RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 CSPP1Q1MSJ5 1256 aa9.3□□□□□ -0.92
APP-216ENST00000491395 LONRF3Q496Y0 759 aa9.3□□□□□ -0.92
APP-216ENST00000491395 PPP4R3AQ6IN85 833 aa9.3□□□□□ -0.92
APP-216ENST00000491395 KCNT2Q6UVM3 1135 aa9.3□□□□□ -0.92
APP-216ENST00000491395 NEK8Q86SG6 692 aa9.3□□□□□ -0.92
APP-216ENST00000491395 RHPN2Q8IUC4 686 aa9.3□□□□□ -0.92
APP-216ENST00000491395 ABI1Q8IZP0 508 aa9.3□□□□□ -0.92
APP-216ENST00000491395 HELQQ8TDG4 1101 aa9.3□□□□□ -0.92
APP-216ENST00000491395 MRPS27Q92552 414 aaKnown RBP9.3□□□□□ -0.92
APP-216ENST00000491395 ZNF558Q96NG5 402 aa9.3□□□□□ -0.92
APP-216ENST00000491395 WRAP73Q9P2S5 460 aaPredicted RBP9.3□□□□□ -0.92
APP-216ENST00000491395 PUF60Q9UHX1 559 aaKnown RBP9.3□□□□□ -0.92
APP-216ENST00000491395 HIDE1A8MVS5 230 aa9.29□□□□□ -0.92
APP-216ENST00000491395 MARCH6O60337 910 aa9.29□□□□□ -0.92
APP-216ENST00000491395 LARGE1O95461 756 aa9.29□□□□□ -0.92
APP-216ENST00000491395 EOMESO95936 686 aa9.29□□□□□ -0.92
APP-216ENST00000491395 GCFC2P16383 781 aaKnown RBP9.29□□□□□ -0.92
APP-216ENST00000491395 XBP1P17861 261 aa9.29□□□□□ -0.92
APP-216ENST00000491395 PHKA2P46019 1235 aa9.29□□□□□ -0.92
APP-216ENST00000491395 ANAPC15P60006 121 aa9.29□□□□□ -0.92
APP-216ENST00000491395 COASYQ13057 564 aa9.29□□□□□ -0.92
APP-216ENST00000491395 NR5A1Q13285 461 aa9.29□□□□□ -0.92
APP-216ENST00000491395 ANKRD1Q15327 319 aa9.29□□□□□ -0.92
APP-216ENST00000491395 EPHA7Q15375 998 aa9.29□□□□□ -0.92
APP-216ENST00000491395 ME3Q16798 604 aa9.29□□□□□ -0.92
APP-216ENST00000491395 DUSP6Q16828 381 aa9.29□□□□□ -0.92
APP-216ENST00000491395 PLPP4Q5VZY2 271 aa9.29□□□□□ -0.92
APP-216ENST00000491395 ZNF410Q86VK4 478 aa9.29□□□□□ -0.92
APP-216ENST00000491395 POTEDQ86YR6 584 aa9.29□□□□□ -0.92
APP-216ENST00000491395 SLC39A11Q8N1S5 342 aa9.29□□□□□ -0.92
APP-216ENST00000491395 LRRC43Q8N309 656 aa9.29□□□□□ -0.92
APP-216ENST00000491395 SMRP1Q8NCR6 262 aa9.29□□□□□ -0.92
APP-216ENST00000491395 LPPQ93052 612 aa9.29□□□□□ -0.92
APP-216ENST00000491395 TMEM143Q96AN5 459 aa9.29□□□□□ -0.92
APP-216ENST00000491395 FAM20AQ96MK3 541 aa9.29□□□□□ -0.92
APP-216ENST00000491395 NLRP4Q96MN2 994 aa9.29□□□□□ -0.92
APP-216ENST00000491395 TCF25Q9BQ70 676 aa9.29□□□□□ -0.92
APP-216ENST00000491395 CYP26B1Q9NR63 512 aa9.29□□□□□ -0.92
APP-216ENST00000491395 CHST12Q9NRB3 414 aa9.29□□□□□ -0.92
APP-216ENST00000491395 DACT1Q9NYF0 836 aa9.29□□□□□ -0.92
APP-216ENST00000491395 SPG21Q9NZD8 308 aa9.29□□□□□ -0.92
APP-216ENST00000491395 RGL1Q9NZL6 768 aa9.29□□□□□ -0.92
APP-216ENST00000491395 LZTS1Q9Y250 596 aa9.29□□□□□ -0.92
APP-216ENST00000491395 USP15Q9Y4E8 981 aaPredicted RBP9.29□□□□□ -0.92
APP-216ENST00000491395 PRR33A8MZF0 331 aa9.28□□□□□ -0.92
APP-216ENST00000491395 NT5C1B-RDH14C9J2C7 533 aa9.28□□□□□ -0.92
APP-216ENST00000491395 ZBTB39O15060 712 aa9.28□□□□□ -0.92
APP-216ENST00000491395 TBX3O15119 743 aa9.28□□□□□ -0.92
APP-216ENST00000491395 P4HBP07237 508 aaKnown RBP9.28□□□□□ -0.92
APP-216ENST00000491395 SFPQP23246 707 aaKnown RBP eCLIP9.28□□□□□ -0.92
APP-216ENST00000491395 PLA2G5P39877 138 aa9.28□□□□□ -0.92
APP-216ENST00000491395 FOSBP53539 338 aa9.28□□□□□ -0.92
APP-216ENST00000491395 CYP4A11Q02928 519 aa9.28□□□□□ -0.92
APP-216ENST00000491395 KRT17Q04695 432 aa9.28□□□□□ -0.92
APP-216ENST00000491395 CTTNQ14247 550 aaKnown RBP9.28□□□□□ -0.92
APP-216ENST00000491395 TWF2Q6IBS0 349 aaKnown RBP9.28□□□□□ -0.92
APP-216ENST00000491395 NCAPH2Q6IBW4 605 aa9.28□□□□□ -0.92
APP-216ENST00000491395 PDE12Q6L8Q7 609 aaKnown RBP9.28□□□□□ -0.92
APP-216ENST00000491395 LLGL2Q6P1M3 1020 aa9.28□□□□□ -0.92
APP-216ENST00000491395 CATSPER4Q7RTX7 472 aa9.28□□□□□ -0.92
APP-216ENST00000491395 TMC7Q7Z402 723 aa9.28□□□□□ -0.92
APP-216ENST00000491395 RNF135Q8IUD6 432 aa9.28□□□□□ -0.92
APP-216ENST00000491395 PRPF31Q8WWY3 499 aaKnown RBP9.28□□□□□ -0.92
APP-216ENST00000491395 WASF1Q92558 559 aa9.28□□□□□ -0.92
APP-216ENST00000491395 TNFRSF25Q93038 417 aa9.28□□□□□ -0.92
APP-216ENST00000491395 FAM122AQ96E09 287 aa9.28□□□□□ -0.92
APP-216ENST00000491395 DYDC2Q96IM9 177 aa9.28□□□□□ -0.92
APP-216ENST00000491395 CEP170P1Q96L14 293 aa9.28□□□□□ -0.92
APP-216ENST00000491395 POP1Q99575 1024 aaKnown RBP9.28□□□□□ -0.92
APP-216ENST00000491395 CDCA3Q99618 268 aaPredicted RBP9.28□□□□□ -0.92
APP-216ENST00000491395 NAP1L4Q99733 375 aaKnown RBP9.28□□□□□ -0.92
APP-216ENST00000491395 JPH2Q9BR39 696 aaPredicted RBP9.28□□□□□ -0.92
APP-216ENST00000491395 LXNQ9BS40 222 aa9.28□□□□□ -0.92
APP-216ENST00000491395 INO80BQ9C086 356 aaPredicted RBP9.28□□□□□ -0.92
APP-216ENST00000491395 NGRNQ9NPE2 291 aaKnown RBP9.28□□□□□ -0.92
APP-216ENST00000491395 ENTPD7Q9NQZ7 604 aa9.28□□□□□ -0.92
APP-216ENST00000491395 BMP2KQ9NSY1 1161 aaPredicted RBP9.28□□□□□ -0.92
APP-216ENST00000491395 MUTYHQ9UIF7 546 aa9.28□□□□□ -0.92
APP-216ENST00000491395 PIN4Q9Y237 131 aaKnown RBP9.28□□□□□ -0.92
APP-216ENST00000491395 HCN4Q9Y3Q4 1203 aa9.28□□□□□ -0.92
APP-216ENST00000491395 EVPLQ92817 2033 aa9.27□□□□□ -0.92
APP-216ENST00000491395 MEIS3P2A8K0S8 358 aa9.27□□□□□ -0.93
APP-216ENST00000491395 LOC730098B7Z3J9 87 aa9.27□□□□□ -0.93
APP-216ENST00000491395 JAK2O60674 1132 aa9.27□□□□□ -0.93
APP-216ENST00000491395 DKC1O60832 514 aaKnown RBP eCLIP9.27□□□□□ -0.93
APP-216ENST00000491395 SEC24BO95487 1268 aa9.27□□□□□ -0.93
APP-216ENST00000491395 SRGAP2CP0DJJ0 459 aa9.27□□□□□ -0.93
APP-216ENST00000491395 YWHABP31946 246 aaKnown RBP9.27□□□□□ -0.93
APP-216ENST00000491395 PPM1AP35813 382 aa9.27□□□□□ -0.93
APP-216ENST00000491395 KRT2P35908 639 aa9.27□□□□□ -0.93
APP-216ENST00000491395 TECP42680 631 aa9.27□□□□□ -0.93
APP-216ENST00000491395 NEK4P51957 841 aa9.27□□□□□ -0.93
APP-216ENST00000491395 POLGP54098 1239 aaPredicted RBP9.27□□□□□ -0.93
APP-216ENST00000491395 BCAR1P56945 870 aa9.27□□□□□ -0.93
APP-216ENST00000491395 SPIRE1Q08AE8 756 aa9.27□□□□□ -0.93
APP-216ENST00000491395 LAMTOR4Q0VGL1 99 aa9.27□□□□□ -0.93
APP-216ENST00000491395 KCNC3Q14003 757 aa9.27□□□□□ -0.93
APP-216ENST00000491395 XKR9Q5GH70 373 aa9.27□□□□□ -0.93
APP-216ENST00000491395 TPH2Q8IWU9 490 aa9.27□□□□□ -0.93
APP-216ENST00000491395 C4orf19Q8IY42 314 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 265.8 ms