RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 MXD4Q14582 209 aaPredicted RBP18.24■□□□□ 0.51
PABPC1-221ENST00000522720 ECM1Q16610 540 aa18.24■□□□□ 0.51
PABPC1-221ENST00000522720 EPC2Q52LR7 807 aa18.24■□□□□ 0.51
PABPC1-221ENST00000522720 SRGAP1Q7Z6B7 1085 aa18.24■□□□□ 0.51
PABPC1-221ENST00000522720 CMTR2Q8IYT2 770 aaKnown RBP18.24■□□□□ 0.51
PABPC1-221ENST00000522720 ELAC1Q9H777 363 aaKnown RBP18.24■□□□□ 0.51
PABPC1-221ENST00000522720 CHST12Q9NRB3 414 aa18.24■□□□□ 0.51
PABPC1-221ENST00000522720 MTCH2Q9Y6C9 303 aa18.24■□□□□ 0.51
PABPC1-221ENST00000522720 NLRC5Q86WI3 1866 aa18.24■□□□□ 0.51
PABPC1-221ENST00000522720 PRUNE2Q8WUY3 3088 aa18.24■□□□□ 0.51
PABPC1-221ENST00000522720 GTPBP6O43824 516 aaPredicted RBP18.23■□□□□ 0.51
PABPC1-221ENST00000522720 ARL6IP4Q66PJ3 421 aaKnown RBP18.23■□□□□ 0.51
PABPC1-221ENST00000522720 TMEM192Q8IY95 271 aa18.23■□□□□ 0.51
PABPC1-221ENST00000522720 RNF149Q8NC42 400 aa18.23■□□□□ 0.51
PABPC1-221ENST00000522720 FBXO22Q8NEZ5 403 aa18.23■□□□□ 0.51
PABPC1-221ENST00000522720 SNX29Q8TEQ0 813 aa18.23■□□□□ 0.51
PABPC1-221ENST00000522720 CLP1Q92989 425 aaKnown RBP18.23■□□□□ 0.51
PABPC1-221ENST00000522720 TMEM161AQ9NX61 479 aa18.23■□□□□ 0.51
PABPC1-221ENST00000522720 DACT1Q9NYF0 836 aa18.23■□□□□ 0.51
PABPC1-221ENST00000522720 RALGAPA2Q2PPJ7 1873 aa18.22■□□□□ 0.51
PABPC1-221ENST00000522720 A0A0U1RQF3 1178 aa18.22■□□□□ 0.51
PABPC1-221ENST00000522720 LINC00271P0C7V0 271 aa18.22■□□□□ 0.51
PABPC1-221ENST00000522720 IBSPP21815 317 aaPredicted RBP18.22■□□□□ 0.51
PABPC1-221ENST00000522720 POU5F1BQ06416 359 aa18.22■□□□□ 0.51
PABPC1-221ENST00000522720 KRT79Q5XKE5 535 aa18.22■□□□□ 0.51
PABPC1-221ENST00000522720 CATSPER4Q7RTX7 472 aa18.22■□□□□ 0.51
PABPC1-221ENST00000522720 GDPD5Q8WTR4 605 aa18.22■□□□□ 0.51
PABPC1-221ENST00000522720 MINDY3Q9H8M7 445 aa18.22■□□□□ 0.51
PABPC1-221ENST00000522720 FOXD4L1Q9NU39 408 aa18.22■□□□□ 0.51
PABPC1-221ENST00000522720 LMCD1Q9NZU5 365 aa18.22■□□□□ 0.51
PABPC1-221ENST00000522720 KIAA1024Q9UPX6 916 aa18.22■□□□□ 0.51
PABPC1-221ENST00000522720 FNDC1Q4ZHG4 1894 aaPredicted RBP18.22■□□□□ 0.51
PABPC1-221ENST00000522720 ARHGEF35A5YM69 484 aa18.21■□□□□ 0.51
PABPC1-221ENST00000522720 PP2D1A8MPX8 630 aa18.21■□□□□ 0.51
PABPC1-221ENST00000522720 USO1O60763 962 aaKnown RBP18.21■□□□□ 0.51
PABPC1-221ENST00000522720 RB1P06400 928 aa18.21■□□□□ 0.51
PABPC1-221ENST00000522720 CYP11B2P19099 503 aa18.21■□□□□ 0.51
PABPC1-221ENST00000522720 CDC25AP30304 524 aa18.21■□□□□ 0.51
PABPC1-221ENST00000522720 BMPR1AP36894 532 aa18.21■□□□□ 0.51
PABPC1-221ENST00000522720 PHKA2P46019 1235 aa18.21■□□□□ 0.51
PABPC1-221ENST00000522720 GATMP50440 423 aa18.21■□□□□ 0.51
PABPC1-221ENST00000522720 PTENP60484 403 aa18.21■□□□□ 0.51
PABPC1-221ENST00000522720 TFDP1Q14186 410 aa18.21■□□□□ 0.51
PABPC1-221ENST00000522720 FAM102BQ5T8I3 360 aa18.21■□□□□ 0.51
PABPC1-221ENST00000522720 ECHDC2Q86YB7 292 aa18.21■□□□□ 0.51
PABPC1-221ENST00000522720 HSCBQ8IWL3 235 aa18.21■□□□□ 0.51
PABPC1-221ENST00000522720 MCPH1Q8NEM0 835 aa18.21■□□□□ 0.51
PABPC1-221ENST00000522720 ASAP3Q8TDY4 903 aa18.21■□□□□ 0.51
PABPC1-221ENST00000522720 TRAIPQ9BWF2 469 aa18.21■□□□□ 0.51
PABPC1-221ENST00000522720 RWDD3Q9Y3V2 267 aa18.21■□□□□ 0.51
PABPC1-221ENST00000522720 COL4A4P53420 1690 aaPredicted RBP18.2■□□□□ 0.5
PABPC1-221ENST00000522720 C5orf67F2Z3F1 127 aa18.2■□□□□ 0.5
PABPC1-221ENST00000522720 H3BNC9 293 aa18.2■□□□□ 0.5
PABPC1-221ENST00000522720 BMP15O95972 392 aa18.2■□□□□ 0.5
PABPC1-221ENST00000522720 GLRA2P23416 452 aa18.2■□□□□ 0.5
PABPC1-221ENST00000522720 CCDC85BQ15834 202 aaPredicted RBP18.2■□□□□ 0.5
PABPC1-221ENST00000522720 PAN2Q504Q3 1202 aaKnown RBP18.2■□□□□ 0.5
PABPC1-221ENST00000522720 PADI6Q6TGC4 694 aa18.2■□□□□ 0.5
PABPC1-221ENST00000522720 IFNLR1Q8IU57 520 aaPredicted RBP18.2■□□□□ 0.5
PABPC1-221ENST00000522720 SLC17A8Q8NDX2 589 aa18.2■□□□□ 0.5
PABPC1-221ENST00000522720 PPM1EQ8WY54 764 aa18.2■□□□□ 0.5
PABPC1-221ENST00000522720 MMTAG2Q9BU76 263 aaKnown RBP18.2■□□□□ 0.5
PABPC1-221ENST00000522720 POLR3FQ9H1D9 316 aaPredicted RBP18.2■□□□□ 0.5
PABPC1-221ENST00000522720 DDX19AQ9NUU7 478 aaKnown RBP18.2■□□□□ 0.5
PABPC1-221ENST00000522720 MTMR6Q9Y217 621 aa18.2■□□□□ 0.5
PABPC1-221ENST00000522720 PIN4Q9Y237 131 aaKnown RBP18.2■□□□□ 0.5
PABPC1-221ENST00000522720 MRPL42Q9Y6G3 142 aaKnown RBP18.2■□□□□ 0.5
PABPC1-221ENST00000522720 MYO7AQ13402 2215 aa18.19■□□□□ 0.5
PABPC1-221ENST00000522720 VWA3AA6NCI4 1184 aa18.19■□□□□ 0.5
PABPC1-221ENST00000522720 EOMESO95936 686 aa18.19■□□□□ 0.5
PABPC1-221ENST00000522720 FGFR1P11362 822 aa18.19■□□□□ 0.5
PABPC1-221ENST00000522720 CTNNB1P35222 781 aa18.19■□□□□ 0.5
PABPC1-221ENST00000522720 RESTQ13127 1097 aa18.19■□□□□ 0.5
PABPC1-221ENST00000522720 CAPSQ13938 189 aa18.19■□□□□ 0.5
PABPC1-221ENST00000522720 PCBP1Q15365 356 aaKnown RBP eCLIP18.19■□□□□ 0.54e-40■■■□□ 17.7
PABPC1-221ENST00000522720 TWF2Q6IBS0 349 aaKnown RBP18.19■□□□□ 0.5
PABPC1-221ENST00000522720 MAEAQ7L5Y9 396 aa18.19■□□□□ 0.5
PABPC1-221ENST00000522720 ZNF598Q86UK7 904 aaKnown RBP18.19■□□□□ 0.5
PABPC1-221ENST00000522720 NFKBIZQ9BYH8 718 aa18.19■□□□□ 0.5
PABPC1-221ENST00000522720 BHMT2Q9H2M3 363 aa18.19■□□□□ 0.5
PABPC1-221ENST00000522720 GPRC5CQ9NQ84 441 aa18.19■□□□□ 0.5
PABPC1-221ENST00000522720 AGPAT5Q9NUQ2 364 aa18.19■□□□□ 0.5
PABPC1-221ENST00000522720 DNM3Q9UQ16 869 aa18.19■□□□□ 0.5
PABPC1-221ENST00000522720 TBKBP1A7MCY6 615 aa18.18■□□□□ 0.5
PABPC1-221ENST00000522720 HOXA2O43364 376 aa18.18■□□□□ 0.5
PABPC1-221ENST00000522720 STX6O43752 255 aa18.18■□□□□ 0.5
PABPC1-221ENST00000522720 ZNF623O75123 536 aa18.18■□□□□ 0.5
PABPC1-221ENST00000522720 EYA4O95677 639 aa18.18■□□□□ 0.5
PABPC1-221ENST00000522720 SKIP12755 728 aa18.18■□□□□ 0.5
PABPC1-221ENST00000522720 HOXA11P31270 313 aaPredicted RBP18.18■□□□□ 0.5
PABPC1-221ENST00000522720 GPM6BQ13491 265 aa18.18■□□□□ 0.5
PABPC1-221ENST00000522720 SF3A1Q15459 793 aaKnown RBP18.18■□□□□ 0.5
PABPC1-221ENST00000522720 HYIQ5T013 277 aa18.18■□□□□ 0.5
PABPC1-221ENST00000522720 MICALL1Q8N3F8 863 aa18.18■□□□□ 0.5
PABPC1-221ENST00000522720 AK8Q96MA6 479 aa18.18■□□□□ 0.5
PABPC1-221ENST00000522720 PLVAPQ9BX97 442 aa18.18■□□□□ 0.5
PABPC1-221ENST00000522720 TMEM117Q9H0C3 514 aa18.18■□□□□ 0.5
PABPC1-221ENST00000522720 RNF19AQ9NV58 838 aa18.18■□□□□ 0.5
PABPC1-221ENST00000522720 A0A0C4DFX4 3053 aa18.18■□□□□ 0.5
PABPC1-221ENST00000522720 ATF7P17544 494 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms