RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 ATP1A1P05023 1023 aaKnown RBP28.24■■■□□ 2.11
COL13A1-214ENST00000522165 TRIM49P0CI25 452 aa28.24■■■□□ 2.11
COL13A1-214ENST00000522165 TRIM49CP0CI26 452 aa28.24■■■□□ 2.11
COL13A1-214ENST00000522165 EDNRBP24530 442 aa28.24■■■□□ 2.11
COL13A1-214ENST00000522165 JAM2P57087 298 aa28.24■■■□□ 2.11
COL13A1-214ENST00000522165 CHMP4BP1P59074 171 aa28.24■■■□□ 2.11
COL13A1-214ENST00000522165 DMP1Q13316 513 aaPredicted RBP28.24■■■□□ 2.11
COL13A1-214ENST00000522165 PAPD7Q5XG87 772 aaKnown RBP28.24■■■□□ 2.11
COL13A1-214ENST00000522165 CYFIP1Q7L576 1253 aa28.24■■■□□ 2.11
COL13A1-214ENST00000522165 RDH13Q8NBN7 331 aa28.24■■■□□ 2.11
COL13A1-214ENST00000522165 AJAP1Q9UKB5 411 aaPredicted RBP28.24■■■□□ 2.11
COL13A1-214ENST00000522165 IGSF9BQ9UPX0 1349 aa28.24■■■□□ 2.11
COL13A1-214ENST00000522165 SOWAHBA6NEL2 793 aa28.23■■■□□ 2.11
COL13A1-214ENST00000522165 CCDC169A6NNP5 214 aa28.23■■■□□ 2.11
COL13A1-214ENST00000522165 SLC18A3Q16572 532 aa28.23■■■□□ 2.11
COL13A1-214ENST00000522165 CBWD6Q4V339 395 aa28.23■■■□□ 2.11
COL13A1-214ENST00000522165 CBWD3Q5JTY5 395 aa28.23■■■□□ 2.11
COL13A1-214ENST00000522165 CBWD5Q5RIA9 395 aa28.23■■■□□ 2.11
COL13A1-214ENST00000522165 TEX35Q5T0J7 233 aa28.23■■■□□ 2.11
COL13A1-214ENST00000522165 SEPT14Q6ZU15 432 aa28.23■■■□□ 2.11
COL13A1-214ENST00000522165 SPIRE2Q8WWL2 714 aa28.23■■■□□ 2.11
COL13A1-214ENST00000522165 HVCN1Q96D96 273 aa28.23■■■□□ 2.11
COL13A1-214ENST00000522165 C17orf75Q9HAS0 396 aa28.23■■■□□ 2.11
COL13A1-214ENST00000522165 SEPT9Q9UHD8 586 aaPredicted RBP28.23■■■□□ 2.11
COL13A1-214ENST00000522165 PUF60Q9UHX1 559 aaKnown RBP28.23■■■□□ 2.11
COL13A1-214ENST00000522165 ANO9A1A5B4 782 aa28.23■■■□□ 2.11
COL13A1-214ENST00000522165 DGAT1O75907 488 aa28.23■■■□□ 2.11
COL13A1-214ENST00000522165 ATG7O95352 703 aa28.23■■■□□ 2.11
COL13A1-214ENST00000522165 INTS8Q75QN2 995 aaKnown RBP28.23■■■□□ 2.11
COL13A1-214ENST00000522165 BSNDQ8WZ55 320 aa28.23■■■□□ 2.11
COL13A1-214ENST00000522165 NTPCRQ9BSD7 190 aaKnown RBP28.23■■■□□ 2.11
COL13A1-214ENST00000522165 CYP26B1Q9NR63 512 aa28.23■■■□□ 2.11
COL13A1-214ENST00000522165 HSPBP1Q9NZL4 362 aa28.23■■■□□ 2.11
COL13A1-214ENST00000522165 TBX20Q9UMR3 447 aa28.23■■■□□ 2.11
COL13A1-214ENST00000522165 BZW2Q9Y6E2 419 aaKnown RBP28.23■■■□□ 2.11
COL13A1-214ENST00000522165 TFRCP02786 760 aaKnown RBP28.22■■■□□ 2.11
COL13A1-214ENST00000522165 KRT13P13646 458 aa28.22■■■□□ 2.11
COL13A1-214ENST00000522165 MOGSQ13724 837 aa28.22■■■□□ 2.11
COL13A1-214ENST00000522165 IQCEQ6IPM2 695 aa28.22■■■□□ 2.11
COL13A1-214ENST00000522165 XXYLT1Q8NBI6 393 aa28.22■■■□□ 2.11
COL13A1-214ENST00000522165 MCPH1Q8NEM0 835 aa28.22■■■□□ 2.11
COL13A1-214ENST00000522165 TRIM58Q8NG06 486 aa28.22■■■□□ 2.11
COL13A1-214ENST00000522165 RABGGTAQ92696 567 aa28.22■■■□□ 2.11
COL13A1-214ENST00000522165 MLXIPQ9HAP2 919 aa28.22■■■□□ 2.11
COL13A1-214ENST00000522165 HDAC6Q9UBN7 1215 aa28.22■■■□□ 2.11
COL13A1-214ENST00000522165 EXOC7Q9UPT5 735 aa28.22■■■□□ 2.11
COL13A1-214ENST00000522165 XKR3Q5GH77 459 aa28.22■■■□□ 2.11
COL13A1-214ENST00000522165 GJB7Q6PEY0 223 aa28.22■■■□□ 2.11
COL13A1-214ENST00000522165 KMT5AQ9NQR1 393 aa28.22■■■□□ 2.11
COL13A1-214ENST00000522165 SYNGAP1Q96PV0 1343 aa28.22■■■□□ 2.11
COL13A1-214ENST00000522165 TACC1O75410 805 aa28.21■■■□□ 2.11
COL13A1-214ENST00000522165 PRKCIP41743 596 aa28.21■■■□□ 2.11
COL13A1-214ENST00000522165 SOX10P56693 466 aa28.21■■■□□ 2.11
COL13A1-214ENST00000522165 MYL7Q01449 175 aa28.21■■■□□ 2.11
COL13A1-214ENST00000522165 PTK2Q05397 1052 aa28.21■■■□□ 2.11
COL13A1-214ENST00000522165 ENOX2Q16206 610 aaKnown RBP28.21■■■□□ 2.11
COL13A1-214ENST00000522165 MAP4K3Q8IVH8 894 aa28.21■■■□□ 2.11
COL13A1-214ENST00000522165 GPR161Q8N6U8 529 aaKnown RBP28.21■■■□□ 2.11
COL13A1-214ENST00000522165 OPTNQ96CV9 577 aa28.21■■■□□ 2.11
COL13A1-214ENST00000522165 KIFC3Q9BVG8 833 aa28.21■■■□□ 2.11
COL13A1-214ENST00000522165 LUC7LQ9NQ29 371 aaKnown RBP28.21■■■□□ 2.11
COL13A1-214ENST00000522165 XPNPEP1Q9NQW7 623 aa28.21■■■□□ 2.11
COL13A1-214ENST00000522165 CAPN6Q9Y6Q1 641 aa28.21■■■□□ 2.11
COL13A1-214ENST00000522165 A0A087X0T9 212 aa28.2■■■□□ 2.11
COL13A1-214ENST00000522165 MAPK13O15264 365 aa28.2■■■□□ 2.11
COL13A1-214ENST00000522165 FAM228BP0C875 321 aa28.2■■■□□ 2.11
COL13A1-214ENST00000522165 ZNF526Q8TF50 670 aaPredicted RBP28.2■■■□□ 2.11
COL13A1-214ENST00000522165 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.2■■■□□ 2.11
COL13A1-214ENST00000522165 ADAMTS1Q9UHI8 967 aa28.2■■■□□ 2.11
COL13A1-214ENST00000522165 MAFBQ9Y5Q3 323 aaPredicted RBP28.2■■■□□ 2.11
COL13A1-214ENST00000522165 SAR1BQ9Y6B6 198 aa28.2■■■□□ 2.11
COL13A1-214ENST00000522165 MOCS3O95396 460 aa28.2■■■□□ 2.1
COL13A1-214ENST00000522165 SLC25A27O95847 323 aa28.2■■■□□ 2.1
COL13A1-214ENST00000522165 RTP1P59025 263 aa28.2■■■□□ 2.1
COL13A1-214ENST00000522165 ZNF571Q7Z3V5 609 aaPredicted RBP28.2■■■□□ 2.1
COL13A1-214ENST00000522165 INTS2Q9H0H0 1204 aaKnown RBP28.2■■■□□ 2.1
COL13A1-214ENST00000522165 R3HDMLQ9H3Y0 253 aa28.2■■■□□ 2.1
COL13A1-214ENST00000522165 ATP6V0A4Q9HBG4 840 aa28.2■■■□□ 2.1
COL13A1-214ENST00000522165 MYH9P35579 1960 aaKnown RBP28.19■■■□□ 2.1
COL13A1-214ENST00000522165 DENND3A2RUS2 1198 aa28.19■■■□□ 2.1
COL13A1-214ENST00000522165 UBA1P22314 1058 aaKnown RBP28.19■■■□□ 2.1
COL13A1-214ENST00000522165 VAMP7P51809 220 aa28.19■■■□□ 2.1
COL13A1-214ENST00000522165 TXNRD2Q9NNW7 524 aa28.19■■■□□ 2.1
COL13A1-214ENST00000522165 ZNF302Q9NR11 478 aa28.19■■■□□ 2.1
COL13A1-214ENST00000522165 SALL4Q9UJQ4 1053 aa28.19■■■□□ 2.1
COL13A1-214ENST00000522165 ATP4AP20648 1035 aa28.19■■■□□ 2.1
COL13A1-214ENST00000522165 DLG4P78352 724 aa28.19■■■□□ 2.1
COL13A1-214ENST00000522165 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.19■■■□□ 2.1
COL13A1-214ENST00000522165 ARMC9Q7Z3E5 817 aa28.19■■■□□ 2.1
COL13A1-214ENST00000522165 ZSWIM2Q8NEG5 633 aa28.19■■■□□ 2.1
COL13A1-214ENST00000522165 CCDC94Q9BW85 323 aaPredicted RBP28.19■■■□□ 2.1
COL13A1-214ENST00000522165 RBPJLQ9UBG7 517 aa28.19■■■□□ 2.1
COL13A1-214ENST00000522165 ANKRD63C9JTQ0 380 aa28.18■■■□□ 2.1
COL13A1-214ENST00000522165 FASTKD5Q7L8L6 764 aaKnown RBP28.18■■■□□ 2.1
COL13A1-214ENST00000522165 ANKRD13CQ8N6S4 541 aa28.18■■■□□ 2.1
COL13A1-214ENST00000522165 EPC1Q9H2F5 836 aa28.18■■■□□ 2.1
COL13A1-214ENST00000522165 JRKLQ9Y4A0 524 aa28.18■■■□□ 2.1
COL13A1-214ENST00000522165 GLTPD2A6NH11 291 aa28.17■■■□□ 2.1
COL13A1-214ENST00000522165 ADSSP30520 456 aa28.17■■■□□ 2.1
COL13A1-214ENST00000522165 MTERF2Q49AM1 385 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms