RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 BCAR1P56945 870 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 FMO1Q01740 532 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 LRP8Q14114 963 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 FGL2Q14314 439 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 DLGAP5Q15398 846 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 EP400NLQ6ZTU2 488 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 FAM47EQ6ZV65 393 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 KDELC2Q7Z4H8 507 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 UBE2Q1Q7Z7E8 422 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 RTN4RL1Q86UN2 441 aaPredicted RBP4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 LCA5Q86VQ0 697 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 IQCA1Q86XH1 822 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 CPOQ8IVL8 374 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 CYP4X1Q8N118 509 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 TCP11L2Q8N4U5 519 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 RNF152Q8N8N0 203 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 RNF214Q8ND24 703 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 APPL2Q8NEU8 664 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 TDRD7Q8NHU6 1098 aaKnown RBP4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 HPS1Q92902 700 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 RILPL2Q969X0 211 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 SLF1Q9BQI6 1058 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 DESI2Q9BSY9 194 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 STK33Q9BYT3 514 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 FOXQ1Q9C009 403 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 SIL1Q9H173 461 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 SSU72Q9NP77 194 aaKnown RBP4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 PLSCR4Q9NRQ2 329 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 KCND1Q9NSA2 647 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 PKD2L1Q9P0L9 805 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 SLC6A14Q9UN76 642 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 ARHGAP26Q9UNA1 814 aa4.5□□□□□ -1.69
RNU4-60P-201ENST00000517239 H7C0S8 307 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 ZNF561-AS1K7EIQ3 104 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 SCDO00767 359 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 FSCN2O14926 492 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 AURKAO14965 403 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 CLGNO14967 610 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 PHGDHO43175 533 aaKnown RBP4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 RNGTTO60942 597 aaKnown RBP4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 HSPA4LO95757 839 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 CYP17A1P05093 508 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 TMEM253P0C7T8 217 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 ZNF865P0CJ78 1059 aaPredicted RBP4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 ZSCAN22P10073 491 aaPredicted RBP4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 KITP10721 976 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 SMPD1P17405 629 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 ALOX12P18054 663 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 SLC7A1P30825 629 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 NTF4P34130 210 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 GRK3P35626 688 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 IL12RB1P42701 662 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 SEPHS1P49903 392 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 CASP6P55212 293 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 NLRP12P59046 1061 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 RAB1AP62820 205 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 CCT2P78371 535 aaKnown RBP4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 MRPS9P82933 396 aaKnown RBP4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 CDK17Q00537 523 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 FOXO1Q12778 655 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 CDC16Q13042 620 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 CNGA2Q16280 664 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 ASIC2Q16515 512 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 IFI16Q16666 785 aaKnown RBP4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 C3orf36Q3SXR2 165 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 GJC2Q5T442 439 aaPredicted RBP4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 MBNL2Q5VZF2 373 aaKnown RBP4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 SPRYD7Q5W111 196 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 E4F1Q66K89 784 aaPredicted RBP4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 CWF19L1Q69YN2 538 aaKnown RBP4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 ESRP1Q6NXG1 681 aaKnown RBP4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 MFSD6Q6ZSS7 791 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 GALNTL5Q7Z4T8 443 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 RPAINQ86UA6 219 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 CDH24Q86UP0 819 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 CXorf67Q86X51 503 aaPredicted RBP4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 ZZZ3Q8IYH5 903 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 CEP57L1Q8IYX8 460 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 CARNMT1Q8N4J0 409 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 ATP11CQ8NB49 1132 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 IL31RAQ8NI17 732 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 MGARPQ8TDB4 240 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 NRG4Q8WWG1 115 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 RFFLQ8WZ73 363 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 KAT5Q92993 513 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 KLHDC7BQ96G42 594 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 SPATA17Q96L03 361 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 LPIN3Q9BQK8 851 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 ADPGKQ9BRR6 497 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 COLEC11Q9BWP8 271 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 CARD10Q9BWT7 1032 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 DHX36Q9H2U1 1008 aaKnown RBP4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 GRPEL1Q9HAV7 217 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 SMURF1Q9HCE7 757 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 ACSS2Q9NR19 701 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 KRT84Q9NSB2 600 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 NDFIP2Q9NV92 336 aa4.49□□□□□ -1.69
RNU4-60P-201ENST00000517239 TBC1D29Q9UFV1 150 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms