RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 RAD51AP2Q09MP3 1159 aa16■□□□□ 0.15
USP11-212ENST00000497179 GIT2Q14161 759 aa16■□□□□ 0.15
USP11-212ENST00000497179 PPP2R5AQ15172 486 aa16■□□□□ 0.15
USP11-212ENST00000497179 TPRNQ4KMQ1 711 aa16■□□□□ 0.15
USP11-212ENST00000497179 PLEKHG4Q58EX7 1191 aa16■□□□□ 0.15
USP11-212ENST00000497179 IFNLR1Q8IU57 520 aaPredicted RBP16■□□□□ 0.15
USP11-212ENST00000497179 CEP57L1Q8IYX8 460 aa16■□□□□ 0.15
USP11-212ENST00000497179 RPUSD2Q8IZ73 545 aaKnown RBP16■□□□□ 0.15
USP11-212ENST00000497179 FMR1NBQ8N0W7 255 aaPredicted RBP16■□□□□ 0.15
USP11-212ENST00000497179 RNF149Q8NC42 400 aa16■□□□□ 0.15
USP11-212ENST00000497179 TMEM40Q8WWA1 233 aa16■□□□□ 0.15
USP11-212ENST00000497179 ZNF668Q96K58 619 aaPredicted RBP16■□□□□ 0.15
USP11-212ENST00000497179 IFT74Q96LB3 600 aa16■□□□□ 0.15
USP11-212ENST00000497179 GDF15Q99988 308 aa16■□□□□ 0.15
USP11-212ENST00000497179 FDXACB1Q9BRP7 624 aaPredicted RBP16■□□□□ 0.15
USP11-212ENST00000497179 NFKBIZQ9BYH8 718 aa16■□□□□ 0.15
USP11-212ENST00000497179 GCOM2Q9BZD3 368 aaPredicted RBP16■□□□□ 0.15
USP11-212ENST00000497179 LRRC27Q9C0I9 530 aa16■□□□□ 0.15
USP11-212ENST00000497179 C17orf75Q9HAS0 396 aa16■□□□□ 0.15
USP11-212ENST00000497179 IFT122Q9HBG6 1241 aa16■□□□□ 0.15
USP11-212ENST00000497179 SERTAD1Q9UHV2 236 aa16■□□□□ 0.15
USP11-212ENST00000497179 SRGAP2CP0DJJ0 459 aa15.99■□□□□ 0.15
USP11-212ENST00000497179 EIF4BP23588 611 aaKnown RBP15.99■□□□□ 0.15
USP11-212ENST00000497179 NAMPTP43490 491 aa15.99■□□□□ 0.15
USP11-212ENST00000497179 PHKA2P46019 1235 aa15.99■□□□□ 0.15
USP11-212ENST00000497179 ZNF131P52739 623 aa15.99■□□□□ 0.15
USP11-212ENST00000497179 EPHB4P54760 987 aa15.99■□□□□ 0.15
USP11-212ENST00000497179 PTENP60484 403 aa15.99■□□□□ 0.15
USP11-212ENST00000497179 UBE2HP62256 183 aa15.99■□□□□ 0.15
USP11-212ENST00000497179 AMPD3Q01432 767 aa15.99■□□□□ 0.15
USP11-212ENST00000497179 CACNB1Q02641 598 aaPredicted RBP15.99■□□□□ 0.15
USP11-212ENST00000497179 FAM160A1Q05DH4 1040 aa15.99■□□□□ 0.15
USP11-212ENST00000497179 LONRF3Q496Y0 759 aa15.99■□□□□ 0.15
USP11-212ENST00000497179 CDCA2Q69YH5 1023 aaPredicted RBP15.99■□□□□ 0.15
USP11-212ENST00000497179 CNNM4Q6P4Q7 775 aa15.99■□□□□ 0.15
USP11-212ENST00000497179 DEFB128Q7Z7B8 93 aa15.99■□□□□ 0.15
USP11-212ENST00000497179 ENGASEQ8NFI3 743 aa15.99■□□□□ 0.15
USP11-212ENST00000497179 DDX12PQ92771 950 aa15.99■□□□□ 0.15
USP11-212ENST00000497179 STAMQ92783 540 aa15.99■□□□□ 0.15
USP11-212ENST00000497179 DNAJC19Q96DA6 116 aa15.99■□□□□ 0.15
USP11-212ENST00000497179 AGO3Q9H9G7 860 aaKnown RBP15.99■□□□□ 0.15
USP11-212ENST00000497179 POLD4Q9HCU8 107 aa15.99■□□□□ 0.15
USP11-212ENST00000497179 NOC2LQ9Y3T9 749 aaKnown RBP15.99■□□□□ 0.15
USP11-212ENST00000497179 LRRIQ4A6NIV6 560 aa15.98■□□□□ 0.15
USP11-212ENST00000497179 TBCAO75347 108 aaKnown RBP15.98■□□□□ 0.15
USP11-212ENST00000497179 PRPF40AO75400 957 aaKnown RBP15.98■□□□□ 0.15
USP11-212ENST00000497179 RPS6KA5O75582 802 aa15.98■□□□□ 0.15
USP11-212ENST00000497179 ZNF202O95125 648 aa15.98■□□□□ 0.15
USP11-212ENST00000497179 PLS3P13797 630 aa15.98■□□□□ 0.15
USP11-212ENST00000497179 CD52P31358 61 aa15.98■□□□□ 0.15
USP11-212ENST00000497179 PAK2Q13177 524 aa15.98■□□□□ 0.15
USP11-212ENST00000497179 SNW1Q13573 536 aaKnown RBP15.98■□□□□ 0.15
USP11-212ENST00000497179 CNKSR3Q6P9H4 555 aa15.98■□□□□ 0.15
USP11-212ENST00000497179 PSRC1Q6PGN9 363 aaPredicted RBP15.98■□□□□ 0.15
USP11-212ENST00000497179 KRBA2Q6ZNG9 492 aa15.98■□□□□ 0.15
USP11-212ENST00000497179 C16orf59Q7L2K0 433 aa15.98■□□□□ 0.15
USP11-212ENST00000497179 DYMQ7RTS9 669 aa15.98■□□□□ 0.15
USP11-212ENST00000497179 SRGAP1Q7Z6B7 1085 aa15.98■□□□□ 0.15
USP11-212ENST00000497179 FAM228AQ86W67 206 aa15.98■□□□□ 0.15
USP11-212ENST00000497179 SEPT8Q92599 483 aa15.98■□□□□ 0.15
USP11-212ENST00000497179 C7orf25Q9BPX7 421 aa15.98■□□□□ 0.15
USP11-212ENST00000497179 IFIH1Q9BYX4 1025 aaKnown RBP15.98■□□□□ 0.15
USP11-212ENST00000497179 TRIM9Q9C026 710 aa15.98■□□□□ 0.15
USP11-212ENST00000497179 INO80BQ9C086 356 aaPredicted RBP15.98■□□□□ 0.15
USP11-212ENST00000497179 C2orf40Q9H1Z8 148 aa15.98■□□□□ 0.15
USP11-212ENST00000497179 ERVK-5Q9HDB9 667 aa15.98■□□□□ 0.15
USP11-212ENST00000497179 FRMD3A2A2Y4 597 aa15.97■□□□□ 0.15
USP11-212ENST00000497179 FAM13AO94988 1023 aa15.97■□□□□ 0.15
USP11-212ENST00000497179 ACRP10323 421 aa15.97■□□□□ 0.15
USP11-212ENST00000497179 LIG1P18858 919 aa15.97■□□□□ 0.15
USP11-212ENST00000497179 NPTX2P47972 431 aa15.97■□□□□ 0.15
USP11-212ENST00000497179 PEX3P56589 373 aa15.97■□□□□ 0.15
USP11-212ENST00000497179 DMP1Q13316 513 aaPredicted RBP15.97■□□□□ 0.15
USP11-212ENST00000497179 TCTN1Q2MV58 587 aa15.97■□□□□ 0.15
USP11-212ENST00000497179 ODR4Q5SWX8 454 aa15.97■□□□□ 0.15
USP11-212ENST00000497179 FAM43BQ6ZT52 329 aaPredicted RBP15.97■□□□□ 0.15
USP11-212ENST00000497179 DBF4BQ8NFT6 615 aa15.97■□□□□ 0.15
USP11-212ENST00000497179 SPIRE2Q8WWL2 714 aa15.97■□□□□ 0.15
USP11-212ENST00000497179 APBB2Q92870 758 aa15.97■□□□□ 0.15
USP11-212ENST00000497179 PAGE5Q96GU1 130 aa15.97■□□□□ 0.15
USP11-212ENST00000497179 MINDY3Q9H8M7 445 aa15.97■□□□□ 0.15
USP11-212ENST00000497179 PARVGQ9HBI0 331 aa15.97■□□□□ 0.15
USP11-212ENST00000497179 LARSQ9P2J5 1176 aaKnown RBP15.97■□□□□ 0.15
USP11-212ENST00000497179 PADI3Q9ULW8 664 aa15.97■□□□□ 0.15
USP11-212ENST00000497179 ADGRA3Q8IWK6 1321 aa15.96■□□□□ 0.15
USP11-212ENST00000497179 SFI1A8K8P3 1242 aa15.96■□□□□ 0.15
USP11-212ENST00000497179 GPR182O15218 404 aa15.96■□□□□ 0.15
USP11-212ENST00000497179 GAP43P17677 238 aa15.96■□□□□ 0.15
USP11-212ENST00000497179 SFPQP23246 707 aaKnown RBP eCLIP15.96■□□□□ 0.15
USP11-212ENST00000497179 BMP8BP34820 402 aa15.96■□□□□ 0.15
USP11-212ENST00000497179 MBTD1Q05BQ5 628 aa15.96■□□□□ 0.15
USP11-212ENST00000497179 PCBP1Q15365 356 aaKnown RBP eCLIP15.96■□□□□ 0.15
USP11-212ENST00000497179 TMEM240Q5SV17 173 aa15.96■□□□□ 0.15
USP11-212ENST00000497179 ZBTB8OSQ8IWT0 167 aa15.96■□□□□ 0.15
USP11-212ENST00000497179 GRAMD1CQ8IYS0 662 aa15.96■□□□□ 0.15
USP11-212ENST00000497179 CNNM3Q8NE01 707 aa15.96■□□□□ 0.15
USP11-212ENST00000497179 DEPTORQ8TB45 409 aa15.96■□□□□ 0.15
USP11-212ENST00000497179 TIGD1Q96MW7 591 aa15.96■□□□□ 0.15
USP11-212ENST00000497179 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.96■□□□□ 0.15
USP11-212ENST00000497179 ARHGAP28Q9P2N2 729 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms