3-205ENST00000532490 EOMESO95936 686 aa17.67■□□□□ 0.42
LDLRAD3-205ENST00000532490 SFPQP23246 707 aaKnown RBP eCLIP17.67■□□□□ 0.42
LDLRAD3-205ENST00000532490 POLGP54098 1239 aaPredicted RBP17.67■□□□□ 0.42
LDLRAD3-205ENST00000532490 OTUD6AQ7L8S5 288 aa17.67■□□□□ 0.42
LDLRAD3-205ENST00000532490 TPH2Q8IWU9 490 aa17.67■□□□□ 0.42
LDLRAD3-205ENST00000532490 FBXO18Q8NFZ0 1043 aa17.67■□□□□ 0.42
LDLRAD3-205ENST00000532490 PRPF31Q8WWY3 499 aaKnown RBP17.67■□□□□ 0.42
LDLRAD3-205ENST00000532490 TMEM143Q96AN5 459 aa17.67■□□□□ 0.42
LDLRAD3-205ENST00000532490 C8orf76Q96K31 380 aa17.67■□□□□ 0.42
LDLRAD3-205ENST00000532490 INO80BQ9C086 356 aaPredicted RBP17.67■□□□□ 0.42
LDLRAD3-205ENST00000532490 SH2B1Q9NRF2 756 aaPredicted RBP17.67■□□□□ 0.42
LDLRAD3-205ENST00000532490 AAASQ9NRG9 546 aa17.67■□□□□ 0.42
LDLRAD3-205ENST00000532490 CLDND1Q9NY35 253 aa17.67■□□□□ 0.42
LDLRAD3-205ENST00000532490 DACT1Q9NYF0 836 aa17.67■□□□□ 0.42
LDLRAD3-205ENST00000532490 COL4A3BPQ9Y5P4 624 aa17.67■□□□□ 0.42
LDLRAD3-205ENST00000532490 CSPG5O95196 566 aa17.66■□□□□ 0.42
LDLRAD3-205ENST00000532490 IL9P15248 144 aa17.66■□□□□ 0.42
LDLRAD3-205ENST00000532490 TXKP42681 527 aa17.66■□□□□ 0.42
LDLRAD3-205ENST00000532490 PHKA2P46019 1235 aa17.66■□□□□ 0.42
LDLRAD3-205ENST00000532490 UBE3AQ05086 875 aa17.66■□□□□ 0.42
LDLRAD3-205ENST00000532490 DLX2Q07687 328 aaPredicted RBP17.66■□□□□ 0.42
LDLRAD3-205ENST00000532490 ADAM15Q13444 863 aa17.66■□□□□ 0.42
LDLRAD3-205ENST00000532490 EMC2Q15006 297 aa17.66■□□□□ 0.42
LDLRAD3-205ENST00000532490 SAFBQ15424 915 aaKnown RBP eCLIP17.66■□□□□ 0.42
LDLRAD3-205ENST00000532490 XKR9Q5GH70 373 aa17.66■□□□□ 0.42
LDLRAD3-205ENST00000532490 PTCRAQ6ISU1 281 aaPredicted RBP17.66■□□□□ 0.42
LDLRAD3-205ENST00000532490 ADGRD2Q7Z7M1 963 aa17.66■□□□□ 0.42
LDLRAD3-205ENST00000532490 FAM178BQ8IXR5 827 aa17.66■□□□□ 0.42
LDLRAD3-205ENST00000532490 NLRP4Q96MN2 994 aa17.66■□□□□ 0.42
LDLRAD3-205ENST00000532490 FOXP1Q9H334 677 aaPredicted RBP17.66■□□□□ 0.42
LDLRAD3-205ENST00000532490 MINDY3Q9H8M7 445 aa17.66■□□□□ 0.42
LDLRAD3-205ENST00000532490 CD320Q9NPF0 282 aa17.66■□□□□ 0.42
LDLRAD3-205ENST00000532490 XPNPEP1Q9NQW7 623 aa17.66■□□□□ 0.42
LDLRAD3-205ENST00000532490 LINC01565O15544 149 aa17.65■□□□□ 0.42
LDLRAD3-205ENST00000532490 GAS2O43903 313 aaKnown RBP17.65■□□□□ 0.42
LDLRAD3-205ENST00000532490 FGF18O76093 207 aa17.65■□□□□ 0.42
LDLRAD3-205ENST00000532490 LAG3P18627 525 aa17.65■□□□□ 0.42
LDLRAD3-205ENST00000532490 HMGN5P82970 282 aaKnown RBP17.65■□□□□ 0.42
LDLRAD3-205ENST00000532490 LAMTOR4Q0VGL1 99 aa17.65■□□□□ 0.42
LDLRAD3-205ENST00000532490 CSPP1Q1MSJ5 1256 aa17.65■□□□□ 0.42
LDLRAD3-205ENST00000532490 PUS10Q3MIT2 529 aaKnown RBP17.65■□□□□ 0.42
LDLRAD3-205ENST00000532490 SPOUT1Q5T280 376 aaKnown RBP17.65■□□□□ 0.42
LDLRAD3-205ENST00000532490 FERMT3Q86UX7 667 aa17.65■□□□□ 0.42
LDLRAD3-205ENST00000532490 PSPC1Q8WXF1 523 aaKnown RBP17.65■□□□□ 0.42
LDLRAD3-205ENST00000532490 BMP2KQ9NSY1 1161 aaPredicted RBP17.65■□□□□ 0.42
LDLRAD3-205ENST00000532490 ANKEF1Q9NU02 776 aa17.65■□□□□ 0.42
LDLRAD3-205ENST00000532490 PCDHGC5Q9Y5F6 944 aa17.65■□□□□ 0.42
LDLRAD3-205ENST00000532490 POTEMA6NI47 508 aa17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 FSCN2O14926 492 aa17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 ASAP2O43150 1006 aa17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 ZNF623O75123 536 aa17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 TBX10O75333 385 aa17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 SRGAP2CP0DJJ0 459 aa17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 SPATA31C1P0DKV0 1188 aa17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 MCM7P33993 719 aa17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 ERVFC1P60507 584 aa17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 PLCB3Q01970 1234 aa17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 CATSPER4Q7RTX7 472 aa17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 SRGAP1Q7Z6B7 1085 aa17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 LRRC43Q8N309 656 aa17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 RNF169Q8NCN4 708 aa17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 HELQQ8TDG4 1101 aa17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 TCP11Q8WWU5 503 aa17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 IGFLR1Q9H665 355 aa17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 AGPAT5Q9NUQ2 364 aa17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 PIN4Q9Y237 131 aaKnown RBP17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 LZTS1Q9Y250 596 aa17.64■□□□□ 0.41
LDLRAD3-205ENST00000532490 ATP2B1P20020 1258 aa17.63■□□□□ 0.41
LDLRAD3-205ENST00000532490 HOXA11P31270 313 aaPredicted RBP17.63■□□□□ 0.41
LDLRAD3-205ENST00000532490 RARRES1P49788 294 aa17.63■□□□□ 0.41
LDLRAD3-205ENST00000532490 ORC2Q13416 577 aaPredicted RBP17.63■□□□□ 0.41
LDLRAD3-205ENST00000532490 TWF2Q6IBS0 349 aaKnown RBP17.63■□□□□ 0.41
LDLRAD3-205ENST00000532490 KCNT2Q6UVM3 1135 aa17.63■□□□□ 0.41
LDLRAD3-205ENST00000532490 EP400NLQ6ZTU2 488 aa17.63■□□□□ 0.41
LDLRAD3-205ENST00000532490 THNSL1Q8IYQ7 743 aa17.63■□□□□ 0.41
LDLRAD3-205ENST00000532490 ABI1Q8IZP0 508 aa17.63■□□□□ 0.41
LDLRAD3-205ENST00000532490 EFHBQ8N7U6 833 aa17.63■□□□□ 0.41
LDLRAD3-205ENST00000532490 KHSRPQ92945 711 aaKnown RBP eCLIP17.63■□□□□ 0.41
LDLRAD3-205ENST00000532490 MTRQ99707 1265 aa17.63■□□□□ 0.41
LDLRAD3-205ENST00000532490 TLR9Q9NR96 1032 aa17.63■□□□□ 0.41
LDLRAD3-205ENST00000532490 FAM105AQ9NUU6 356 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms