RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 ZDHHC14Q8IZN3 488 aa16.08■□□□□ 0.16
VARS-228ENST00000495010 LINC01465Q8N7H1 131 aa16.08■□□□□ 0.16
VARS-228ENST00000495010 C12orf76Q8N812 135 aaPredicted RBP16.08■□□□□ 0.16
VARS-228ENST00000495010 TMEM105Q8N8V8 129 aa16.08■□□□□ 0.16
VARS-228ENST00000495010 BICD2Q8TD16 824 aa16.08■□□□□ 0.16
VARS-228ENST00000495010 RSPH1Q8WYR4 309 aa16.08■□□□□ 0.16
VARS-228ENST00000495010 ACSF2Q96CM8 615 aaPredicted RBP16.08■□□□□ 0.16
VARS-228ENST00000495010 ZMYND12Q9H0C1 365 aa16.08■□□□□ 0.16
VARS-228ENST00000495010 CHST12Q9NRB3 414 aa16.08■□□□□ 0.16
VARS-228ENST00000495010 CHMP2AO43633 222 aa16.07■□□□□ 0.16
VARS-228ENST00000495010 GAS7O60861 476 aa16.07■□□□□ 0.16
VARS-228ENST00000495010 SKIP12755 728 aa16.07■□□□□ 0.16
VARS-228ENST00000495010 ADD1P35611 737 aaKnown RBP16.07■□□□□ 0.16
VARS-228ENST00000495010 DNM2P50570 870 aa16.07■□□□□ 0.16
VARS-228ENST00000495010 RNASELQ05823 741 aaKnown RBP16.07■□□□□ 0.16
VARS-228ENST00000495010 KRT32Q14532 448 aa16.07■□□□□ 0.16
VARS-228ENST00000495010 TWF2Q6IBS0 349 aaKnown RBP16.07■□□□□ 0.16
VARS-228ENST00000495010 ZNF598Q86UK7 904 aaKnown RBP16.07■□□□□ 0.16
VARS-228ENST00000495010 PPFIBP1Q86W92 1011 aa16.07■□□□□ 0.16
VARS-228ENST00000495010 ZBP1Q9H171 429 aa16.07■□□□□ 0.16
VARS-228ENST00000495010 SMOC2Q9H3U7 446 aa16.07■□□□□ 0.16
VARS-228ENST00000495010 CYP26B1Q9NR63 512 aa16.07■□□□□ 0.16
VARS-228ENST00000495010 FAM217BQ9NTX9 383 aaPredicted RBP16.07■□□□□ 0.16
VARS-228ENST00000495010 USTQ9Y2C2 406 aa16.07■□□□□ 0.16
VARS-228ENST00000495010 HMGB1P09429 215 aaKnown RBP16.06■□□□□ 0.16
VARS-228ENST00000495010 EPCAMP16422 314 aa16.06■□□□□ 0.16
VARS-228ENST00000495010 SFPQP23246 707 aaKnown RBP eCLIP16.06■□□□□ 0.16
VARS-228ENST00000495010 SFNP31947 248 aa16.06■□□□□ 0.16
VARS-228ENST00000495010 CIITAP33076 1130 aa16.06■□□□□ 0.16
VARS-228ENST00000495010 NBL1P41271 181 aa16.06■□□□□ 0.16
VARS-228ENST00000495010 JAK3P52333 1124 aa16.06■□□□□ 0.16
VARS-228ENST00000495010 POLGP54098 1239 aaPredicted RBP16.06■□□□□ 0.16
VARS-228ENST00000495010 GLB1LQ6UWU2 654 aa16.06■□□□□ 0.16
VARS-228ENST00000495010 ASCL5Q7RTU5 278 aa16.06■□□□□ 0.16
VARS-228ENST00000495010 DDX53Q86TM3 631 aaKnown RBP16.06■□□□□ 0.16
VARS-228ENST00000495010 FLCNQ8NFG4 579 aa16.06■□□□□ 0.16
VARS-228ENST00000495010 AUTS2Q8WXX7 1259 aa16.06■□□□□ 0.16
VARS-228ENST00000495010 NKD2Q969F2 451 aaPredicted RBP16.06■□□□□ 0.16
VARS-228ENST00000495010 TEKT3Q9BXF9 490 aa16.06■□□□□ 0.16
VARS-228ENST00000495010 INO80BQ9C086 356 aaPredicted RBP16.06■□□□□ 0.16
VARS-228ENST00000495010 INPP5FQ9Y2H2 1132 aa16.06■□□□□ 0.16
VARS-228ENST00000495010 PRR23AA6NEV1 266 aa16.05■□□□□ 0.16
VARS-228ENST00000495010 ZNF862O60290 1169 aa16.05■□□□□ 0.16
VARS-228ENST00000495010 CSDE1O75534 798 aaKnown RBP16.05■□□□□ 0.16
VARS-228ENST00000495010 CTSAP10619 480 aa16.05■□□□□ 0.16
VARS-228ENST00000495010 PHKA2P46019 1235 aa16.05■□□□□ 0.16
VARS-228ENST00000495010 CLCN5P51795 746 aa16.05■□□□□ 0.16
VARS-228ENST00000495010 LONRF3Q496Y0 759 aa16.05■□□□□ 0.16
VARS-228ENST00000495010 MTERF2Q49AM1 385 aa16.05■□□□□ 0.16
VARS-228ENST00000495010 LRCH2Q5VUJ6 765 aa16.05■□□□□ 0.16
VARS-228ENST00000495010 KANK3Q6NY19 840 aa16.05■□□□□ 0.16
VARS-228ENST00000495010 TMC5Q6UXY8 1006 aa16.05■□□□□ 0.16
VARS-228ENST00000495010 CCDC148Q8NFR7 591 aa16.05■□□□□ 0.16
VARS-228ENST00000495010 IGSF21Q96ID5 467 aa16.05■□□□□ 0.16
VARS-228ENST00000495010 CCDC136Q96JN2 1154 aa16.05■□□□□ 0.16
VARS-228ENST00000495010 RIT2Q99578 217 aa16.05■□□□□ 0.16
VARS-228ENST00000495010 EMILIN2Q9BXX0 1053 aa16.05■□□□□ 0.16
VARS-228ENST00000495010 GBP3Q9H0R5 595 aa16.05■□□□□ 0.16
VARS-228ENST00000495010 SEPT9Q9UHD8 586 aaPredicted RBP16.05■□□□□ 0.16
VARS-228ENST00000495010 PIN4Q9Y237 131 aaKnown RBP16.05■□□□□ 0.16
VARS-228ENST00000495010 IRAK3Q9Y616 596 aa16.05■□□□□ 0.16
VARS-228ENST00000495010 MYO10Q9HD67 2058 aa16.04■□□□□ 0.16
VARS-228ENST00000495010 MSH4O15457 936 aa16.04■□□□□ 0.16
VARS-228ENST00000495010 PRPF3O43395 683 aaKnown RBP16.04■□□□□ 0.16
VARS-228ENST00000495010 RAB27AP51159 221 aa16.04■□□□□ 0.16
VARS-228ENST00000495010 IRX6P78412 446 aaPredicted RBP16.04■□□□□ 0.16
VARS-228ENST00000495010 ADCK5Q3MIX3 580 aa16.04■□□□□ 0.16
VARS-228ENST00000495010 TSGA10IPQ3SY00 556 aa16.04■□□□□ 0.16
VARS-228ENST00000495010 NOMO2Q5JPE7 1267 aa16.04■□□□□ 0.16
VARS-228ENST00000495010 CCDC149Q6ZUS6 474 aa16.04■□□□□ 0.16
VARS-228ENST00000495010 OTOP3Q7RTS5 596 aa16.04■□□□□ 0.16
VARS-228ENST00000495010 MIER3Q7Z3K6 550 aa16.04■□□□□ 0.16
VARS-228ENST00000495010 FRMD5Q7Z6J6 570 aa16.04■□□□□ 0.16
VARS-228ENST00000495010 LPPQ93052 612 aa16.04■□□□□ 0.16
VARS-228ENST00000495010 SFXN1Q9H9B4 322 aa16.04■□□□□ 0.16
VARS-228ENST00000495010 STK39Q9UEW8 545 aa16.04■□□□□ 0.16
VARS-228ENST00000495010 FBXL21Q9UKT6 434 aa16.04■□□□□ 0.16
VARS-228ENST00000495010 ZFHX2Q9C0A1 2572 aaPredicted RBP16.04■□□□□ 0.16
VARS-228ENST00000495010 PLXNA3P51805 1871 aa16.03■□□□□ 0.16
VARS-228ENST00000495010 A0A087WZ62 844 aa16.03■□□□□ 0.16
VARS-228ENST00000495010 ADAMTS3O15072 1205 aa16.03■□□□□ 0.16
VARS-228ENST00000495010 GALTP07902 379 aa16.03■□□□□ 0.16
VARS-228ENST00000495010 KLRC2P26717 231 aa16.03■□□□□ 0.16
VARS-228ENST00000495010 USP11P51784 963 aa16.03■□□□□ 0.16
VARS-228ENST00000495010 UGCGQ16739 394 aa16.03■□□□□ 0.16
VARS-228ENST00000495010 XKR3Q5GH77 459 aa16.03■□□□□ 0.16
VARS-228ENST00000495010 CATSPER4Q7RTX7 472 aa16.03■□□□□ 0.16
VARS-228ENST00000495010 TMEM173Q86WV6 379 aaPredicted RBP16.03■□□□□ 0.16
VARS-228ENST00000495010 RHPN2Q8IUC4 686 aa16.03■□□□□ 0.16
VARS-228ENST00000495010 RASEFQ8IZ41 740 aa16.03■□□□□ 0.16
VARS-228ENST00000495010 URGCPQ8TCY9 931 aa16.03■□□□□ 0.16
VARS-228ENST00000495010 SLC22A17Q8WUG5 538 aa16.03■□□□□ 0.16
VARS-228ENST00000495010 LENG9Q96B70 501 aa16.03■□□□□ 0.16
VARS-228ENST00000495010 PGBD4Q96DM1 585 aa16.03■□□□□ 0.16
VARS-228ENST00000495010 FAM193BQ96PV7 902 aaPredicted RBP16.03■□□□□ 0.16
VARS-228ENST00000495010 FDXACB1Q9BRP7 624 aaPredicted RBP16.03■□□□□ 0.16
VARS-228ENST00000495010 TRAIPQ9BWF2 469 aa16.03■□□□□ 0.16
VARS-228ENST00000495010 UNC45AQ9H3U1 944 aa16.03■□□□□ 0.16
VARS-228ENST00000495010 NRDE2Q9H7Z3 1164 aa16.03■□□□□ 0.16
VARS-228ENST00000495010 FAM105AQ9NUU6 356 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms